KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:30 2014 Check: 00 .. Name: ENSP00000377545/1-330 Len: 330 Check: 4551 Weight: 1.00 Name: ENSBTAP00000001801/1-288 Len: 330 Check: 7435 Weight: 1.00 Name: ENSTTRP00000010982/1-324 Len: 330 Check: 3198 Weight: 1.00 Name: bmy_06450T0/1-285 Len: 330 Check: 7764 Weight: 1.00 Name: BACU003717/1-285 Len: 330 Check: 7314 Weight: 1.00 // 1 50 ENSP00000377545/1-330 MGKLCLGPTL CPAAAAEESR DAEPRRELLC SGRPWTWRAA ARVTTMIPWV ENSBTAP00000001801/1-288 ---------- ---------- ---------- ---------- --VATMIPWV ENSTTRP00000010982/1-324 MGKVCPGREG WAAAGRRDGP ELRGCRPV-- ----WTWPAA LRVTTMIPWV bmy_06450T0/1-285 ---------- ---------- ---------- ---------- -----MIPWV BACU003717/1-285 ---------- ---------- ---------- ---------- -----MIPWV 51 100 ENSP00000377545/1-330 LLACALPCAA DPLLGAFARR DFRKGSPQLV CSLPGPQGPP GPPGAPGPSG ENSBTAP00000001801/1-288 LLACALPCAA DPLLAAFARR DFQKGSPQLI CSMPGPQGPP GPPGAPGPSG ENSTTRP00000010982/1-324 LLACALPCAA DPLLGAFARR DFQKSSPQLI CSLPGPQGPP GPPGSPGTSG bmy_06450T0/1-285 LLACALPCAA DPLLGAFARR DFQKGSPQLI CSLPGPQGPP GPPGSPGTSG BACU003717/1-285 LLACALPCAA DPLLGAFARR DFQKGSPQLI CSLPGPQGPP GPPGSPGTSG 101 150 ENSP00000377545/1-330 MMGRMGFPGK DGQDGHDGDR GDSGEEGPPG RTGNRGKPGP KGKAGAIGRA ENSBTAP00000001801/1-288 MVGRMGFPGR DGQDGQDGDR GETGEEGSPG RTGNRGKPGP KGKAGAIGRA ENSTTRP00000010982/1-324 MVGRMGFPGK DGRDGQDGDR GDSGEEGSPG RTGNRGKPGP KGKAGAIGRA bmy_06450T0/1-285 MVGRMGFPGK DGQDGQDGDQ GDSGEEGSPG RTGNRGKPGP KGKAGAIGRA BACU003717/1-285 MVGRMGFPGK DGQDGQDGDQ GDSGEEGSPG RTGNRGKPGP KGKAGAIGRA 151 200 ENSP00000377545/1-330 GPRGPKGVNG TPGKHGTPGK KGPKGKKGEP GLPGPCSCGS GHTKSAFSVA ENSBTAP00000001801/1-288 GPRGPKGVSG APGKHGTPGK KGPKGKKGEP GLPGPCSCGS SHAKSAFSVA ENSTTRP00000010982/1-324 GPRGPKGVSG APGKHGTPGK KGPKGKKGEP GLPGPCSCGS GHAKSAFSVA bmy_06450T0/1-285 GPRGPKGVSG APGKHGTPGK KGPKGKKGEP GLPGPCSCGS GHAKSAFSVA BACU003717/1-285 GPRGPKGVSG APGKHGTPGK KGPKGKKGEP GLPGPCSCGS GHAKSAFSVA 201 250 ENSP00000377545/1-330 VTKSYPRERL PIKFDKILMN EGGHYNASSG KFVCGVPGIY YFTYDITLAN ENSBTAP00000001801/1-288 VTKSYPRERL PIKFDKILMN EGGHYNASSG KFVCGVPGIY YFTYDITLAN ENSTTRP00000010982/1-324 VTKSYPRERL PIKFDKILMN EGGHYNTSSG KFVCGVPGIY YFTYDITLAN bmy_06450T0/1-285 VTKSYPRERL PIKFDKILMN EGGHYNTSSG KFVCGVPGIY YFTYDITLAN BACU003717/1-285 VTKSYPRERL PIKFDKILMN EGGHYNTSSG KFVCGVPGIY YFTYDITLAN 251 300 ENSP00000377545/1-330 KHLAIGLVHN GQYRIRTFDA NTGNHDVASG STILALKQGD EVWLQIFYSE ENSBTAP00000001801/1-288 KHLAIGLVHN GQYRIRTFDA NTGNHDVASG STILALRQGD EVWLQIFYSE ENSTTRP00000010982/1-324 KHLAIGLVHN GQYRIRTFDA NTGNHDVASG STILALKQGD EVWLQIFYSE bmy_06450T0/1-285 KHLAIGLVHN GQYRIRTFDG NTGNHDVASG STIVALKQGD EVWLQIFYSE BACU003717/1-285 KHLAIGLVHN GQYRIRTFDA NTGNHDVASG STILALKQGD EVWLQIFYSE 301 350 ENSP00000377545/1-330 QNGLFYDPYW TDSLFTGFLI YADQDDPNEV ENSBTAP00000001801/1-288 QNGLFYDPYW TDSLFTGFLI YADQDNPSEV ENSTTRP00000010982/1-324 QNGLFYDPYW TDSLFTGFLI YADQDNPNEL bmy_06450T0/1-285 QNGLFYDPYW TDSLFTGFLI YADQDNPNEV BACU003717/1-285 QNGLFYDPYW TDSLFTGFLI YADQDNPNEV