KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:22 2014 Check: 00 .. Name: ENSP00000311291/1-643 Len: 656 Check: 20 Weight: 1.00 Name: ENSBTAP00000001747/1-644 Len: 656 Check: 5885 Weight: 1.00 Name: BACU003184/1-570 Len: 656 Check: 2442 Weight: 1.00 Name: bmy_04731T0/1-525 Len: 656 Check: 7999 Weight: 1.00 Name: ENSTTRP00000007404/1-644 Len: 656 Check: 6723 Weight: 1.00 // 1 50 ENSP00000311291/1-643 --MGLLPKLG ASQGSDTSTS RAGRCARSVF GNI------- ---KVFVLCQ ENSBTAP00000001747/1-644 --MGLLSKPG ARQGSAASTG QAGCSPRSIF SNI------- ---KVFVLCH BACU003184/1-570 MEKVFPTNRG AGPGCWASVP QNGGPRWAVR AHRAEASPSR SPPQVFVLCH bmy_04731T0/1-525 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007404/1-644 --MGLLPEPG ARQGSGASAG RAGRCPRSIF SNV------- ---KVFVLCH 51 100 ENSP00000311291/1-643 GLLQLCQLLY SAYFKSSLTT IEKRFGLSSS SSGLISSLNE ISNAILIIFV ENSBTAP00000001747/1-644 GLLQLCQLLY SAYFRSSLTT IEKRFGLSSS SSGFISSLNE ISNAVLIIFV BACU003184/1-570 GLLQLCQLLY SAYFKSSLTT IEKRFGLSSS SSGLISSLNE ISNAILIIFV bmy_04731T0/1-525 ---------- ---------- --SRVGVTGA ---------- ---------- ENSTTRP00000007404/1-644 GLLQLCQLLY SAYFKSSLTT IEKRFGLSSS SSGLISSLNE ISNAILIIFV 101 150 ENSP00000311291/1-643 SYFGSRVHRP RLIGIGGLFL AAGAFILTLP HFLSEPYQYT LASTGNNSRL ENSBTAP00000001747/1-644 SYFGSRVHRP RLIGIGGLLL ALGAFILTLP HFLSEPYQYT KTIMGNSSHL BACU003184/1-570 SYFGSRVHRP RLIGMGGLLL ASGAFVLTLP HFLSEPYQYT VTSMGNSSRL bmy_04731T0/1-525 ---------P CLIA------ ---------- ---------- ----GNSSRL ENSTTRP00000007404/1-644 SYFGSRVHRP RLIGMGGLLL ASGAFVLTLP HFLSEPYQYT VTSMGNSSRL 151 200 ENSP00000311291/1-643 QAELCQKHWQ DLPPSKCHST TQNPQKETSS MWGLMVVAQL LAGIGTVPIQ ENSBTAP00000001747/1-644 QTELCQKSWQ GLPPSKCHSS PQDSQKETSS MWGLMVIAQL LAGIGTVPIQ BACU003184/1-570 HTELCQKHWQ GLPPSKCHSS TQDSRKETSS MWGLMVVAQL LAGIGTVPIQ bmy_04731T0/1-525 QTELCQKHWQ GLPPSKCHSS TQDSRKETSS MWGLMVVAQL LAGIGTVPIQ ENSTTRP00000007404/1-644 QTELCQKHWQ GLPPSRCHSS TQDSRKETSS MWGLMVVAQL LAGIGTVPIQ 201 250 ENSP00000311291/1-643 PFGISYVDDF SEPSNSPLYI SILFAISVFG PAFGYLLGSV MLQIFVDYGR ENSBTAP00000001747/1-644 PFGISYVDDF SEPNNSPLYI SILFAIAVFG PAFGYLLGSV MLQIFVDYGR BACU003184/1-570 PFGISYVDDF SEPNNSPLYI SILFAISVFG PAFGYLLGSV MLQIFVDYGR bmy_04731T0/1-525 PFGISYVDDF SEPNNSPLYI SILFAISVFG PAFGYLLGSV MLQIFVDYGR ENSTTRP00000007404/1-644 PFGISYVDDF SEPNNSPLYI SILFAISVFG PAFGYLLGSV MLQIFVDYGR 251 300 ENSP00000311291/1-643 VNTAAVNLVP GDPRWIGAWW LGLLISSALL VLTSFPFFFF PRAMPIGAKR ENSBTAP00000001747/1-644 VDTASVNLSP GDPRWIGAWW LGLLISSACL VVTSFPFFFF PRAIPTKMER BACU003184/1-570 VDTG------ ---------- ---------- ---------- ---------- bmy_04731T0/1-525 VDTAAVNLSP RDPRWIGAWW LGLLISSACL VVTSFPFFFF PRAMPRGMER ENSTTRP00000007404/1-644 VDTAAVNLSP GDPRWIGAWW LGLLISSACL VVTSFPFFFF PRAMPRGMER 301 350 ENSP00000311291/1-643 APATADEARK LEEAKSRGSL VDFIKRFPCI FLRLLMNSLF VLVVLAQCTF ENSBTAP00000001747/1-644 THPMVDEARN MEEVKSRRSL VDFIKRFPRI FLRLLMNPLF MLVVLAQCTF BACU003184/1-570 ---------- ---------- ------FPRI FLRLLMNPLF MLVVLAQCTF bmy_04731T0/1-525 TPTIADEARK MEEAKSRSSL VDFIKRFPRI FLRLLMNPLF MLVVLAQCTF ENSTTRP00000007404/1-644 TPTIADEARK MEEAKSRSSL VDFIKRFPRI FLSLLMSPLF MLVVLAQCTF 351 400 ENSP00000311291/1-643 SSVIAGLSTF LNKFLEKQYG TSAAYANFLI GAVNLPAAAL GMLFGGILMK ENSBTAP00000001747/1-644 SSVIAGLSTF LNKFLEKQYG ASAAYANFLI GAVNLPAAAL GMLLGGILMK BACU003184/1-570 SSVIAGLSTF LNKFLEKQYG ASAAYANFLI GAVNLPAAAL GMLFGGILMK bmy_04731T0/1-525 SSVIAGLSTF LNKFLEKQYG ASAAYANFLI GAVNLPAAAL GMLFGGILMK ENSTTRP00000007404/1-644 SSVIAGLSTF LNKFLEKQYG ASAAYANFLI GAVNLPAAAL GMLFGGILMK 401 450 ENSP00000311291/1-643 RFVFSLQAIP RIATTIITIS MILCVPLFFM GCSTPTVAEV YPPSTSSSIH ENSBTAP00000001747/1-644 RCAFSLQTIP RVAATIIIIS MILCAPLFFM GCSTPLVAEV YPPSTSSSIR BACU003184/1-570 RFVFSLQTIP RVAATIITIS MILCAPLFFM GCSTPVVAEV NP-------- bmy_04731T0/1-525 RFVFSLQTIP RVAATIITIS MILCAPLFFM GCSTPVVAEV NPRSTSSSIH ENSTTRP00000007404/1-644 RFVFSLQTIP RVAATIITIS MILCAPLFFM GCSTPVVAEV NPRSTSSSIH 451 500 ENSP00000311291/1-643 PQSPACRRDC SCPDSIFHPV CGDNGIEYLS PCHAGCSNIN MSSATSKQLI ENSBTAP00000001747/1-644 PQPLPCRQGC SCPDSVFHPV CGDDGIEYLS PCHAGCSEVN FSSIALKQPI BACU003184/1-570 ------RRDC SCPDSAFHPV CGDDGVEYLS PCHAGCSEIN VSSIVSKQPT bmy_04731T0/1-525 PQPPACRRDC SCPDSVFHPV CGDDGVEYLS PCHAGCSEIN VSSIVSKQPT ENSTTRP00000007404/1-644 PQPPACRRDC SCPDSIFHPV CGDDGVEYLS PCHAGCSEIN VSSIVSKQPT 501 550 ENSP00000311291/1-643 YLNCSCVTGG SASAKTGSCP VPCAHFLLPA IFLISFVSLI ACISHNPLYM ENSBTAP00000001747/1-644 YLNCSCVNRG SGSAKTGPCP VSCAHFLLPT IFLISFAALI ACISHNPLYM BACU003184/1-570 YLNCSCVRGG SASAKTGPCP IPCAHFLLPA IFLISFVALI ACISHNPLYM bmy_04731T0/1-525 YLNCSCVRGG SASAKTGPCP IPCAHFLLPA IFLISFVALI ACTSHNPLYM ENSTTRP00000007404/1-644 YSNCSCVRGG SASAKTGPCP IPCAHFLLPA IFLISFVALI ACISHNPLYM 551 600 ENSP00000311291/1-643 MVLRVVNQEE KSFAIGVQFL LMRLLAWLPS PALYGLTIDH SCIRWNSLCL ENSBTAP00000001747/1-644 MVLRVVNQDE KSFAIGVQFL LMRLLAWLPS PALYGLTIDY SCILWSAKCS BACU003184/1-570 MVLRVVNQEE KSFAIGVQFL LMRLLAWLPS PALYGLTIDY SCIRWGAQCS bmy_04731T0/1-525 MVLRVVNQEE KSFAIGVQFL LMRLLAWLPS PALYGLTIDY SCIRWGAQCS ENSTTRP00000007404/1-644 MVLRVVNQEE KSFAIGVQFL LMRLLAWLPS PALYGLTIDY SCIRWGAQCS 601 650 ENSP00000311291/1-643 GRRGACAYYD NDALRDRYLG LQMGYKALGM LLLCFISWRV KKNKEYNVQ- ENSBTAP00000001747/1-644 GRRGACVYYD NNALRNRYLG LQVAYKALGS VLLIFISWRV KKNKEYNVQE BACU003184/1-570 GRRGACIYYD NDAFRDRYLG LQVGYKALGM LLLLYVSWRV KKSEEYNVQE bmy_04731T0/1-525 GRRGACIYYD NDALRDRYLG LQVGYKALGT LLLLYISWRV KKNKEYNVQE ENSTTRP00000007404/1-644 GRRGACIYYD NDALRDRYLG LQVGYKALGT LLLLYISWRV KKNKEYNVQE 651 700 ENSP00000311291/1-643 KAAGLI ENSBTAP00000001747/1-644 KAASLI BACU003184/1-570 KAASLI bmy_04731T0/1-525 KAASLI ENSTTRP00000007404/1-644 KAASLI