KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:30 2014 Check: 00 .. Name: ENSP00000262776/1-585 Len: 593 Check: 2263 Weight: 1.00 Name: ENSBTAP00000001802/1-555 Len: 593 Check: 2033 Weight: 1.00 Name: ENSTTRP00000003433/1-553 Len: 593 Check: 4585 Weight: 1.00 Name: bmy_17064T0/1-530 Len: 593 Check: 8076 Weight: 1.00 Name: BACU011576/1-559 Len: 593 Check: 2901 Weight: 1.00 // 1 50 ENSP00000262776/1-585 MTPPRLFWVW LLVAGTQGVN DGDMRLADGG ATNQGRVEIF YRGQWGTVCD ENSBTAP00000001802/1-555 MAPLRLFWIW LLVVGTRGVK DGDMRLADGG SANQGRVEIY YNGQWGTVCE ENSTTRP00000003433/1-553 MAPLRLLWMW LLVAGIHGVK DGDMRLADGD TANEGRVEIY YSGRWGTVCD bmy_17064T0/1-530 ---------- ---------- ---MRLADGD TANEGRVEIY YSGQWGTVCD BACU011576/1-559 MAPLRLLWLW LLVAGTQGVK DGDMRLADGD TANEGRVEIY YSGQWGTVCD 51 100 ENSP00000262776/1-585 NLWDLTDASV VCRALGFENA TQALGRAAFG QGSGPIMLDE VQCTGTEASL ENSBTAP00000001802/1-555 NMWDLTDASV VCRALGFQNA TEALGGAAFG PGYGPIMLDE VRCTGTEPSL ENSTTRP00000003433/1-553 NLWDLTDASV VCRALGFENA TEALGGATFG PGRGPIMLDE VQCTGTEPSL bmy_17064T0/1-530 NLWDLIDASV VCRALGFKNA TEALGGATFG PGRGPIMLDE VECTGTEPSL BACU011576/1-559 NLWDLTDASV VCRALGFKNA TEALGRATFG PGRGPIMLDE VRCTGTEPSL 101 150 ENSP00000262776/1-585 ADCKSLGWLK SNCRHERDAG VVCT------ NETRSTHTLD LSRELSEALG ENSBTAP00000001802/1-555 ANCSSLGWMR SNCRHDKDAS VICT------ NETRGVYTLD LSGELPAALE ENSTTRP00000003433/1-553 ANCSSLGWMK SNCRHDEDAG VICT------ NETRGIYTFD LSSELPTALE bmy_17064T0/1-530 ANCTSLGWMK SNCRHNEDAG VICT------ NETRGIHTFD LSSELPAALE BACU011576/1-559 ANCTSLGWMK SNCRHDEDAG VICTRGGGGG GETRGIHTFD LSSELPAALE 151 200 ENSP00000262776/1-585 QIFDSQRGCD LSISVNVQGE DALGFCGHTV ILTANLEAQA LWKEPGSNVT ENSBTAP00000001802/1-555 QIFESQKGCD LFITVKVREE DEIAMCAHKL ILSTNPEAHG LWKEPGSRVT ENSTTRP00000003433/1-553 QIFESQKGCD LFIRVKTKEE GELGICAHKL ILSTNPEAHG LWKEPSSRVT bmy_17064T0/1-530 QIFESQKGCD LFIKVKTKEE DELGICAHKL ILSTNPEAHG LWKEPSSRVT BACU011576/1-559 QIFESQKGCD LFIKVKTKEE DELGICAHKL ILSTNPEAHG LWKEPSSRVT 201 250 ENSP00000262776/1-585 MSVDAECVPM VRDLLRYFYS RRIDITLSSV KCFHKLASAY GARQLQGYCA ENSBTAP00000001802/1-555 MEVDAECVPV VKDFIRYLYS RRIDVSLSSV KCLHKLASAY QAKQLQSYCG ENSTTRP00000003433/1-553 MEVDTECVPV VRDFIKYLYS RRIDVSLSSV KCLHKLASAS GAKQLQSYCG bmy_17064T0/1-530 MEVDTECVPV VRDFIKYLYS RRIDVSLSSV KCLHKLASAS GAKRLQSYCG BACU011576/1-559 MEVDTECVPV VRDFIKYLYS RRIDVSLSSV KCLHKLASAS GAKRLQSYCG 251 300 ENSP00000262776/1-585 SLFAILLPQD PSFQMPLDLY AYAVATGDAL LEKLCLQFLA WNFEALTQAE ENSBTAP00000001802/1-555 HLFAILIPQD PSFWTPLELY AYALATRDPV LEEICVQFLA WNFGALTQAE ENSTTRP00000003433/1-553 HLFAILLPQD PSFRTALDLY AYALATRDPV LEEICVQFLA WNFGALTQAE bmy_17064T0/1-530 HLFAILLPQD PSFRTPLDLY AYALATRDPV LEEICVQFLA WNFGALTQAE BACU011576/1-559 HLFAILLPQD PSFRTPLDLY AYALATRDPV LEEICVQFLA WNFGALTQAE 301 350 ENSP00000262776/1-585 AWPSVPTDLL QLLLPRSDLA VPSELALLKA VDTWSWGERA SHEEVEGLVE ENSBTAP00000001802/1-555 AWPSVPPALL QGLLSRTELV VPSELVLLLA VDKWSQERRT SHKEVEALVG ENSTTRP00000003433/1-553 AWPSVPTAVL RDLLSRNELV TPSELAVLLA LDEWSQERSI SRREVEGLVE bmy_17064T0/1-530 AWPSVPKALL RDLLSRSELV TPSELAVLLA LDEWSQERHI SHGEVEGLVE BACU011576/1-559 AWPSVPTALL RDLLSRSELV TPSELAVLLA LDEWSQERRI SHGEVEGLVE 351 400 ENSP00000262776/1-585 KIRFPMMLPE ELFELQFNLS LYWSHEALFQ KKTLQALEFH TVPFQLLARY ENSBTAP00000001802/1-555 QVRFPMMPPQ DLFSLQFNLS LYWSHEALFQ KKILQALEFH TVPFELLAQY ENSTTRP00000003433/1-553 RVRFPMIPPS DLFTLQFNLS LYWSHEALFQ KKMLQALEFH TVPFELLAQY bmy_17064T0/1-530 RVRFPMIPPR DLFTLQFNLS LYWSHKALFQ KKMLQALEFH TVPFELLAQY BACU011576/1-559 RVRFPMIPPR DLFTLQFNLS LYWSHEALFQ KKMLQALEFH TVPFELLAQY 401 450 ENSP00000262776/1-585 KGLNLTEDTY KPRIYTSPTW SAFVTDSSWS ARKSQLVYQS RRGPLVKYSS ENSBTAP00000001802/1-555 WGLNLTEGTY QPRLYTSPTW SQSVMSSS-- ---------- ---------- ENSTTRP00000003433/1-553 RGLNLTEDTY QPRLYTSPTW SASVMGSS-- ---------- ---------- bmy_17064T0/1-530 RGLNLTEDTY QPRLYTSPTW SASVMGSD-- ---------- ---------- BACU011576/1-559 RGLNLTEDTY QPRLYTSPTW SASVMGSG-- ---------- ---------- 451 500 ENSP00000262776/1-585 DYFQAPSDYR YYPYQSFQTP QHPSFLFQDK RVSWSLVYLP TIQSCWNYGF ENSBTAP00000001802/1-555 ---------- YNPSRSFQTP QHPSFLFHDS SVSWSFVYLP TLQSCWNYGF ENSTTRP00000003433/1-553 ---------- YNRYRSFKTP QHPSFLFQAS SVSWSLVYLP TVQSCWNYGF bmy_17064T0/1-530 ---------- YDRYRSFQTP QHPSFLFQAS SVSWTLVYLP TIQSCWNYGF BACU011576/1-559 ---------- YNPYRSFQTP QHPSFLFQAS SVSWTLVYLP TVRSCWNYGF 501 550 ENSP00000262776/1-585 SCSSDELPVL GLTKSGG--S DRTIAYENKA LMLCEGLFVA DVTDFEGWKA ENSBTAP00000001802/1-555 SCSSDDPPLL ALSKSSYSKS NPTIGYENRA LLHCEGSFVV DVIDFKGWKA ENSTTRP00000003433/1-553 SCSSDDPPLL ALSKSSY--S NPTIGYENKA LMLCGRNFVA DVTNFEGWKA bmy_17064T0/1-530 SCSSDDPPLL ALSKSSY--S NPTIGYENKA LMLCGGNFVA DVTNFEGWKA BACU011576/1-559 SCSSDDPPLL ALSKSSY--S NPTIGYENKA LMLCGGNFVA DVTNFEGWKA 551 600 ENSP00000262776/1-585 AIPSALDTNS SKSTSSFPCP AGHFNGFRTV IRPFYLTNSS GVD ENSBTAP00000001802/1-555 LVPSALATNS SRSTSLFPCP SGVFSRFQVV IRPFYLTNST DMD ENSTTRP00000003433/1-553 LIPSALGTNS SRSASFFPCP AGSFSSFQVV IRPFYLTNST GVD bmy_17064T0/1-530 LIPSALGTNS SRSASFFPCP AGSFSRFQVA IRPFYLTNST GVD BACU011576/1-559 LIPSALGTNS SRSASFFPCP AGSFSSFQVA IRPFYLTNST GVD