KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:37 2014 Check: 00 .. Name: ENSP00000253099/1-311 Len: 374 Check: 5792 Weight: 1.00 Name: bmy_13754T0/1-341 Len: 374 Check: 5671 Weight: 1.00 Name: ENSBTAP00000001861/1-294 Len: 374 Check: 2193 Weight: 1.00 Name: ENSTTRP00000009033/1-310 Len: 374 Check: 4443 Weight: 1.00 Name: BACU002506/1-294 Len: 374 Check: 1903 Weight: 1.00 // 1 50 ENSP00000253099/1-311 MLQFVRAGAR AWLRPTGSQG LSSLAEEAAR ATENPEQVAS EGLPEPVLRK bmy_13754T0/1-341 MLQLVRAGAR AWLRPKGCRG LKALAEEAVQ PAEKPEPVAS AGPRVPVLRR ENSBTAP00000001861/1-294 MQQLVRAGAR AWLRPRGCRG LSALTEEAVQ SAEKPEPLAN AGPQAPVLRR ENSTTRP00000009033/1-310 MLQLVRAGAR AWLRPKGCRG LKALAEEAVQ PAEKPEPVAS AGHRVPVLRR BACU002506/1-294 MLQLVRAGAR AWLRPKGCRG LKALAEEAVQ PAEKPEPVAS AGPRVPVLRR 51 100 ENSP00000253099/1-311 VELPVPTHRR PVQAWVESLR GFEQERVGLA DLHPDVFATA PRLDILHQVA bmy_13754T0/1-341 CELPVLGHRR PVQAWVEALR GYEQERLG-- ------WISC TRLPS----- ENSBTAP00000001861/1-294 CELPVPLHRR PVQAWVESLR GYEQERVGLT ELHPDVFSTA PRLDILHQVA ENSTTRP00000009033/1-310 CELPVLAHRR PVQAWVESLR GYEQERLGLT ELHPDVXXXX XXLDILHQVA BACU002506/1-294 CELPVLGHRR PVQAWVETLR GYEQERLGLT ELHPDVFSAT PRLDILHQVA 101 150 ENSP00000253099/1-311 MWQKNFKRIS YAKTKTRAEV RGGGRKPWPQ KGTGRARHGS IRSPLWRGGG bmy_13754T0/1-341 --GRRTSREF YAKTKTRAEV RGGGRKPWPQ KGSGRARHGS IRSPIWRGGG ENSBTAP00000001861/1-294 IWQKNFKRIS YAKTKTRAEV RGGGRKPWQQ KGSGRARHGS IRSPIWRGGG ENSTTRP00000009033/1-310 IWQKNFKRIS YAKTKTRAEV QGGGRKPWPQ KGSGRARHGS IRSPIWRGGG BACU002506/1-294 IWQKNFKRIS YAKTKTRAEV RGGGRKPWPQ KGSGRARHGS IRSPIWRGGG 151 200 ENSP00000253099/1-311 VAHGPRGPTS YYYMLPMKVR ALGLKVALTV KLAQDDLHIM ---------- bmy_13754T0/1-341 IAHGPRGPTS YYYMLPMKMR VQGLKVALTV KLAQVQQQSC REPRGSWGVG ENSBTAP00000001861/1-294 VAHGPRGPTS YYYMLPMKVR VQGLKVALTV KLAQDDLHIV ---------- ENSTTRP00000009033/1-310 VAHGPRGPTS YYYMLPMKVR VQGLKVALTV KLAQDDLHIV ---------- BACU002506/1-294 IAHGPRGPTS YYYMLPMKVR VQGLKVALTV KLAQDDLHIV ---------- 201 250 ENSP00000253099/1-311 -------DSL ELPTGDPQY- ---------- --------LT ELAHYRRW-- bmy_13754T0/1-341 CGCRVGSDCP FLPPGRPAHR GLPGAADRRP PVPDGAGPLP PLGRLRPPCG ENSBTAP00000001861/1-294 -------DSL ELPTTDPQY- ---------- --------LM ELARYRRW-- ENSTTRP00000009033/1-310 -------DSL ELPTADPQY- ---------- --------LM ELARYRRW-- BACU002506/1-294 -------DSL ELPTADPQY- ---------- --------LI ELARYRRW-- 251 300 ENSP00000253099/1-311 ---------- -------GDS VL-------L VDLTHEEMPQ SIVEATSRLK bmy_13754T0/1-341 LVRVPRRAGA AGAGGHGGRS VLSRGSPLGL CFREHEDMPQ NIVAAASGLK ENSBTAP00000001861/1-294 ---------- -------GDS VL-------F VDLEHEDMPQ NVVAATSGLK ENSTTRP00000009033/1-310 ---------- -------GDS VL-------L VDLEHEDMPQ NIVAAASGLK BACU002506/1-294 ---------- -------GDS VL-------L VDLEHEDMPQ NIVAAASGLK 301 350 ENSP00000253099/1-311 TFNLIPAVGL NVHSMLKHQT LVLTLPTVAF LEDKLLWQDS RYRPLYPFSL bmy_13754T0/1-341 TFNLVPAIGL NVHSMLKHQT LVLTLPTVAF LEEKLLWHDL RYTPLYPFRL ENSBTAP00000001861/1-294 TFNLIPAIGL NVHSMLKHQT LVLTLPTVAF LEEKLLWHDS RYTPLYPFRL ENSTTRP00000009033/1-310 TFSLVPAIGL NVHSMIKHQT LVLTLPTVAL LEEKLLWHDS RHTPLYPFRL BACU002506/1-294 TFNLVPAIGL NVHSMLKHQT LVLTLPTVAF LEEKLLWHNS RYTPLYPFRL 351 400 ENSP00000253099/1-311 PYSDFPRPLP HATQGPAATP YHC- bmy_13754T0/1-341 PYRDFP---- ---------- ---- ENSBTAP00000001861/1-294 PYRDFP---- ---------- ---- ENSTTRP00000009033/1-310 PYRDFPA--P RGTQGPSATP SRCP BACU002506/1-294 PYRDFP---- ---------- ----