KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:18 2014 Check: 00 .. Name: ENSP00000310721/1-506 Len: 670 Check: 4772 Weight: 1.00 Name: ENSBTAP00000001710/1-505 Len: 670 Check: 5346 Weight: 1.00 Name: ENSTTRP00000001734/1-510 Len: 670 Check: 7826 Weight: 1.00 Name: bmy_01346T0/1-658 Len: 670 Check: 9612 Weight: 1.00 Name: BACU002294/1-465 Len: 670 Check: 5042 Weight: 1.00 // 1 50 ENSP00000310721/1-506 MAGEVSAATG RFSLE----- RLGLPGLALA AALLLLALCL LVRRT----- ENSBTAP00000001710/1-505 --------MG GFWPEPWLTR SLGYPGLALA AALLLLVLCL NARRT----- ENSTTRP00000001734/1-510 TAEDVAAGMG SFSLEPWLPR PLSPPGLVLA AALLLLVLYL HARRT----- bmy_01346T0/1-658 --------MG SFSPEPWLPR PLSPSGLVLA AALLLLVLCL RARRTRGSFQ BACU002294/1-465 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000310721/1-506 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001710/1-505 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001734/1-510 ---------- ---------- ---------- ---------- ---------- bmy_01346T0/1-658 RVTDDKIHAG QTAFPDASPL CGATMCPFPE SRGDVLTCSD WSQGGGDADP BACU002294/1-465 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000310721/1-506 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001710/1-505 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001734/1-510 ---------- ---------- ---------- ---------- ---------- bmy_01346T0/1-658 ERCRKSLKLQ STVCKSNSKK WNDAVACFEI LRKIVNEDRQ ELIDKGQVQP BACU002294/1-465 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000310721/1-506 RRPGEPPLIK GWLPYLGVVL NLRKDPLRFM KTLQKQHGDT FTVLLGGKYI ENSBTAP00000001710/1-505 RRPGEPPLIK GWLPYFGQAL KLQKDPLGFM TSLQKQYGDI FTLLLGGKYI ENSTTRP00000001734/1-510 RRPGEPPLIK GWLPYFGEAL KLQKDPLGFM TTLQKQYGDV FTLFLGGNYI bmy_01346T0/1-658 RRPGEPPLIK GWLPYFGEAL KLQKDPLGFM TTLQKQYGDV FTLFLGGNYI BACU002294/1-465 RRPGEPPLIK GWLPYFGEAL KLQKDPLGFM TTLQKQRGDV FTLFLGGNYI 201 250 ENSP00000310721/1-506 TFILDPFQYQ LVIKNHKQLS FRVFSNKLLE KAFSISQLQK NHDMNDELHL ENSBTAP00000001710/1-505 TFILDPFHYT SVAKNQK-LS FQIFTNKFLK RVFSIKKMLT DSDLIDEIHS ENSTTRP00000001734/1-510 TFILDPFQYQ SVVKNQK-LS FQMFTSKFLM RVFSVKKMMT YHDLNDKIHT bmy_01346T0/1-658 TFILDPFQYQ SVVKNQK-LS FRMFTSKFLM RVFSVKKMMT YHDLNDKIHT BACU002294/1-465 TFILDPFQYQ SVVKNQK-LS FQMFTSKFLM RVFSVKKMMT YHDLNDKIHT 251 300 ENSP00000310721/1-506 CYQFLQGKSL DILLESMMQN LKQVFEPQLL KTTSWDTAEL YPFCSSIIFE ENSBTAP00000001710/1-505 TYQFLQGKHL DILMESTMQN LKQVFEPQLL KTTSWSTEYL LPFCNSVIFE ENSTTRP00000001734/1-510 SYQLLRGKHL DTLMENTMQT LKQVFEPQLL KTTSWDTEYL LTFCSSVIFE bmy_01346T0/1-658 SYQLLRGKHL DALMENTMQT LKQVFEPQFL KTTSWDTEYL LTFCSSVIFE BACU002294/1-465 SYQLLRGKHL DALMENTMQT LKQVFEPQFL KTTSWDTEYL LTFCSSVIFE 301 350 ENSP00000310721/1-506 ITFTTIYGKV IVCDNNKFIS ELRDDFLKFD DKFAYLVSNI PIELLGNVKS ENSBTAP00000001710/1-505 MTFTTIYGNI LADDKKTFIT ELKDDFLKFD EKFTRLASGI PIELLGNIKS ENSTTRP00000001734/1-510 VTFTAIHGNV LSGDRKTFMT ELRDDFFKFD GKFTHLASGI PIELLGNIKS bmy_01346T0/1-658 VTFTTIHGNV LAGDRKTFIT ELRDDFFKFD SKFTHLASGI PIELLGNIKS BACU002294/1-465 VTFTAIHGNV LAGDRKTFIT ELRDDFFKFD SKFTHLASGV PIELLGNIKS 351 400 ENSP00000310721/1-506 IREKIIKCFS SEKLAKMQGW SEVFQSRQDV LEKYYVHEDL EIGAHHLGFL ENSBTAP00000001710/1-505 VRTKLIKDLT IESLAKLQGM SEVVQRRNDI LEKYYTPKDT EIGAHHLGLL ENSTTRP00000001734/1-510 IRTKLIKQLT TENLAKLQGW SEVVQMRQDI LEKYYTPKDT EIGAHHLGLL bmy_01346T0/1-658 IRTKLIKQLT TENLAKLQGW SEVVQMRQDI LEKYYTPKDT EIGAHHLGLL BACU002294/1-465 IRTKLIKQLT TENLAKLQGW SEVVQMRQDI LEKYYTPKDT EIGAHHLGLL 401 450 ENSP00000310721/1-506 WASVANTIPT MFWAMYYLLR HPEAMAAVRD EIDRLLQSTG QKKGSGFPIH ENSBTAP00000001710/1-505 WASVTNTVPT MFWAMYYLLR NPKAMAVLRD EIDHLLQSTG QKKGPGFSIY ENSTTRP00000001734/1-510 WASVSNTVPT MFWTMYYLLR HPEAMAVLRD EIDHLLQSTG QKKGPGFSIH bmy_01346T0/1-658 WASVSNTVPT MFWTMYYLLR HPEAMAVLRD EIDHLLQSTG QKKGPGFSIH BACU002294/1-465 WASVSNTVPT MFWTMYYLLR HPEAMAVLRD EIDHLLQSTG QKKGPGFSIH 451 500 ENSP00000310721/1-506 LTREQLDSLI CL-------- ---------- ---------- ---------- ENSBTAP00000001710/1-505 LTREQLDSLV YL-------- ---------- ---------- ---------- ENSTTRP00000001734/1-510 LTREQLDSLV YL-------- ---------- ---------- ---------- bmy_01346T0/1-658 LTREQLDSLV YLGNLFLSVM KKRRATEAPL SFVDNNATHY FCPPMILSMI BACU002294/1-465 LTREQLDSLV YL-------- ---------- ---------- ---------- 501 550 ENSP00000310721/1-506 ---------- ---ESSIFEA LRLSSYSTTI RFVEEDLTLS SETGDYCVRK ENSBTAP00000001710/1-505 ---------- ---ESTILEV LRLCSFSGIF RFVQEDLTLH LESQDCCLRK ENSTTRP00000001734/1-510 ---------- ---ESTILEV LRLCSFSGIF RVVQEDLTLH LESQDCCLRK bmy_01346T0/1-658 AAIQSQPRLA HITESTVLEV LRLCSFSGIF RVVQEDLTLH LESQDCCLRK BACU002294/1-465 ---------- ---ESTILEA LRLCSFSGIF RVVQEDLTLH LGSQDCCLRK 551 600 ENSP00000310721/1-506 GDLVAIFPPV LHGDPEIFEA PEEFRYDRFI EDGKKKTTFF KRGKKLKCYL ENSBTAP00000001710/1-505 GDFVVIFPPI LHHDPEIFEA PDEFRFDRFT ENGKKKTTFF KRGKKLKYYH ENSTTRP00000001734/1-510 GDFVGIFPPV LHYDPEIFEA PEEFRFDRFT ESGKKKTTFF KRGKKLKYYH bmy_01346T0/1-658 GDFVGIFPPV LHYDPEIFEA PEEFRFDRFT ESGKKKTTFF KRGKKLKYYH BACU002294/1-465 GDFVGIFPPV LHYDPEIFEA PEEFRFDRFT ESGKKKTTFF KRGKKLKYYH 601 650 ENSP00000310721/1-506 MPFGTGTSKC PGRFFALMEI KQLLVILLTY FDLEIIDDKP IGLNYSRLLF ENSBTAP00000001710/1-505 LPFGLGVSKC PGRFLAMVEI KQLLVVLLTY FDLEIIDNKP LELNYSRFLF ENSTTRP00000001734/1-510 MPFGFGVSKC PGRFLAIVEI KQLLVVFLTY FDSEIIDDKP LELNYNRFLF bmy_01346T0/1-658 MPFGFGVSKC PGRFLAIVEI KQLLVVFLTY FDLEIIDDKP LELNYNRFLF BACU002294/1-465 MPFGFGVSKC PGRFLAIVEI KQLLVVFLTY FDLEIIDDKP LELNYNRFLF 651 700 ENSP00000310721/1-506 GIQYPDSDVL FRYKVKS--- ENSBTAP00000001710/1-505 GIPYPDSDVL FRYKIKSWLS ENSTTRP00000001734/1-510 GIQYPDSDVL FRYKVKS--- bmy_01346T0/1-658 GIQYPDSDVL FRYKVKS--- BACU002294/1-465 GIQYPDSDVL FRYKVKS---