KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:18 2014 Check: 00 .. Name: ENSP00000384126/1-662 Len: 887 Check: 6980 Weight: 1.00 Name: ENSBTAP00000001716/1-662 Len: 887 Check: 5542 Weight: 1.00 Name: ENSTTRP00000012613/1-661 Len: 887 Check: 560 Weight: 1.00 Name: BACU012501/1-663 Len: 887 Check: 2844 Weight: 1.00 Name: bmy_01302T0/1-886 Len: 887 Check: 7976 Weight: 1.00 // 1 50 ENSP00000384126/1-662 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001716/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012613/1-661 ---------- ---------- ---------- ---------- ---------- BACU012501/1-663 ---------- ---------- ---------- ---------- ---------- bmy_01302T0/1-886 MAAVWGTPSV ATPGPAKGHF LPRSAPPSPL LFPRLIAAAP TAGEIGARPD 51 100 ENSP00000384126/1-662 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001716/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012613/1-661 ---------- ---------- ---------- ---------- ---------- BACU012501/1-663 ---------- ---------- ---------- ---------- ---------- bmy_01302T0/1-886 FLCGPAAARA TRPPGPRGAT NCTCGGPGRP GWYSASLATP LHPRPFIPPS 101 150 ENSP00000384126/1-662 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001716/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012613/1-661 ---------- ---------- ---------- ---------- ---------- BACU012501/1-663 ---------- ---------- ---------- ---------- ---------- bmy_01302T0/1-886 STRPFPVRVS VSRKSFTPSR VPDKPSHTGA CRPGARTPRL GLGGGAWWGG 151 200 ENSP00000384126/1-662 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001716/1-662 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012613/1-661 ---------- ---------- ---------- ---------- ---------- BACU012501/1-663 ---------- ---------- ---------- ---------- ---------- bmy_01302T0/1-886 SAGEVFKLEP EPPSRGSGSR GAVERPCASS GRDPGVWRGV GREGQVCAKC 201 250 ENSP00000384126/1-662 ---------- -----MRPQI LLLLALLTLG LA-AQHQDKV PCKMVDKKVS ENSBTAP00000001716/1-662 ---------- -----MSHQI LLLLAVLTLG LATSQHRDKV PCRKVDKEVW ENSTTRP00000012613/1-661 ---------- -----MSHRI LLLLAVLTLG LATSQHRDKV PCKKVDKEVL BACU012501/1-663 ---------- -----MSHRI LLLLAVLTLG LATSQHQDKV PCKKVDKEVL bmy_01302T0/1-886 AGAARERSGG RAEPAMSHRI LLLLAVLTLG LATSQHRDKV PCKKVDKEVL 251 300 ENSP00000384126/1-662 CQVLGLLQVP SVLPPDTETL DLSGNQLRSI LASPLGFYTA LRHLDLSTNE ENSBTAP00000001716/1-662 CQGRGLLQVP SVLSRDIEVL NLSRNQLRSI LALPLGFYTA LRHLDLSANE ENSTTRP00000012613/1-661 CRGLGLLQVP SVLPRDIEVL DLSGNQLRSI LASPLGLYTA LLHLDLSANE BACU012501/1-663 CRGLGLLQVP SVLPRDIEVL DLSGNQLRSI LASPLGFYTA LLHLDLSANE bmy_01302T0/1-886 CRGLGLLQVP SVLPRDIEVL DLSGNQLRSI LASPLGFYTA LLHLDLSANE 301 350 ENSP00000384126/1-662 ISFLQPGAFQ ALTHLEHLSL AHNRLAMATA LSAGGLGPLP RVTSLDLSGN ENSBTAP00000001716/1-662 ISFLQPGVFQ ALPHLEHLNL AHNHLAVGTA LNTGGLGPLL HLTSLDLSGN ENSTTRP00000012613/1-661 ISFLQPGVFQ ALPHLEHLNL AHNRLAVGTA LSTGGLGPLP HLTSLDLSGN BACU012501/1-663 ISFLQPGVFQ ALPHLEHLNL AHNRLAVGTA LSTGGLGPLP HLTSLDLSGN bmy_01302T0/1-886 ISFLQPGVFQ ALPHLEHLNL AHNRLAVGTA LSTGGLGPLP HLTSLDLSGN 351 400 ENSP00000384126/1-662 SLYSGLLERL LGEAPSLHTL SLAENSLTRL TRHTFRDMPA LEQLDLHSNV ENSBTAP00000001716/1-662 SLYSGLVEQL LGEAPALRTL SLAENSLTRL GRRTFLSTPA LERLDLHSNV ENSTTRP00000012613/1-661 SLYSGLAERL LAEAPALRSL SLAQNSLTRL GRHTFWGTPA LERLDLHSNV BACU012501/1-663 SLYSGLAERL LAEAPALRSL SLAENSLTRL GRHTFWGTPA LERLDLHSNV bmy_01302T0/1-886 SLYSGLAERL LAEAPALRSL SLAENSLTRL GRHTFWGTPX LERLDLHSNV 401 450 ENSP00000384126/1-662 LMDIEDGAFE GLPRLTHLNL SRNSLTCISD FSLQQLRVLD LSCNSIEAFQ ENSBTAP00000001716/1-662 LMDIEDGAFE ALPRLVHLNL SRNSLTCISD FSLQQLRVLD LSCNSIEAFQ ENSTTRP00000012613/1-661 LMDIEDGAFE ALPHLAHLNL SRNSLTCISD FSLQQLRVLD LSC-SIEAFQ BACU012501/1-663 LMDIEDGAFE ALPHLAHLNL SRNSLTCISD FSLQQLRVLD LSCNSIEAFQ bmy_01302T0/1-886 LMDIEDGAFE ALPHLAHLNL SRNSLTCISD FSLQQLRVLD LSCNSIEAFQ 451 500 ENSP00000384126/1-662 TASQPQAEFQ LTWLDLRENK LLHFPDLAAL PRLIYLNLSN NLIRLPTGPP ENSBTAP00000001716/1-662 TA-EPRAEYQ LAWLDLRENK LLHFPDLSAL PRLIYLNASN NLIRLPAEPP ENSTTRP00000012613/1-661 TA-RSRAQYQ LAWLDLRENK LLHFPDLAAL PRLIYLNVSN NLIRLPAGPP BACU012501/1-663 TAPEPRAQYQ LAWLDLRENK LLHFPDLAAL PRLIFLNVSN NLIRLPAGPP bmy_01302T0/1-886 TAPEPRAQYQ LAWLDLRENK LLHFPDLAAL PRLIYLNVSN NLIRLPAGPP 501 550 ENSP00000384126/1-662 QDS-KGIHAP SEGWSALPLS APSGNASGRP LSQLLNLDLS YNEIELIPDS ENSBTAP00000001716/1-662 RGGAEGLHAP SEGWSSLPLS NPSRNTSTQP LSQLLNLDLS YNEIELVPEG ENSTTRP00000012613/1-661 QGG-EGLHAP SEGWSALPFS HPGRNASTQP LSQLLNLDLS YNEIELVPEG BACU012501/1-663 QGG-EGLHAP SEGWSALPFS NLGRNASTQP LSQLLNLDLS YNEIELVPEG bmy_01302T0/1-886 QGG-EGLHAP SEGWSALPFS NPGRNASTQP LSQLLNLDLS YNEIELVPEG 551 600 ENSP00000384126/1-662 FLEHLTSLCF LNLSRNCLRT FEARRLGSLP CLMLLDLSHN ALETLELGAR ENSBTAP00000001716/1-662 FLEPLTSLRS LNLSRNCLRA FEAQP-GSLP CLTLLDISHN ALETLELGAR ENSTTRP00000012613/1-661 FLEHLTSLRF LNLSRNCLRA FEARRVGSLP CLALLDMSHN ALETLELGAR BACU012501/1-663 FLEHLTSLRF LNLSRNCLRA FEARHVGSLP CLVLLDMSHN ALETLELGAR bmy_01302T0/1-886 FLEHLTSLRF LNLSRNCLRA FEARRVGSLP CLALLDMSHN ALETLELGAR 601 650 ENSP00000384126/1-662 ALGSLRTLLL QGNALRDLPP YTFANLASLQ RLNLQGNRVS PCGGPDEPGP ENSBTAP00000001716/1-662 ALGSLRTLLL QDNALRDLPL YTFTSLASLQ RLNLQGNRLS PCGGPAEPGP ENSTTRP00000012613/1-661 ALGSLQTLLL QDNALRDLPP YTFAGLASLQ RLNLQGNRVS PCGGPGEPGP BACU012501/1-663 ALGSLQTLLL QDNALRGLPP YTFAGLASLQ RLNLHGNRVS PCGGPGEPGP bmy_01302T0/1-886 ALGSLQTLLL QDNALRDLPP YTFAGLASLQ RLNLQGNRVS PCGGPGEPGP 651 700 ENSP00000384126/1-662 SGCVAFSGIT SLRSLSLVDN EIELLRAGAF LHTPLTELDL SSNPGLEVAT ENSBTAP00000001716/1-662 SGCVAFSGIS SLRVLNLADN EMEILQAGAF LHTPLAELDL SSNPGLDVAP ENSTTRP00000012613/1-661 VGCVAFSGVS SLRVLNLADN EMETLRAGAF LHTPLTELDL SANPGLDVAT BACU012501/1-663 AGCVAFSGVS SLRVLNLADN EMEMLRAGAF LHTPLTELDL SANPGLDVAT bmy_01302T0/1-886 AGCVAFSGVS SLRVLNLADN EMETLRAGAF LHTPLTELDL SANPGLDVAT 701 750 ENSP00000384126/1-662 GALGGLEASL EVLALQGNGL MVLQVDLPCF ICLKRLNLAE NRLSHLPAWT ENSBTAP00000001716/1-662 GALAGLEGSL EVLALQGNGL AVLQVDLPCF SCLKRLNLAE NRLSRLPAWT ENSTTRP00000012613/1-661 GALAGLEGSL EVLALQGNGL AVLQVDLPCF SCLKRLNLAE NRLSRLPTWT BACU012501/1-663 GALAGLEGSL EVLALQGNGL AILQVDLPCF SCLKRLNLAE NRLSRLPAWT bmy_01302T0/1-886 GALAGLEGSL EVLALQGNGL AILQVDLPCF SCLKRLNLAE NRLSRLPAWT 751 800 ENSP00000384126/1-662 QAVSLEVLDL RNNSFSLLPG SAMGGLETSL RRLYLQGNPL SCCGNGWLAA ENSBTAP00000001716/1-662 QAVSLEVLDL RNNSFSLLPG SAMGGLENSL RRLYLQGNPL SCCGNGWLAA ENSTTRP00000012613/1-661 QAVSLEVLDL RNNSFSLLPG SAMGGLETSL RRLYLQGNPL SCCGNGWLAA BACU012501/1-663 QAVSLEVLDL RNNSFSLLPG SAMGGLETSL RRLYLQGNPL SCCGNGWLAG bmy_01302T0/1-886 QAVSLEVLDL RNNSFSLLPG SAMGGLETSL RRLYLQGNPL SCCGNGWLAA 801 850 ENSP00000384126/1-662 QLHQGRVDVD ATQDLICRFS SQEEVSLSHV RPEDCEKGGL KNINLIIILT ENSBTAP00000001716/1-662 QLHQGRVDVD ATQDLICRFG SQEEVSLSHV RPEDCEKGGL KNINLIIILT ENSTTRP00000012613/1-661 QLHQGRVDVD ATQDLICRFG SQEEVSLSHV RPEDCEKGGL KNVNLIIILT BACU012501/1-663 QLHQGRVDVD ATQDLICRFG SQEEVSLSHV RPEDCEKGGL KNVNLIIILT bmy_01302T0/1-886 QLHQGRVDVD ATQDLICRFG SQEEVSLSHV RPEDCEKGGL KNVNLIIILT 851 900 ENSP00000384126/1-662 FILVSAILLT TLAACCCVRR QKFNQQ-YKA ------- ENSBTAP00000001716/1-662 FAVVSAILLT TLATCCCVRR QKFSQQ-YKA ------- ENSTTRP00000012613/1-661 FALVCAILLT TLAACCCVRR QKFNQQ-YKA ------- BACU012501/1-663 FALVCAVLLT TLATCCFVRR QKFNQQ-YKA ------- bmy_01302T0/1-886 FALVCAVLLT TLATCCFVRR QKFNQHDFQL LWNIKSL