KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:21 2014 Check: 00 .. Name: ENSP00000319651/1-504 Len: 506 Check: 2770 Weight: 1.00 Name: ENSBTAP00000001736/1-496 Len: 506 Check: 8549 Weight: 1.00 Name: ENSTTRP00000014416/1-498 Len: 506 Check: 3246 Weight: 1.00 Name: BACU006629/1-498 Len: 506 Check: 1723 Weight: 1.00 Name: bmy_13194T0/1-498 Len: 506 Check: 1362 Weight: 1.00 // 1 50 ENSP00000319651/1-504 MERSQCGSRD RGVSGRPHLA PGLVVAAPPP PSPALPVPSG MQVPPAFLRP ENSBTAP00000001736/1-496 MEQSQCGSRD RSRSGPLHLA PGLVVAAPPP PSPALPVPPG IPVPPTFLRP ENSTTRP00000014416/1-498 MEQSQCGSRD QSGSGPPHLA PGLVAAAPPP QSPALPVPPG IPVPPTFLRP BACU006629/1-498 MEQSQCGSRD RTGSGPPHLA PGLVAAAPPP PSPVLPVPPG IPVPPTFLRP bmy_13194T0/1-498 MEQSQCGSRD RTGSGPPHLA PGLVAAAPPP PSPALPVAPG IPVPPTFLRP 51 100 ENSP00000319651/1-504 PSLFLRAAAA AAAAAAATSG SGGCPPAPGL ESGVGAVGCG YPRTPKCARC ENSBTAP00000001736/1-496 SSLFLR---- ----AASSAG SGGCPPPAEL ERGVGAVAGG YPRTPKCARC ENSTTRP00000014416/1-498 SSLFLR---- --AAAAATAG SGGCPPPAGV ERGVGAVACG YPRTPKCARC BACU006629/1-498 SSLFLR---- --AAAAATAG SGGCPPPAGG DRGVGAVA-G YPRTPKCARC bmy_13194T0/1-498 SSLFLR---- --AAAAATAG RGGCPPPAGV ERGVGAVA-G YPRTPKCARC 101 150 ENSP00000319651/1-504 RNHGVVSALK GHKRFCRWRD CACAKCTLIA ERQRVMAAQV ALRRQQAQEE ENSBTAP00000001736/1-496 RNHGVVSALK GHKRFCRWRD CACAKCTLIA ERQRVMAAQV ALRRQQAQEE ENSTTRP00000014416/1-498 RNHGVVSALK GHKRFCRWRD CACAKCTLIA ERQRVMAAQV ALRRQQAQEE BACU006629/1-498 RNHGVVSALK GHKRFCRWRD CACAKCTLIA ERQRVMAAQV ALRRQQAQEE bmy_13194T0/1-498 RNHGVVSALK GHKRFCRWRD CACAKCTLIA ERQRVMAAQV ALRRQQAQEE 151 200 ENSP00000319651/1-504 SEARGLQRLL CSGLSWPPGG RASGGG-GRA ENPQSTG-GP AAGAALGLGA ENSBTAP00000001736/1-496 SEARGLQRLL YPGPSG-PGG RSSGGS-SRT ETSQTTSSGP ATVTALGLSA ENSTTRP00000014416/1-498 SEARALQRLL YPGPSG-PGG RSSGGS-SRT ENPQTTASGP ATVSALGLSA BACU006629/1-498 SKARALQRLL YSGPSG-PGG RSSGGGSSRT ENPQTTASGP ATVSALGLSA bmy_13194T0/1-498 SEARALQRLL YPGPSG-PGG RSSGGGSSRT ENPQTTASGP ATVSALGLSA 201 250 ENSP00000319651/1-504 LRQASGSATP AFEVFQQDYP EEKQEQKESK CESCQNGQEE LISKSHQLYL ENSBTAP00000001736/1-496 SRQASGLATP VFEIFQPDYI EEKQGQKESK CDSCQSGQEE LGSKSHQFTL ENSTTRP00000014416/1-498 SRQASGLATP AFEIFQSDYT EEKQGRKESK CDSCQSGQEE LVSKSHQFTL BACU006629/1-498 SRQASGLATP AFEIFQPDYT EEKQGQKESK CDSCQSGQEE LVSKSHQFTP bmy_13194T0/1-498 SRQASGLATP AFEIFQPDYT EEKQGQKESK CDSCQSGQEE LVSKSHQFTP 251 300 ENSP00000319651/1-504 GSSSRSNGVI GKQSIGSSIS EYSNKPDSIL SPHPGEQSGG EESPRSLSSS ENSBTAP00000001736/1-496 RSSPKSNDVT GKQNIRSSIS ENPNKDDSIQ SLHPGEQSGG EESPRSLSSS ENSTTRP00000014416/1-498 RSSPKSNDVT GKQNVRSSIS ENPNKDDSIQ SPHPGEQSGG EESPRSLSSS BACU006629/1-498 RSSPKSNDVT GKQNIRSSIS ENPNKDDGIQ SPHPGEQSGG EESPRSLSSS bmy_13194T0/1-498 RSSPKSNDVT GKQNIRSSIS ENPNKDDSIQ SPHPGEQSGG EESPRSLSSS 301 350 ENSP00000319651/1-504 DLESGNESEW VKDLTATKAS LPTVSSRPRD PLDILTKIFP NYRRSRLEGI ENSBTAP00000001736/1-496 DLESGNESEW AKDFTDSTAS HPTVSSRPRD PLDILTKIFP SYRRSRLEGI ENSTTRP00000014416/1-498 DLESGNESEW AKDFTDTTVS LPTVSSRPRD PLDILTKIFP SYRRSRLEGI BACU006629/1-498 DLESGNESEW AKDFTDNTVS LPTVSSRPRD PLDILTKIFP SYRRSRLEGI bmy_13194T0/1-498 DLESGNESEW AKDFTDTTVS LPTVSSRPRD PLDILTKIFP SYRRSRLEGI 351 400 ENSP00000319651/1-504 LRFCKGDVVQ AIEQVLNGKE HKPDNRNLAN SEELENTAFQ RASSFSLAGI ENSBTAP00000001736/1-496 LQFCKGDVVQ AIEEILNGKE HKPDTRDLAN SGALENTAFP RVSNFSLAGI ENSTTRP00000014416/1-498 LQFCKGDVVQ AIEQVLNGKE HKPDTRDLAS SGALENTAFQ RASNLSLAGI BACU006629/1-498 LQFCKGDVVQ AIEQVLNGKE HKADTRDLAS SGALENTAFQ RASNLSLAGI bmy_13194T0/1-498 LQFCKGDVVQ AIEQVLNGKE HKADTRDLAS SGALENTAFQ RASNLSLAGI 401 450 ENSP00000319651/1-504 GFGTLGNKSA FSPLQTTSAS YGGDSSLYGV NPRVGISPLR LAYSSAGRGL ENSBTAP00000001736/1-496 GFGTLGNKSA FSPLHTSSAS YGGDSSLYSL NPRLGISPFR LAYSSPGRGL ENSTTRP00000014416/1-498 GFGTLGNKSA FSPLHSTSAS YGGDSSIYSL NPRLGISPLR LAYSSPGRGL BACU006629/1-498 GFGTLGNKSA FSPLHSTSAS YGGDSSLYSL NPRLGISPLR LAYSSPGRGL bmy_13194T0/1-498 GFGTLGNKSA FSPLHSTSAS YGGDSSLYSL NPRLGISPLR LAYSSPGRGL 451 500 ENSP00000319651/1-504 SGFMSPYLTP GLVPTLPFRP ALDYAFSGMI RDSSYLSSKD SITCGRLYFR ENSBTAP00000001736/1-496 SGFMSPYLTP GLVPSLPCRP ALDYAFSGMI RDSSYLPIKD SVTGGRLYSR ENSTTRP00000014416/1-498 SGFMSPYLTP GLAPALPFRP ALDYAFSGMI RDSSYLPIKD SATGGRLYSR BACU006629/1-498 SGFMSPYLTP GLAPALPFRP ALDYAFSGMI RDSSYLPIKD SAIGGRLYSR bmy_13194T0/1-498 SGFMSPYLTP GLAPALPFRP ALDYAFSGMI RDSSYLPIKD SATGGRLYSR 501 550 ENSP00000319651/1-504 PNQDNP ENSBTAP00000001736/1-496 PNQSNL ENSTTRP00000014416/1-498 PNQNNM BACU006629/1-498 PNQNNM bmy_13194T0/1-498 PNQNNM