KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:35 2014 Check: 00 .. Name: ENSTTRP00000016366/1-369 Len: 645 Check: 9857 Weight: 1.00 Name: ENSP00000261858/1-617 Len: 645 Check: 622 Weight: 1.00 Name: ENSBTAP00000001844/1-617 Len: 645 Check: 9115 Weight: 1.00 Name: bmy_05032T0/1-617 Len: 645 Check: 9816 Weight: 1.00 Name: BACU017957/1-644 Len: 645 Check: 8774 Weight: 1.00 // 1 50 ENSTTRP00000016366/1-369 ---------- ---------- ------MRCL AARVNYKTLI VICALFTLVT ENSP00000261858/1-617 ---------- ---------- ------MRCL AARVNYKTLI IICALFTLVT ENSBTAP00000001844/1-617 ---------- ---------- ------MRCL AARVNYKTLI IICALFTLVT bmy_05032T0/1-617 ---------- ---------- ------MRCL AARVNYKTLI VICALFTLVT BACU017957/1-644 MQKGLKYELN ESSYGAEVNL IWYGLNMRCL AARVNYKTLI VICALFTLVT 51 100 ENSTTRP00000016366/1-369 VLLWNKCSSD KAIQFPRHSS SGFRVDALEK RAAASES-NN YVNHMAK-HS ENSP00000261858/1-617 VLLWNKCSSD KAIQFPRRSS SGFRVDGFEK RAAASES-NN YMNHVAKQQS ENSBTAP00000001844/1-617 VLLWNKCSSD KAIQVPRHLS SGFRVDALEK KAAASES-NN YVNHMAK-QS bmy_05032T0/1-617 VLLWNKCSSD KAIQFPRHSS SGFRVDALEK RAAASES-NN DVNHMAK-HS BACU017957/1-644 VLLWNKCSSD KAIQFPRHPS SGFRVDALEK RAAGSESNNN DVNHMAK-HS 101 150 ENSTTRP00000016366/1-369 EEAFPQEQQK APPVVGGFNS NGGSKVLGLK YEEIDCLIND EHTIKGRREG ENSP00000261858/1-617 EEAFPQEQQK APPVVGGFNS NVGSKVLGLK YEEIDCLIND EHTIKGRREG ENSBTAP00000001844/1-617 EEAFPQEQQK APPVVGGFNN NGGGRVLGLK YEEIDCLIND EHTIKGRREG bmy_05032T0/1-617 EEAFPQEQQK APPVVGGFNS NGGSKVLGLK YEEIDCLIND EHTIKGRREG BACU017957/1-644 EEAFPQEQQK APPVVGGFNS NGGSKVLGLK YEEIDCLIND EHTIKGRREG 151 200 ENSTTRP00000016366/1-369 NEVFLPFTWV EKYFDVYGK- VQYDGYDRFE FSHSYSKVYA QRAPYQPDGV ENSP00000261858/1-617 NEVFLPFTWV EKYFDVYGKV VQYDGYDRFE FSHSYSKVYA QRAPYHPDGV ENSBTAP00000001844/1-617 NEVFLPFTWV EKYFDVYGKV VQYDGYDRFE FSHSYSKVYA QRAPYHPDGV bmy_05032T0/1-617 NEVFLPFTWV EKYFDVYGKV VQYDGYDRFE FSHSYSKVYA QRAPYHPDGV BACU017957/1-644 NEVFLPFTWV EKYFDVYGKV VQYDGYDRFE FSHSYSKVYA QRAPYHPDGV 201 250 ENSTTRP00000016366/1-369 FMSFEGYNVE VRDRVKCISG VEGVPLSTQW GPQGYFYPIQ IAQYGLSHYS ENSP00000261858/1-617 FMSFEGYNVE VRDRVKCISG VEGVPLSTQW GPQGYFYPIQ IAQYGLSHYS ENSBTAP00000001844/1-617 FMSFEGYNVE VRDRVKCISG VEGVPLSTQW GPQGYFYPIQ IAQYGLSHYS bmy_05032T0/1-617 FMSFEGYNVE VRDRVKCISG VEGVPLSTQW GPQGYFYPIQ IAQYGLSHYS BACU017957/1-644 FMSFEGYNVE VRDRVKCISG VEGVPLSTQW GPQGYFYPIQ IAQYGLSHYS 251 300 ENSTTRP00000016366/1-369 KNLTXXXXXX XXXXXXXXXX XX-XXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000261858/1-617 KNLTEKPPHI EVYETAEDRD KN-KPNDWTV PKGCFMANVA DKSRFTNVKQ ENSBTAP00000001844/1-617 KNLTEKPPHI EVYETAEDRD KNSKPNDWTV PKGCFMASVA DKSRFTNVKQ bmy_05032T0/1-617 KNLTEKPPHI EVYETAEDRD KNSKPNDWTV PKGCFMASVA DKSRFTNVKQ BACU017957/1-644 KNLTEKPPHI EVYETAEDRD KNSKPNDWTV PKGCFMASVA DKSRFTNVKQ 301 350 ENSTTRP00000016366/1-369 XXXXXTSDGV SLQLGNTKDF IISFDLKFLT NGSVSVVLET TEKNQLFTVH ENSP00000261858/1-617 FIAPETSEGV SLQLGNTKDF IISFDLKFLT NGSVSVVLET TEKNQLFTIH ENSBTAP00000001844/1-617 FIAPETSEGV SLQLGNTKDF IISFDLKFLT NGSVSVVLET TEKNQLFTVH bmy_05032T0/1-617 FTAPETSDGV SLQLGNTKDF IISFDLKFLT NGSVSVVLET TEKNQLFTVH BACU017957/1-644 FTAPETSDGV SLQLGNTKDF IISFDLKFLT NGSVSVVLET TEKNQLFTVH 351 400 ENSTTRP00000016366/1-369 YVSNTQLIAF KERDIYYGIG PRTSWSTVTR DLVTDLRKGV GLPTTKAVK- ENSP00000261858/1-617 YVSNAQLIAF KERDIYYGIG PRTSWSTVTR DLVTDLRKGV GLSNTKAVKP ENSBTAP00000001844/1-617 YVSNTQLIAF KERDIYYGIG PRTSWSTVTR DLVTDLRKGV GLSNTKAVKP bmy_05032T0/1-617 YVSNTQLIAF KERDIYYGIG PRTSWSTVTR DLVTDLRKGV GLSNTKAVKP BACU017957/1-644 YVSNTQLIAF KERDIYYGIG PRTSWSTVTR DLVTDLRKGV GLSNTKAVKP 401 450 ENSTTRP00000016366/1-369 ---------- ---------- ---------- ---------- ---------- ENSP00000261858/1-617 TKIMPKKVVR LIAKGKGFLD NITISTTAHM AAFFAASDWL VRNQDEKGGW ENSBTAP00000001844/1-617 TRIMPKKVVR LIAKGKGFLD NITISTTAHM AAFFAASDWL VRNQDEKGGW bmy_05032T0/1-617 TKIMPKKVVR LIAKGKGFLD NITISTTAHM AAFFAASDWL VRNQDEKGGW BACU017957/1-644 TKIMPKKVVR LIAKGKGFLD NITISTTAHM AAFFAASDWL VRNQDEKGGW 451 500 ENSTTRP00000016366/1-369 ---------- ---------- ---------- ---------- ---------- ENSP00000261858/1-617 PIMVTRKLGE GFKSLEPGWY SAMAQGQAIS TLVRAYLLTK DHIFLNSALR ENSBTAP00000001844/1-617 PIMVTRKLGE GFKSLEPGWY SAMAQGQAIS TLVRAYLLTK DHIFLNSALR bmy_05032T0/1-617 PIMVTRKLGE GFKSLEPGWY SAMAQGQAIS TLVRAYLLTK DHVFLNSALR BACU017957/1-644 PIMVTRKLGE GFKSLEPGWY SAMAQGQAIS TLVRAYLLTK DHVFLNSALR 501 550 ENSTTRP00000016366/1-369 ---------- ---------- ---------- ---------- ---------- ENSP00000261858/1-617 ATAPYKFLSE QHGVKAVFMN KHDWYEEYPT TPSSFVLNGF MYSLIGLYDL ENSBTAP00000001844/1-617 ATAPYKFLSE QHGVKAVFMN KHDWYEEYPT TPSSFVLNGF MYSLIGLYDL bmy_05032T0/1-617 ATAPYKFLSE QHGVKAVFMN KHDWYEEYPT TPSSFVLNGF MYSLIGLYDL BACU017957/1-644 ATAPYKFLSE QHGVKAVFMN KHDWYEEYPT TPSSFVLNGF MYSLIGLYDL 551 600 ENSTTRP00000016366/1-369 ---------- ---------- ---------- ---------- ---------- ENSP00000261858/1-617 KETAGEKLGK EARSLYERGM ESLKAMLPLY DTGSGTIYDL RHFMLGIAPN ENSBTAP00000001844/1-617 KETAGEKLGK EARSLYERGM ESLKAMLPLY DTGSGTIYDL RHFMLGIAPN bmy_05032T0/1-617 KETAGEKLGK EARSLYERGM ESLKAMLPLY DTGSGTIYDL RHFMLGIAPN BACU017957/1-644 KETAGEKLGK EARSLYERGM ESLKAMLPLY DTGSGTIYDL RHFMLGIAPN 601 650 ENSTTRP00000016366/1-369 ---------- ---------- ---------- ---------- ----- ENSP00000261858/1-617 LARWDYHTTH INQLQLLSTI DESPVFKEFV KRWKSYLKGS RAKHN ENSBTAP00000001844/1-617 LARWDYHTTH INQLQLLSTI DESPIFKEFV KRWKSYLKGS RAKHN bmy_05032T0/1-617 LARWDYHTTH INQLQLLSTI DESPIFKEFV KRWKSYLKGS RAKHN BACU017957/1-644 LARWDYHTTH INQLQLLSTI DESPVFKEFV KRWKSYLKGS RAKHN