KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:07 2014 Check: 00 .. Name: ENSP00000215855/1-211 Len: 211 Check: 4016 Weight: 1.00 Name: ENSBTAP00000001656/1-211 Len: 211 Check: 3222 Weight: 1.00 Name: bmy_17854T0/1-154 Len: 211 Check: 3322 Weight: 1.00 Name: BACU020454/1-211 Len: 211 Check: 3291 Weight: 1.00 Name: ENSTTRP00000015647/1-211 Len: 211 Check: 2244 Weight: 1.00 // 1 50 ENSP00000215855/1-211 MAEQHGAPEQ AAAGKSHGDL GGSYKVILYE LENFQGKRCE LSAECPSLTD ENSBTAP00000001656/1-211 MAEQHSTPEQ AAAGKSHGGL GGSYKVIVYE MENFQGKRCE LTAECPNLTE bmy_17854T0/1-154 MAEQRSAPEQ AAAGKGHGGL GGSYKVIVYE MENFQGKRCE LSAECPNLTE BACU020454/1-211 MAEQHSAPEQ AAAGKSHGGL GGVYKVIVYE MENFQGKRCE LSAECPNLTE ENSTTRP00000015647/1-211 MAEQHGAPEQ AAAGKSHGGL GGAYKVIVYE MENFQGKRCE LSAECPNLTE 51 100 ENSP00000215855/1-211 SLLEKVGSIQ VESGPWLAFE SRAFRGEQFV LEKGDYPRWD AWSNSRDSDS ENSBTAP00000001656/1-211 SLLEKVGSIQ VESGPWLAFE RRAFRGEQYV LEKGDYPRWD AWSNSHHSDS bmy_17854T0/1-154 SLLEKVGSIQ VE---WLAFE RRAFRGEQYV LEKGDYPRWD AWSNSHRSDS BACU020454/1-211 SLLEKVGSIQ VESGPWLAFE RRAFRGEQYV LEKGDYPRWD AWSNSHRSDS ENSTTRP00000015647/1-211 SLLEKVGSIQ VESGPWLAFE RRAFRGEQYV LEKGDYPRWD AWSNSHRGDS 101 150 ENSP00000215855/1-211 LLSLRPLNID SPHHKLHLFE NPAFSGRKME IVDDDVPSLW AHGFQDRVAS ENSBTAP00000001656/1-211 LLSLRPLHID GPDHKLHLFE NPAFGGRKME IVDDDVPSLW AHGFQDRVAS bmy_17854T0/1-154 LLSLRPLQID GPDHKLHLFE NPAFSGRKME IVDDDVPSLW AHGFQDRVAS BACU020454/1-211 LLSLRPLQID GPDHKLHLFE NPAFGGRKME IVDDDVPSLW AHGFQDRVAS ENSTTRP00000015647/1-211 LLSLRPLQID GPDHKLHLFE NPAFGGRKME IVDDDVPSLW AHGFQDRVAS 151 200 ENSP00000215855/1-211 VRAINGTWVG YEFPGYRGRQ YVFERGEYRH WNEWDASQPQ LQSVRRIRDQ ENSBTAP00000001656/1-211 VRAINGTWVG YEFPGYRGRQ YVFERGEYRH WNEWDANQPQ LQSVRRIRDQ bmy_17854T0/1-154 VRAINGT--- ---------- ---------- ---------- ---------- BACU020454/1-211 VRAINGTWVG YEFPGYRGRQ YVFERGEYRH WNEWDANQPQ LQSVRRIRDQ ENSTTRP00000015647/1-211 VRAINGTWVG YEFPGYRGRQ YVFERGEYRH WNEWDANQPQ LQSVRRIRDQ 201 250 ENSP00000215855/1-211 KWHKRGRFPS S ENSBTAP00000001656/1-211 KWHKRGVFLS S bmy_17854T0/1-154 ---------- - BACU020454/1-211 KWHKRGCFLS S ENSTTRP00000015647/1-211 KWHKRGCFLS S