KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:15:09 2014 Check: 00 .. Name: bmy_11080T0/1-410 Len: 536 Check: 3311 Weight: 1.00 Name: ENSP00000232003/1-525 Len: 536 Check: 9896 Weight: 1.00 Name: ENSBTAP00000001667/1-536 Len: 536 Check: 6586 Weight: 1.00 Name: ENSTTRP00000015960/1-481 Len: 536 Check: 1436 Weight: 1.00 // 1 50 bmy_11080T0/1-410 MKLLTAALFF ILLIPLQRSC AVSPTGCDAA EPVAGKALDL INKGWWDGYL ENSP00000232003/1-525 MKALIAAL-- -LLITLQYSC AVSPTDCSAV EPEAEKALDL INKRRRDGYL ENSBTAP00000001667/1-536 MKVLTAALLS ILLITQQCSC AVNPTGCDAV EPVAVRALDL INKGRWDGYL ENSTTRP00000015960/1-481 MKLLTAALFF ILLIPLQHSC AVSPTGCDAA EPVAGKALDL INKGRWDGYL 51 100 bmy_11080T0/1-410 FQLLRVTDVH LDK-GSTAVY YLVLDVKETD CSVLSRKHWD DCEPAVSIRP ENSP00000232003/1-525 FQLLRIADAH LDRVENTTVY YLVLDVQESD CSVLSRKYWN DCEPPDSRRP ENSBTAP00000001667/1-536 FQLLRVADAH LDKVESIAVY YLVLDVKESD CPVLSRKHWD DCELDVSRRP ENSTTRP00000015960/1-481 FQLLWVADVH LDKMGSTAV- YLVLDVKESD CSVLSRKHWA DGEPTVSIRP 101 150 bmy_11080T0/1-410 SDIVIGQCKV IAITRLDGSQ NLRVNDFNCT TSSAANYFLQ SLWHWSILK- ENSP00000232003/1-525 SEIVIGQCKV IATRHSHESQ DLRVIDFNCT TSSVSSALAN TKDSPVLIDF ENSBTAP00000001667/1-536 SETVIGQCKV IAITLLAGPE DLRVNDFNCT TSSVSSALTN TIDSPVLFDF ENSTTRP00000015960/1-481 SEIVIGQCKV IAITLSDGSQ NLRVNDFNCT TSSVSSALVN TKDSPVLSNV 151 200 bmy_11080T0/1-410 ---TAQYSQI SLRILSSTE- ---------- NKLTKPWRST KRENDLWIL- ENSP00000232003/1-525 FEDTERYRKQ ANKALEKYKE ENDDFASFRV DRIERVARVR GGEGTGYFVD ENSBTAP00000001667/1-536 FEDTELYRKQ AEKALEKYQR ENSDFAPFRV DKVKRAMRAR GGEGTSYFLD ENSTTRP00000015960/1-481 FADTELYRKQ ADKALEKYKK ENGDFASFRV DKVKRVARVR GGERTNYYLD 201 250 bmy_11080T0/1-410 ---------- ---------- -QSRFVFDVE DSDLETPKDI VINCEVFNLK ENSP00000232003/1-525 FSVRNCPRHH FPRHPNVFGF CRADLFYDVE ALDLESPKNL VINCEVFDPQ ENSBTAP00000001667/1-536 FSVRNCSSHH FPRHSHIFGF CRADLFYDVE ASDLETPKDI VTNCEVFNLK ENSTTRP00000015960/1-481 FSVRNCSSHH FPRHSHIFGF CRADLSYDVE DSDLETPKDI VINCEVFNLK 251 300 bmy_11080T0/1-410 EHTNISGVKH RLGLPLHSGE HEHAPAGRPS FKPNGSRDHH NPHESHNFRC ENSP00000232003/1-525 EHENINGVPP HLGHPFHWGG HERSSTTKPP FKPHGSRDHH HPHKPHEHGP ENSBTAP00000001667/1-536 EHRNFSAVQH HLGRPFHSGE HEHSPAGRPP FKPSGSKDHG HPHESYNFRC ENSTTRP00000015960/1-481 EH--ISGVKQ RLGHALHSGE H--SPAGRTP FKPNGSRDHH NPHESHNFRC 301 350 bmy_11080T0/1-410 PPPLEDKNYS D------RVP LPLPPPGSRA ITLLLTPVGP MGPLIIIVLV ENSP00000232003/1-525 PPPPDERDHS HGPPLPQGPP PLLPMSCSSC QHATFGTNGA QRHSHNNNSS ENSBTAP00000001667/1-536 PPPLEHKNHS DSPPFQARAP LPFPPPGLRC PHPPFGTKGN HRPPHDHSSD ENSTTRP00000015960/1-481 PPPLEDKNYS DSPPF-VGVP LPLPPPGSRC HHPHFDTSGT HGPPHNHSSG 351 400 bmy_11080T0/1-410 SA-------- ---------- ---------- ---------- ---------- ENSP00000232003/1-525 DLHPHKHHSH EQHPHGHHPH AHHPHEHDTH RQHPHGHHPH GHHPHGHHPH ENSBTAP00000001667/1-536 EHHPHGHHPH GHHPHGHHPH GHHPHGHQPH GHHPHGHHPH GHHPHGHHPH ENSTTRP00000015960/1-481 EHYPHTHRPH SHHPHGHHPH GH-------- ---------- ---------- 401 450 bmy_11080T0/1-410 ---------- -------ILT DTIPMDIVPM NTIPMAMISM TMDPVTHHPI ENSP00000232003/1-525 GHHPHGHHPH CH-----DFQ DYGPCDPPPH NQG---HCCH GHGPPPGHLR ENSBTAP00000001667/1-536 GHHPYGHHPH GHHPHDNDFY DHGPCDPPPH RQDPQDHHRQ GRDPPPRHSK ENSTTRP00000015960/1-481 ---------- -------DFY DHGPCDPPPH SQGPQDHHRR GHGPPPRHSE 451 500 bmy_11080T0/1-410 AKVPKTTITE AMAHHLGTQK --KDVQKGEV LPLPEASFPS FSLPNHNNLL ENSP00000232003/1-525 RRGPGKGPRP FHCRQIGSVY RLPPLRKGEV LPLPEANFPS FPLPHHKHPL ENSBTAP00000001667/1-536 ERGPGKGHFR FHWRPTGYIH RLPSLKKGEV LPLPEANFPS FSLPNHNNPL ENSTTRP00000015960/1-481 ERGPGKG--- FHWRQIEYVH -LPPLNTGEV LPLPEANFPS FSLPNHNNPL 501 550 bmy_11080T0/1-410 QPEIQAFPQS ASESCPGEFK N--------- ------ ENSP00000232003/1-525 KPDNQPFPQS VSESCPGKFK SGFPQVSMFF THTFPK ENSBTAP00000001667/1-536 QPEIQAFPQS ASESCPGTFN IKFLHISKFF AYTLPK ENSTTRP00000015960/1-481 QPEIQAFPQS ASESCPGEFK NEFLQISKFF AYTVLK