KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:33 2014 Check: 00 .. Name: ENSTTRP00000006586/1-596 Len: 596 Check: 4771 Weight: 1.00 Name: ENSP00000359321/1-593 Len: 596 Check: 1303 Weight: 1.00 Name: BACU002809/1-381 Len: 596 Check: 8430 Weight: 1.00 Name: bmy_05411T0/1-392 Len: 596 Check: 3068 Weight: 1.00 Name: ENSBTAP00000001831/1-491 Len: 596 Check: 1223 Weight: 1.00 // 1 50 ENSTTRP00000006586/1-596 SDRMRDSTGA GNSLVHKRSP LRRNQKTPTS LTKLSLQDGH KVKKPACKFE ENSP00000359321/1-593 ---MRDSTGA GNSLVHKRSP LRRNQKTPTS LTKLSLQDGH KAKKPACKFE BACU002809/1-381 ---------- ---------- ---------- ---------- ---------- bmy_05411T0/1-392 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001831/1-491 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006586/1-596 EGQDVLARWS DGLFYLGTIK KINILKQSCF IIFEDSSKSW VLWKDIQTGA ENSP00000359321/1-593 EGQDVLARWS DGLFYLGTIK KINILKQSCF IIFEDSSKSW VLWKDIQTGA BACU002809/1-381 ---------- ---------- ---------- ---------- -----MYMGA bmy_05411T0/1-392 ---------- ---------- ---------- ------MEQF FMYILNISGA ENSBTAP00000001831/1-491 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006586/1-596 TGSGEMVCTI CQEEYSEAPN EMVICDKCGQ GYHQLCHTPH IDSSVIDSDE ENSP00000359321/1-593 TGSGEMVCTI CQEEYSEAPN EMVICDKCGQ GYHQLCHTPH IDCSVIDSDE BACU002809/1-381 TGSGEMVCTI CQEEYSEAPN EMVICDKCGQ GYHQLCHTPH IDSSVIDSDE bmy_05411T0/1-392 TGSGEMVCTI CQEEYSEAPN EMVICDKCGQ GYHQLCHTPH IDSSVIDSDE ENSBTAP00000001831/1-491 -----MVCTI CQEEYSEAPN EMVICDKCGQ GYHQLCHTPH IDSSVIDSDE 151 200 ENSTTRP00000006586/1-596 KWLCRQCVFA TTTKRGGALK KGPNAKALQV MKQTLPYSVA DLEWDAGHKT ENSP00000359321/1-593 KWLCRQCVFA TTTKRGGALK KGPNAKALQV MKQTLPYSVA DLEWDAGHKT BACU002809/1-381 KWLCRQCVFA TTTKRGGALK KGPNAKALQV MKQTLPYSVA DLEWDAGHKT bmy_05411T0/1-392 KWLCRQCVFA TTTKRGGALK KGPNAKALQV MKQTLPYSVA DLEWDAGHKT ENSBTAP00000001831/1-491 KWLCRQCVFA TTTKRGGALK KGPNAKALQV MKQTLPYSVA DLEWDAGHKT 201 250 ENSTTRP00000006586/1-596 NVQQCYCYCG GPGDWYLKML QCCKCKQWFH EACVQCLQKP MLFGDRXXTF ENSP00000359321/1-593 NVQQCYCYCG GPGDWYLKML QCCKCKQWFH EACVQCLQKP MLFGDRFYTF BACU002809/1-381 NVQQCYCYCG GPGE------ ---------- ---------- ------FYTF bmy_05411T0/1-392 NVQQCYCYCG GPGDWYLKML QCCKCKQWFH EACVQCLQKP MLFGDRFYTF ENSBTAP00000001831/1-491 NVQQCYCYCG GPGDWYLKML QCCKCKQWFH EACVQCLQKP MLFGDRFYTF 251 300 ENSTTRP00000006586/1-596 ICSVCSSGPE YLKRLPLQWV DIAHLCLYNL SVIHKKKYFD SELELMTYIN ENSP00000359321/1-593 ICSVCSSGPE YLKRLPLQWV DIAHLCLYNL SVIHKKKYFD SELELMTYIN BACU002809/1-381 ICSVCSSGPE YLKRLPLQWV DIAHLCLYNL SVIHKKKYFD SELELMTYIN bmy_05411T0/1-392 ICSVCSSGPE YLKRLPLQWV DIAHLCLYNL SVIHKKKYFD SELELMTYIN ENSBTAP00000001831/1-491 ICSVCSSGPE YLKRLPLQWV DIAHLCLYNL SVIHKKKYFD SELELMTYIN 301 350 ENSTTRP00000006586/1-596 ENWDRLHPGE LADTPKSERY EHVLEALNDY KTMFMSGKEI KKKKHLFGLR ENSP00000359321/1-593 ENWDRLHPGE LADTPKSERY EHVLEALNDY KTMFMSGKEI KKKKHLFGLR BACU002809/1-381 ENWDRLHPGE LADTPKSERY EHVLEALNDY KTMFMSGKEI KKKKHLFGLR bmy_05411T0/1-392 ENWDRLHPGE LADTPKSERY EHVLEALNDY KTMFMSGKEI KKKKHLFGLR ENSBTAP00000001831/1-491 ENWDRLHPGE LADTPKSERY EHVLEALNDY KTMFMSGKEI KKKKHLFGLR 351 400 ENSTTRP00000006586/1-596 IRVPPVPPNV AFKAEKEPEG TSHEFKIKGR KASKPISDSR EVSNGIEKKG ENSP00000359321/1-593 IRVPPVPPNV AFKAEKEPEG TSHEFKIKGR KASKPISDSR EVSNGIEKKG BACU002809/1-381 IRVPPVPPNV AFKAEKEPEG TSHEFKIKGR KASKPISDSR -----LSDSR bmy_05411T0/1-392 IRVPPVPPNV AFKAEKEPEG TSHEFKIKGR KASKPISDSR EVSNGIEKKG ENSBTAP00000001831/1-491 IRVPPVPPNV AFKAEKEPEG TSHEFKIKGR KASKPISESR EVSNGIEKKG 401 450 ENSTTRP00000006586/1-596 KKKSVGRPPG PYTRKMIQKT AEPPLDKESI SENPTLDLPC SIGRTEGTAH ENSP00000359321/1-593 KKKSVGRPPG PYTRKMIQKT AEPLLDKESI SENPTLDLPC SIGRTEGTAH BACU002809/1-381 KRTRTGR--- ---------- ---------- ---------- ---------- bmy_05411T0/1-392 KKKSVGRPPG PYTRKMIQKT AEPPLDKESI SENPTLDLPC SIGRTEGTAH ENSBTAP00000001831/1-491 KKKSVGRPPG PYTRKMIQKT AEPPLDKESI SENPSLDLPC SIGRTEGTAH 451 500 ENSTTRP00000006586/1-596 SSNTSDMDFT GASSAKETTS SSISRHYGLS DSRKRTRTGR SWPAAIPHLR ENSP00000359321/1-593 SSNTSDVDFT GASSAKETTS SSISRHYGLS DSRKRTRTGR SWPAAIPHLR BACU002809/1-381 ---------- ---------- ---------- ---------- SWPAAIPHLR bmy_05411T0/1-392 SSNTSDVDFT GASSAKETTS SSISRHYG-- ---------- ---------- ENSBTAP00000001831/1-491 SSNTSDVDFT GASSAKETTS SSISRHYGLS DSRKRTRTGR SWPAAIPHLR 501 550 ENSTTRP00000006586/1-596 RRRGRLPRRA LQTQNSEIVK DDEGKEDYQF DELNTEILNN LADQELQLNH ENSP00000359321/1-593 RRRGRLPRRA LQTQNSEIVK DDEGKEDYQF DELNTEILNN LADQELQLNH BACU002809/1-381 RRRGRLPRRA LQTQNSEIVK DDEGKEDYQF DELNTEILNN LADQELQLNH bmy_05411T0/1-392 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001831/1-491 RRRGRLPRRA LQTQNSEIVK DDEGKEDYQF DELNTEILNN LADQELQLNH 551 600 ENSTTRP00000006586/1-596 LKNSITSYFG AAGRIACGEK YRVLARRVTL DGKVQYLVEW EGATAS ENSP00000359321/1-593 LKNSITSYFG AAGRIACGEK YRVLARRVTL DGKVQYLVEW EGATAS BACU002809/1-381 LKNSITSYFG AAGRIACGEK YRVLARRVTL DGKVQYLVEW EGATAS bmy_05411T0/1-392 ---------- ---------- ---------- ---------- ------ ENSBTAP00000001831/1-491 LKNSITSYFG AAGRIACGEK YRVLARRVTL DGKVQYLVEW EGATAS