KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:37 2014 Check: 00 .. Name: ENSTTRP00000001541/1-339 Len: 443 Check: 2584 Weight: 1.00 Name: bmy_13506T0/1-352 Len: 443 Check: 4926 Weight: 1.00 Name: ENSP00000365725/1-404 Len: 443 Check: 9959 Weight: 1.00 Name: BACU014819/1-339 Len: 443 Check: 1246 Weight: 1.00 Name: ENSBTAP00000001863/1-398 Len: 443 Check: 3979 Weight: 1.00 // 1 50 ENSTTRP00000001541/1-339 ---------- ---------- ---------- ---------- ---------- bmy_13506T0/1-352 MRKRTEPVAL EHECHAASGS SSAGSAAAVL DADCRLKQNL CLTGPGPAEP ENSP00000365725/1-404 MRKRTEPVAL EHERCAAAGS SSSGSAAAAL DADCRLKQNL RLTGPAAAEP BACU014819/1-339 ---------- ---MGIESG- ---------- ---------- -LAGTEGKAT ENSBTAP00000001863/1-398 MRKRTEPVAL EHERRTASGS PSAGPAAAAL DADCRLKQNL CLAGPGPAEP 51 100 ENSTTRP00000001541/1-339 ---------- ---------- ---------- ---------- ---------- bmy_13506T0/1-352 RCAADAGMKR ALGRYGNALR RFQNFLRYFF AMKIALETDS LLSLTCSLLF ENSP00000365725/1-404 RCAADAGMKR ALG------- ---------- ---------- ---------- BACU014819/1-339 KV-------- ---------- ---------- ---------- ---------- ENSBTAP00000001863/1-398 RCAADAGMKR ALG------- ---------- ---------- ---------- 101 150 ENSTTRP00000001541/1-339 ---RKGLCFR LRKILLCVVG LYVAIPFLIK LCPGIQAKLI FLNFVRVPYF bmy_13506T0/1-352 SCRRKGLCFR LRKILLCVVG LYVAIPFLIR LCPGIQAKLI FLNFVRVPYF ENSP00000365725/1-404 --RRKGVWLR LRKILFCVLG LYIAIPFLIK LCPGIQAKLI FLNFVRVPYF BACU014819/1-339 --KRKGLCFR LRKILLCVVG LYVAIPFLIK LCPGIQAKLI FLNFVRVPYF ENSBTAP00000001863/1-398 --RRKGLCFR LRKILFFVLG LYVAIPFLIK LCPGIQAKLI FLNFVRVPYF 151 200 ENSTTRP00000001541/1-339 IDLKKPQDQG LNHTCNYYLQ PEEDVTLGVW HTVPAVWWKN AQGKDQMWYE bmy_13506T0/1-352 IDLKKPQDQG LNHTCNYYLQ PEADVTLGVW HTVPAVWWKN AQGKDQMWYE ENSP00000365725/1-404 IDLKKPQDQG LNHTCNYYLQ PEEDVTIGVW HTVPAVWWKN AQGKDQMWYE BACU014819/1-339 IDLKKPQDQG LNHTCNYYLQ PEEDVTLGVW HTVPAVWWKN AQGKDQMWYE ENSBTAP00000001863/1-398 IDLKRPQDQG LNHTCNYYLQ PEEDVTIGVW HTVPTVWWKN AQGKDQMWYE 201 250 ENSTTRP00000001541/1-339 DALASSHPII LYLHGNAGTR GGDHRVELYK VLSSLGYHVV TFDYRXXXXX bmy_13506T0/1-352 DALASSHPII LYLHGNAGTR GGDHRVELYK VLSSLGYHVV TFDYRGWGDS ENSP00000365725/1-404 DALASSHPII LYLHGNAGTR GGDHRVELYK VLSSLGYHVV TFDYRGWGDS BACU014819/1-339 DALASSHPII LYLHGNAGTR GGDHRVELYK VLSSLGYHVV TFDYRGWGDS ENSBTAP00000001863/1-398 DALSSSHPII LYLHGNAGTR GGDHRVELYK VLSSLGYHVV TFDYRGWGDS 251 300 ENSTTRP00000001541/1-339 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV ATNLVRRLCE bmy_13506T0/1-352 VGMPSEQGMT YDALHVFDWI KARSGDNPVY IWGHSLGTGV ATNLVRRLCE ENSP00000365725/1-404 VGTPSERGMT YDALHVFDWI KARSGDNPVY IWGHSLGTGV ATNLVRRLCE BACU014819/1-339 VGTPSEQGMT YDALHVFDWI KARSGDNSVY IWGHSLGTGV ATNLVRRLCE ENSBTAP00000001863/1-398 VGTPSERGMT YDALHVFDWI KVRSGDNPVY IWGHSLGTGV ATNLVRRLCE 301 350 ENSTTRP00000001541/1-339 RETPPDALIL ESPFTNIREE AKSHPFSVIY RYFPGFDWFF LDPITSSGIQ bmy_13506T0/1-352 RETPPDALIL ESPFTNIREE AKSHPFSVAS ---------- -TDLIKNGLI ENSP00000365725/1-404 RETPPDALIL ESPFTNIREE AKSHPFSVIY RYFPGFDWFF LDPITSSGIK BACU014819/1-339 RETPPDALIL ESPFTNIREE AKSHPFSI-Y RYFPGFDWFF LDPITNSGIQ ENSBTAP00000001863/1-398 RETPPDALIL ESPFTNIREE AKSHPFSVIY RYFPGFDWFF LDPITSSGIQ 351 400 ENSTTRP00000001541/1-339 FANDENVKHI SCSLLILHAE DDPVVPFQLG RKXXXXXXXX XXXXXXXXXX bmy_13506T0/1-352 FI-------- ---------- ---------- ---------- -----MKIIA ENSP00000365725/1-404 FANDENVKHI SCPLLILHAE DDPVVPFQLG RKLYSIAAPA RSFRDFKVQF BACU014819/1-339 FANDENVKHI SCSLLILHAE DDPVVPFQLG RKLYNIAALS RSFRDFKVQF ENSBTAP00000001863/1-398 FANDENVKHI SCSLLILHAE DDPVVPFQLG RKLYNIAAPS RSFRDFKVQF 401 450 ENSTTRP00000001541/1-339 XXXXXDLGYR HKYIYNSPEL PRILRPQQGQ APSPGRVELD WV- bmy_13506T0/1-352 IKYKND---- ---------- ---------- ---------- --- ENSP00000365725/1-404 VPFHSDLGYR HKYIYKSPEL PRILRPQQGP GSSPDPSMWS ELV BACU014819/1-339 IPFHSDLGYR HKYIYKSPEL PRILR----- ---------- --- ENSBTAP00000001863/1-398 IPFHSDLGYR HKYIYKSPEL PRILREFLGK SEPGRQH--- ---