KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:15:31 2014 Check: 00 .. Name: ENSP00000386414/1-556 Len: 558 Check: 6544 Weight: 1.00 Name: ENSBTAP00000001812/1-557 Len: 558 Check: 9 Weight: 1.00 Name: BACU015615/1-330 Len: 558 Check: 7877 Weight: 1.00 Name: bmy_08909T0/1-424 Len: 558 Check: 1591 Weight: 1.00 // 1 50 ENSP00000386414/1-556 MFYTHVLMSK RGPLAKIWLA AHWEKKLTKA HVFECNLEIT IEKILSPKVK ENSBTAP00000001812/1-557 MFYTHVLMSK RGPLAKIWLA AHWEKKLTKA HVFECNLEIT IEKILSPKVK BACU015615/1-330 ---------- ---------- MCCSPDPTSG TDVQFLIPVT SDRV-AEQVK bmy_08909T0/1-424 ---------- ---------- ---------- ---------- --------VK 51 100 ENSP00000386414/1-556 IALRTSGHLL LGVVRIYNRK AKYLLADCSE AFLKMKMTFC PGLVDLPKEN ENSBTAP00000001812/1-557 IALRTSGHLL LGVVRIYNRK AKYLLADCSE ALLKMKMTFR PGLVDLPKES BACU015615/1-330 IALRTSGHLL LGVVRIYNRK AKYLLADCSE ALLKMKMTFR PGLVDLPKEN bmy_08909T0/1-424 IALRTSGHLL LGVVRIYNKK AKYLLADCSE ALLKMKMTFR PGLVDLPKEN 101 150 ENSP00000386414/1-556 FEASYNAITL PEEFHDFDTQ NMNAIDVSEH FTQNQSRPEE ITLRENFDND ENSBTAP00000001812/1-557 FEAAYSTITL PEEFHDFDTQ TMNAIDVSEC SIQNQSKPEE ITLREDYGND BACU015615/1-330 LEAAYNAITL PEEFHDFDPQ NVNAIDVSEH FTQNQSKPEE ITLREDYDND bmy_08909T0/1-424 LEAAYNAITL PEEFHDFDPQ NVNAIDVSEH FTQNQSKPEE ITLREDYDND 151 200 ENSP00000386414/1-556 LIFQAESFGE ESEILRRHSF FDDNILLNSS GPLIEHSSGS LTGERSLFYD ENSBTAP00000001812/1-557 LLFHAGSFGE EPEILRRHSL FDDSILLSSS GLLLEHSSGS PTGDKSLFCG BACU015615/1-330 LLFHAGSF-- ---------- ---------- ---------- ---------- bmy_08909T0/1-424 LLFHAGSF-- ---------- ---------- ---------- ---------- 201 250 ENSP00000386414/1-556 SGDGFGDEGA AGEMIDNLLQ DDQNILLEDM HLNREISLPS EPPNSLAVEP ENSBTAP00000001812/1-557 SGDGFGDEGA AGEMIDNLLQ DDQNILLEEM HLNTEISLLP ESPNTVVVAP BACU015615/1-330 ---------- ---------- ---------- ---------- ---------E bmy_08909T0/1-424 ---------- -----DNLLQ DDQNILLEDM HLNREISVLP EPPDTIVVEP 251 300 ENSP00000386414/1-556 DNSECICVPE NEKMNETILL STEEEGFTLD PIDIS--DIA EKRKGKKRRL ENSBTAP00000001812/1-557 DNPECVCSPE NEKMDETT-V SKEEEEFILD PIDTSDLDIA EKRKGKNRKL BACU015615/1-330 EEPEIL---- ---------- ---------- ---------- -RRHG----- bmy_08909T0/1-424 DNPECVCPPE NEKMDETT-L SNEEEGFTLD PIDTS--DIA EKRKGKKRKL 301 350 ENSP00000386414/1-556 LIDPIKELSS KVIHKQLTSF ADTLMVLELA PPTQRLMMWK KRGGVHTLLS ENSBTAP00000001812/1-557 LIDPVKEISS KIMHRQLTSF TDTLMVLELA PPTQRLMMWK QKGGADILLS BACU015615/1-330 ---------- ---------F FDDNILLNSS GP-------- -------LVE bmy_08909T0/1-424 LIDPVKEISS KIMHRQLTSF TDTLMVLELA PPTQRLMMWK QRGGADTLLS 351 400 ENSP00000386414/1-556 TAAQDLIHAE LKMLFTKCFL SSGFKLGRKM IQKESVREEV GNQNIVETSM ENSBTAP00000001812/1-557 TAAQDLTHAE LKMLFTKCFV SSGFKLGRKL IQKESVKEEM GSKNILETSM BACU015615/1-330 QSSGSLI-GE IFLFYDT--- GDGFG----- -------DEG AAGEMIETSM bmy_08909T0/1-424 TATQDLTHAE LKMLFTKCFV SSGFKLGRKL MQKESVREEM GSKNIVETSM 401 450 ENSP00000386414/1-556 MQEPNYQQEL SKPQTWKDVI GGSQHSSHED TNKNINSEQD IVEMVSLAAE ENSBTAP00000001812/1-557 MEEPNFLQEL SQPKTWKEVT DGSKCSSHEN TNKNINSDQD IVEMVSSAAE BACU015615/1-330 MEEPNSLQEL SQSKTWKEAT DGSKCSYRED TNKNINSDQD IAEMVSSAAE bmy_08909T0/1-424 MEEPNSLQEL SQSKTWKEAT DGSKCSSRED TNKNINSDQD IAEMVSSAAE 451 500 ENSP00000386414/1-556 ESSLMNDLFA QEIEYSPVEL ESLSNEENIE TERWNGRILQ MLNRLRESNK ENSBTAP00000001812/1-557 ESSLMNAILA QEIENCPMEL ESWGNEQNIE AERWNLRILQ MLHSLQESNK BACU015615/1-330 ESSLMNAILA QEIENCPIEL ---------- ---------- ------ESNK bmy_08909T0/1-424 ESSLMNAILA QEIENCPIEL ---------- ---------- ------ESNK 501 550 ENSP00000386414/1-556 MGMQSFSLMK LCRNSDRKQA AAKFYSFLVL KKQLAIELSQ SAPYADIIAT ENSBTAP00000001812/1-557 MGMQYFSLMK LCRNSDRKQT AAKFYSFLML KKHQAIELSQ SAPYADIIAT BACU015615/1-330 MGMQYFSLMK LCRNNDRKQA AAKFYSFLVL KKQRAIELSQ SAPYADIIAT bmy_08909T0/1-424 MGMQYFSLMK LCRNNDRKQA AAKFYSFLVL KKQRAIELSQ SAPYADIIAT 551 600 ENSP00000386414/1-556 MGPMFYNI ENSBTAP00000001812/1-557 VGPMFHKM BACU015615/1-330 VGPMFHKM bmy_08909T0/1-424 VGPMFHKM