KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:19 2014 Check: 00 .. Name: BACU015191/1-685 Len: 685 Check: 2173 Weight: 1.00 Name: bmy_00402T0/1-339 Len: 685 Check: 4273 Weight: 1.00 Name: ENSTTRP00000010688/1-348 Len: 685 Check: 8760 Weight: 1.00 Name: ENSP00000296271/1-348 Len: 685 Check: 7644 Weight: 1.00 Name: ENSBTAP00000001730/1-348 Len: 685 Check: 6843 Weight: 1.00 // 1 50 BACU015191/1-685 MNGTEGLNFY VPFSNKTGVV RSPFEYPQYY LAEPWQFSVL AAYMFLLIVL bmy_00402T0/1-339 MNGTEGLNFY VPFSNKTGVV RSPFEYPQYY LAEPWQFSVL AAYMFLLIVL ENSTTRP00000010688/1-348 MNGTEGLNFY VPFSNKTGVV RSPFEYPQYY LAEPWQFSVL AAYMFLLIVL ENSP00000296271/1-348 MNGTEGPNFY VPFSNATGVV RSPFEYPQYY LAEPWQFSML AAYMFLLIVL ENSBTAP00000001730/1-348 MNGTEGPNFY VPFSNKTGVV RSPFEAPQYY LAEPWQFSML AAYMFLLIML 51 100 BACU015191/1-685 GFPINFLTLY VTVQHKKLRT PLNYILLNLA VANLFMVFGG FTTTLYTSLH bmy_00402T0/1-339 GFPINFLTLY VTVQHKKLRT PLNYILLNLA VANLFMVFGG FTTTLYTSLH ENSTTRP00000010688/1-348 GFPINFLTLY VTVQHKKLRT PLNYILLNLA VANLFMVFGG FTTTLYTSLH ENSP00000296271/1-348 GFPINFLTLY VTVQHKKLRT PLNYILLNLA VADLFMVLGG FTSTLYTSLH ENSBTAP00000001730/1-348 GFPINFLTLY VTVQHKKLRT PLNYILLNLA VADLFMVFGG FTTTLYTSLH 101 150 BACU015191/1-685 AYFIFGPTGC NAEGFFATLG GEIALWSLVV LAIERYVVVC KPMSNFRFGE bmy_00402T0/1-339 AYFVLGPTGC NLEGFFATLG GEIALWSLVV LAIERYVVVC KPMSNFRFGE ENSTTRP00000010688/1-348 AYFVFGPTGC NLEGFFATLG GEIALWSLVV LAIERYVVVC KPMSNFRFGE ENSP00000296271/1-348 GYFVFGPTGC NLEGFFATLG GEIALWSLVV LAIERYVVVC KPMSNFRFGE ENSBTAP00000001730/1-348 GYFVFGPTGC NLEGFFATLG GEIALWSLVV LAIERYVVVC KPMSNFRFGE 151 200 BACU015191/1-685 NHAIMGLAVT WIMALACAAP PLVGWSRYIP EGMQCSCGID YYTLSPEVNN bmy_00402T0/1-339 NHAIMGLAVT WIMALACAAP PLVGWSRYIP EGMQCSCGID YYTLSPEVNN ENSTTRP00000010688/1-348 NHAIMGLALT WIMAMACAAP PLVGWSRYIP EGMQCSCGID YYTLSPEVNN ENSP00000296271/1-348 NHAIMGVAFT WVMALACAAP PLAGWSRYIP EGLQCSCGID YYTLKPEVNN ENSBTAP00000001730/1-348 NHAIMGVAFT WVMALACAAP PLVGWSRYIP EGMQCSCGID YYTPHEETNN 201 250 BACU015191/1-685 ESFVIYMFVV HFSIPLIIIF FCYGQLVFTV KEAAAQQQES ATTQKAEKEV bmy_00402T0/1-339 ESFVIYMFVV HFSIPLVIIF FCYGQLVFTV KEAAAQQQES ATTQKAEKEV ENSTTRP00000010688/1-348 ESFVIYMFVV HFTIPLVIIF FCYGQLVFTV KEAAAQQQES ATTQKAEKEV ENSP00000296271/1-348 ESFVIYMFVV HFTIPMIIIF FCYGQLVFTV KEAAAQQQES ATTQKAEKEV ENSBTAP00000001730/1-348 ESFVIYMFVV HFIIPLIVIF FCYGQLVFTV KEAAAQQQES ATTQKAEKEV 251 300 BACU015191/1-685 TRMVIIMVVA FLICWVPYAS VAFYIFTHQG SNFGPIFMTV PSFFAKSSSI bmy_00402T0/1-339 TRMVVIMVVA FLICWLPYAS VAFYIFIHQG SDFGPIFMTI PAFFAKSSSI ENSTTRP00000010688/1-348 TRMVIIMVVA FLICWVPYAS VAFYIFTHQG SDFGPIFMTI PSFFAKSSSI ENSP00000296271/1-348 TRMVIIMVIA FLICWVPYAS VAFYIFTHQG SNFGPIFMTI PAFFAKSAAI ENSBTAP00000001730/1-348 TRMVIIMVIA FLICWLPYAG VAFYIFTHQG SDFGPIFMTI PAFFAKTSAV 301 350 BACU015191/1-685 YNPVIYIMMN KQFRNCMLTT LCCGRSPLAD DEVSTTASKT ETSQDGLEQG bmy_00402T0/1-339 YNP------- --FRNCMLTT LCCGRSPLGD DEASTTASKT ETSQ------ ENSTTRP00000010688/1-348 YNPVIYIMMN KQFRNCMLTT LCCGRNPLGD DEASTTASKT ETSQ------ ENSP00000296271/1-348 YNPVIYIMMN KQFRNCMLTT ICCGKNPLGD DEASATVSKT ETSQ------ ENSBTAP00000001730/1-348 YNPVIYIMMN KQFRNCMVTT LCCGKNPLGD DEASTTVSKT ETSQ------ 351 400 BACU015191/1-685 SVHLILDPGL PGLGNRQSPL GVRGLSRSGV REPRRHPPVL RMVLEALQAG bmy_00402T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010688/1-348 ---------- ---------- ---------- ---------- ---------- ENSP00000296271/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001730/1-348 ---------- ---------- ---------- ---------- ---------- 401 450 BACU015191/1-685 EQRRGTSVAA IKVYILQKYP TMDVLRLKYL LKQALATGMH RGLLVRPVNS bmy_00402T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010688/1-348 ---------- ---------- ---------- ---------- ---------- ENSP00000296271/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001730/1-348 ---------- ---------- ---------- ---------- ---------- 451 500 BACU015191/1-685 KARGATGSFK LVSKDKRKIQ PRKTSTMTAP RRPGQAEGKD PKKPSESKKN bmy_00402T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010688/1-348 ---------- ---------- ---------- ---------- ---------- ENSP00000296271/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001730/1-348 ---------- ---------- ---------- ---------- ---------- 501 550 BACU015191/1-685 PPNPGEVKKG SRKPGEGRTA TPKPGAAKKA PKKGQQNKDQ EARLGEAKKS bmy_00402T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010688/1-348 ---------- ---------- ---------- ---------- ---------- ENSP00000296271/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001730/1-348 ---------- ---------- ---------- ---------- ---------- 551 600 BACU015191/1-685 SQQPDKATQA PPIASGPGGK SEVKGGRSNQ ADTKAHRKTK PGSQSSKPTV bmy_00402T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010688/1-348 ---------- ---------- ---------- ---------- ---------- ENSP00000296271/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001730/1-348 ---------- ---------- ---------- ---------- ---------- 601 650 BACU015191/1-685 TKGKNGAASP AKKKMGSKVP KKAAAQGAGE GPKAEAPVPP KGSGSKMEPV bmy_00402T0/1-339 -------VAP A--------- ---------- ---------- ---------- ENSTTRP00000010688/1-348 -------VAP A--------- ---------- ---------- ---------- ENSP00000296271/1-348 -------VAP A--------- ---------- ---------- ---------- ENSBTAP00000001730/1-348 -------VAP A--------- ---------- ---------- ---------- 651 700 BACU015191/1-685 PLARKAEAPK GPRKPGIPTK SSSSKAASKK AEAES bmy_00402T0/1-339 ---------- ---------- ---------- ----- ENSTTRP00000010688/1-348 ---------- ---------- ---------- ----- ENSP00000296271/1-348 ---------- ---------- ---------- ----- ENSBTAP00000001730/1-348 ---------- ---------- ---------- -----