KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:34 2014 Check: 00 .. Name: ENSTTRP00000013924/1-1041 Len: 1042 Check: 4316 Weight: 1.00 Name: bmy_01426T0/1-846 Len: 1042 Check: 6711 Weight: 1.00 Name: ENSP00000440045/1-1042 Len: 1042 Check: 5332 Weight: 1.00 Name: BACU013618/1-836 Len: 1042 Check: 8097 Weight: 1.00 Name: ENSBTAP00000001838/1-1015 Len: 1042 Check: 7216 Weight: 1.00 // 1 50 ENSTTRP00000013924/1-1041 MENAHTKTVE EVLCHFGVNE STGLSLEQVK KLKERWGSNE LPAEEGKTLL bmy_01426T0/1-846 ---------- ---------- ---------- ---------- ---------- ENSP00000440045/1-1042 MENAHTKTVE EVLGHFGVNE STGLSLEQVK KLKERWGSNE LPAEEGKTLL BACU013618/1-836 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001838/1-1015 MENAHTKTVE EVLGHFGVNE STGLSLEQVK KLKERWGSNE LPAEEGKTLL 51 100 ENSTTRP00000013924/1-1041 ELVIEQFEDL LVRILLLAAC ISFVLAWFEE GEETITAFVE PFVILLILVA bmy_01426T0/1-846 ---------- ---------- ---------- ---------- ---------- ENSP00000440045/1-1042 ELVIEQFEDL LVRILLLAAC ISFVLAWFEE GEETITAFVE PFVILLILVA BACU013618/1-836 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001838/1-1015 ELVIEQFEDL LVRILLLAAC ISFVLAWFEE GEETITAFVE PFVILLILIA 101 150 ENSTTRP00000013924/1-1041 NAIVGVWQER NAENAIEALK EYEPEMGKVY RQDRKSVQRI KAKDIVPGDI bmy_01426T0/1-846 ---------- ---------- ---------- ---------- ---------- ENSP00000440045/1-1042 NAIVGVWQER NAENAIEALK EYEPEMGKVY RQDRKSVQRI KAKDIVPGDI BACU013618/1-836 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001838/1-1015 NAIVGVWQER NAENAIEALK EYEPEMGKVY RQDRKSVQRI KAKDIVPGDI 151 200 ENSTTRP00000013924/1-1041 VEIAVGDKVP ADIRLTSIRS TTLRVDQSIL TGESVSVIKH TDPVPDPRAV bmy_01426T0/1-846 -----GDKVP ADIRLTSIRS TTLRVDQSIL TGESVSVIKH TDPVPDPRAV ENSP00000440045/1-1042 VEIAVGDKVP ADIRLTSIKS TTLRVDQSIL TGESVSVIKH TDPVPDPRAV BACU013618/1-836 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001838/1-1015 VEIA------ ---------- ---------- -GESVSVIKH TDPVPDPRAV 201 250 ENSTTRP00000013924/1-1041 NQDKKNMLFS GTNIAAGKAM GVVVATGVNT EIGKIRDEMV ATEQERTPLQ bmy_01426T0/1-846 NQDKKNMLFS GTNIAAGKAM GVVVATGVNT EIGKIRDEMV ATEQERTPLQ ENSP00000440045/1-1042 NQDKKNMLFS GTNIAAGKAM GVVVATGVNT EIGKIRDEMV ATEQERTPLQ BACU013618/1-836 ------MLFS GTNIAAGKAM GVVVATGVNT EIGKIRDEMV ATEQERTPLQ ENSBTAP00000001838/1-1015 NQDKKNMLFS GTNIAAGKAM GVVVATGVNT EIGKIRDEMV ATEQERTPLQ 251 300 ENSTTRP00000013924/1-1041 QKLDEFGEQL SKVISLICIA VWIINIGHFN DPVHGGSWIR GAIYYFKIAV bmy_01426T0/1-846 QKLDEFGEQL SKVISLICIA VWIINIGHFN DPVHGGSWIR GAIYYFKIAV ENSP00000440045/1-1042 QKLDEFGEQL SKVISLICIA VWIINIGHFN DPVHGGSWIR GAIYYFKIAV BACU013618/1-836 QKLDEFGEQL SKVISLICIA VWIINIGHFN DPVHGGSWIR GAIYYFKIAV ENSBTAP00000001838/1-1015 QKLDEFGEQL SKVISLICIA VWIINIGHFN DPVHGGSWIR GAIYYFKIAV 301 350 ENSTTRP00000013924/1-1041 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS bmy_01426T0/1-846 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS ENSP00000440045/1-1042 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS BACU013618/1-836 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS ENSBTAP00000001838/1-1015 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS 351 400 ENSTTRP00000013924/1-1041 DKTGTLTTNQ MSVCRMFILD KVDSDTCSLN EFTITGSTYA PIGEIHKDDK bmy_01426T0/1-846 DKTGTLTTNQ MSVCRMFILD KVDSDTCSLN EFTITGSTYA PIGEIHKDDK ENSP00000440045/1-1042 DKTGTLTTNQ MSVCRMFILD RVEGDTCSLN EFTITGSTYA PIGEVHKDDK BACU013618/1-836 DKTGTLTTNQ MSVCRMFILD KVDSDTCSLN EFTITGSTYA PIGEIHKDDK ENSBTAP00000001838/1-1015 DKTGTLTTNQ MSVCRMFILD KVEGDTCSLN EFTITGSTYA PIGEIHKDDK 401 450 ENSTTRP00000013924/1-1041 PVNCHQYDGL VELATICALC NDSALDYNEA KGVYEK-GEA XXXXXXXXXX bmy_01426T0/1-846 PVKCHQYDGL VELATICALC NDSALDYNEA KGVYEKVGEA TETALTCLVE ENSP00000440045/1-1042 PVNCHQYDGL VELATICALC NDSALDYNEA KGVYEKVGEA TETALTCLVE BACU013618/1-836 PVKCHQYDGL VELATICALC NDSALDYNEA KGVYEKVGEA TETALTCLVE ENSBTAP00000001838/1-1015 PVKCHQYDGL VELATICALC NDSALDYNEA KGVYEKVGEA TETALTCLVE 451 500 ENSTTRP00000013924/1-1041 XXXXXXXXXX XXXXXXXXXX XXXVIKQLMK KEFTLEFSRD RKSMSVYCTP bmy_01426T0/1-846 KMNKIDVGL- ---------- ---------- ---------- -----LYTKQ ENSP00000440045/1-1042 KMNVFDTELK GLSKIERANA CNSVIKQLMK KEFTLEFSRD RKSMSVYCTP BACU013618/1-836 KMNVFDTELK GLSKIERANA CNSVIKQLMK KEFTLEFSRD RKSMSVYCTP ENSBTAP00000001838/1-1015 KMNVFDTELK GLSKIERANA CNSVIKQLMK KEFTLEFSRD RKSMSVYCTP 501 550 ENSTTRP00000013924/1-1041 NKPSRTSMSK MFVKGAPEGV IDRCTHIRVG STKVPMTPGV KQKIMSVIRE bmy_01426T0/1-846 TEPDIDEQN- ----GAPEGV IDRCTHIRVG STKVPMTPGV KQKIMSVIRE ENSP00000440045/1-1042 NKPSRTSMSK MFVKGAPEGV IDRCTHIRVG STKVPMTSGV KQKIMSVIRE BACU013618/1-836 NKPSRTSMSK MFVKGAPEGV IDRCTHIRVG STKVPMTPGV KQKIMSVIRE ENSBTAP00000001838/1-1015 NKPSRTSMSK MFVKGAPEGV IDRCTHIRVG STKVPMTPGV KQKIMSVIRE 551 600 ENSTTRP00000013924/1-1041 WGSGSDTLRC LALATHDNPL XXXXXXXXXX XXXXXXXTNL TFVGCVGMLD bmy_01426T0/1-846 WGSGSDTLRC LALATHDNPL RREEMNLEDS ANFIKYETNL TFVGCVGMLD ENSP00000440045/1-1042 WGSGSDTLRC LALATHDNPL RREEMHLEDS ANFIKYETNL TFVGCVGMLD BACU013618/1-836 WGSGSDTLRC LALATHDNPL RREEMNLEDS ANFIKYETNL TFVGCVGMLD ENSBTAP00000001838/1-1015 WGSGSDTLRC LALATHDNPL RREEMNLEDS ANFIKYETNL TFVGCVGMLD 601 650 ENSTTRP00000013924/1-1041 PPRIEVASSV KLCRQAGIRV IMITGDNKGT AVAICRRIGI FRQDEDVTSK bmy_01426T0/1-846 PPRTEVASSV KLCRQAGIRV IMITGDNKGT AVAICRRIGI FRQDEDVTSR ENSP00000440045/1-1042 PPRIEVASSV KLCRQAGIRV IMITGDNKGT AVAICRRIGI FGQDEDVTSK BACU013618/1-836 PPRIEVASSV KLCRQAGIRV IMITGDNKGT AVAICRRIGI FRQDEDVTSR ENSBTAP00000001838/1-1015 PPRIEVASSV KLCRQAGIRV IMITGDNKGT AVAICRRIGI FRQDEDVTAK 651 700 ENSTTRP00000013924/1-1041 AFTGREFDEL SPSAQREACL NARCFARVEP SHKSKIVEFL QSFDEITAMX bmy_01426T0/1-846 AFTGREFDEL SPSAQREACL NARCFARVEP SHKSKIVEFL QSFDEITAMT ENSP00000440045/1-1042 AFTGREFDEL NPSAQRDACL NARCFARVEP SHKSKIVEFL QSFDEITAMT BACU013618/1-836 AFTGREFDEL SPSAQREACL NARCFARVEP SHKSKIVEFL QSFDEITAMT ENSBTAP00000001838/1-1015 AFTGREFDEL SPSAQREACL NARCFARVEP SHKSKIVEFL QSFDEITAMT 701 750 ENSTTRP00000013924/1-1041 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_01426T0/1-846 GDGVNDAPAL KKSEIGIAMG SGTAVAKTAS EMVLADDNFS TIVAAVEEGR ENSP00000440045/1-1042 GDGVNDAPAL KKAEIGIAMG SGTAVAKTAS EMVLADDNFS TIVAAVEEGR BACU013618/1-836 GDGVNDAPAL KKSEIGIAMG SGTAVAKTAS EMVLADDNFS TIVAAVEEGR ENSBTAP00000001838/1-1015 GDGVNDAPAL KKSEIGIAMG SGTAVAKTAS EMVLADDNFS TIVAAVEEGR 751 800 ENSTTRP00000013924/1-1041 XXXXXXXXXX XXXXXXXXXX XXXIFLTAAL GFPEALIPVQ LLWVNLVTDG bmy_01426T0/1-846 AIYNNMKQFI RYLISSNVGE VVCIFLTAAL GFPEALIPVQ LLWVNLVTDG ENSP00000440045/1-1042 AIYNNMKQFI RYLISSNVGE VVCIFLTAAL GFPEALIPVQ LLWVNLVTDG BACU013618/1-836 AIYNNMKQFI RYLISSNVGE VVCIFLTAAL GFPEALIPVQ LLWVNLVTDG ENSBTAP00000001838/1-1015 AIYNNMKQFI RYLISSNVGE VVCIFLTAAL GFPEALIPVQ LLWVNLVTDG 801 850 ENSTTRP00000013924/1-1041 LPATALGFNP PDLDIMNRPP RNPKEPLISG WLFFRYLAIG CYVGAATVGA bmy_01426T0/1-846 LPATALGFNP PDLDIMNRPP RNPKEPLISG WLFFRYLAIG CYVGAATVGA ENSP00000440045/1-1042 LPATALGFNP PDLDIMNKPP RNPKEPLISG WLFFRYLAIG CYVGAATVGA BACU013618/1-836 LPATALGFNP PDLDIMNRPP RNPKEPLISG WLFFRYLAIG CYVGAATVGA ENSBTAP00000001838/1-1015 LPATALGFNP PDLDIMNKPP RNPKEPLISG WLFFRYLAIG CYVGAATVGA 851 900 ENSTTRP00000013924/1-1041 AAWWFIAAEG GPRVSFYQLS HFLQCKEDNP DFEGVDCTVF ESPYPMTMAL bmy_01426T0/1-846 AAWWFIAAEG GPRLSFYQLS HFLQCKEDNL DFEGVDCTVF ESPYPMTMAL ENSP00000440045/1-1042 AAWWFIAADG GPRVSFYQLS HFLQCKEDNP DFEGVDCAIF ESPYPMTMAL BACU013618/1-836 AAWWFIAAEG GPRVSFYQLS HFLQCKEDNP DFEGVDCTVF ESPYPMTMAL ENSBTAP00000001838/1-1015 AAWWFIAAEG GPRVSFYQLS HFLQCKEDNP DFEGVDCAVF ESPYPMTMAL 901 950 ENSTTRP00000013924/1-1041 SVLVTIEMCN ALNSLSENQS LLRMPPWENI WLVGSICLSM SLHFLILYVE bmy_01426T0/1-846 SVLVTIEMCN ALNSLSENQS LLRMPPWENI WLVGSICLSM SLHFLILYVE ENSP00000440045/1-1042 SVLVTIEMCN ALNSLSENQS LLRMPPWENI WLVGSICLSM SLHFLILYVE BACU013618/1-836 SVLVTIEMCN ALNSLSENQS LLRMPPWENI WLVGSICLSM SLHFLILYVE ENSBTAP00000001838/1-1015 SVLVTIEMCN ALNSLSENQS LLRMPPWENI WLVGSICLSM SLHFLILYVE 951 1000 ENSTTRP00000013924/1-1041 PLPLIFQITP LNLTQWLMVL KISLPVILMD ETLKFVARNY LEPGKECVQP bmy_01426T0/1-846 PLPIIFQITP LNLTQWLMVL KISLPVILMD ETLKFVARNY LEPGKECVQP ENSP00000440045/1-1042 PLPLIFQITP LNVTQWLMVL KISLPVILMD ETLKFVARNY LEPGKECVQP BACU013618/1-836 PLPIIFQITP LNLTQWLMVL KISLPVILMD ETLKFVARNY LEPGKECVQP ENSBTAP00000001838/1-1015 PLPLIFQITP LNVTQWLMVL KISLPVILMD ETLKFVARNY LEPGKECVQP 1001 1050 ENSTTRP00000013924/1-1041 ATKSCSFSAC TDGISWPFVL LIMPLVIWVY STDTNFSDMF WS bmy_01426T0/1-846 ATKSCSFSAC TDGISWPFVL LIMPLVIWVY STDTNFSDMF WS ENSP00000440045/1-1042 ATKSCSFSAC TDGISWPFVL LIMPLVIWVY STDTNFSDMF WS BACU013618/1-836 ATKSCSFSAC TDGISWPFVL LIMPLVIWVY STDTNFSDMF WS ENSBTAP00000001838/1-1015 ATKPCSFSAC TDGISWPFVL LIMPLVVWVY STDTNFSDMF WS