KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:40 2014 Check: 00 .. Name: BACU008866/1-269 Len: 290 Check: 9329 Weight: 1.00 Name: ENSBTAP00000001883/1-226 Len: 290 Check: 5421 Weight: 1.00 Name: ENSP00000315357/1-226 Len: 290 Check: 6871 Weight: 1.00 Name: bmy_10690T0/1-158 Len: 290 Check: 8646 Weight: 1.00 Name: ENSTTRP00000004118/1-191 Len: 290 Check: 2257 Weight: 1.00 // 1 50 BACU008866/1-269 MMDPCSVGVQ LRTTNECHKT YYTRHTGFKT LQELSSNDML LLQLRTGMTL ENSBTAP00000001883/1-226 ---------- ---------- -------MSF VESGRRSAPL RRRPGTPVPF ENSP00000315357/1-226 ---------- ---------- -------MSF AESGWRSALR RRGPGTPGPV bmy_10690T0/1-158 ---------- ---------- -------MSF VESGRRSALS RRRLSTAVPF ENSTTRP00000004118/1-191 ---------- ---------- ---------- ---------- ---------- 51 100 BACU008866/1-269 SGNNTICFHH AKIYIDRFED LQKSCCDPFN IHKKLAKKNL HVIDLDDATF ENSBTAP00000001883/1-226 ARPAYSVFSQ GDSWGEGEVE EEEGC----- ---DQVARDL RA-EFSAGSS ENSP00000315357/1-226 ARPSYSSFTQ GDSWGEGEVD EEEGC----- ---DQVARDL RA-EFSAGAW bmy_10690T0/1-158 AQPAFSAFTQ GDSWGEGEVD EEEGC----- ---NRVARDL RA-EFSARAS ENSTTRP00000004118/1-191 ---------- GDSWGEGEVD EEEVC----- ---NRVARDL RA-EFSAGAS 101 150 BACU008866/1-269 LSAKFGRQLV PGWKLCPKCT QIINGSVDVD SEDR--QRKK PDSDGKKIVD ENSBTAP00000001883/1-226 SKLRKDPVLQ PDGDGSPVLP DKRNGIFSAD AGGKALARRW PVQVLSILCS ENSP00000315357/1-226 SEPRKRSVLP PDGNGSPVLP DKRNGIFPAA AGSRAQPRRW PVQVLSILCS bmy_10690T0/1-158 SEPRKDSLLR PDGDGSPALP DKRNGIFSAD AGGRVQARRW PVQVLSVLCS ENSTTRP00000004118/1-191 LEPRKDSLLR PDGDRSPALP DKRNGIFSAD AGGRAQARRW PVQVLSVLCS 151 200 BACU008866/1-269 IDY--LIRFN FASCFTPSQK FGARKWTPDP TGKWSPNDKK TKEGKCDSLG ENSBTAP00000001883/1-226 LLFAILLACL LAITYLIVKE LHAENLK--- ------NEDD VNTGLLGFWS ENSP00000315357/1-226 LLFAILLAFL LAIAYLIVKE LHAENLK--- ------NEDD VDTGLLGFWT bmy_10690T0/1-158 LLFAILLAFL LAITYLIVKE LHAENLK--- ------NEDD VHTGLL---- ENSTTRP00000004118/1-191 LLFPILLAFL LAITYLIVKE LHAENLK--- ------NEDD VHTGLL-FWT 201 250 BACU008866/1-269 LGEKDSPLDC QGQSDSEPVS MHQGGMDQHM VFGFWYIT-- ---------- ENSBTAP00000001883/1-226 L--------- --LIISLTAG FSCCSFS--- ----WTVTYF DSFEPGMFPP ENSP00000315357/1-226 L--------- --LIISLTAG FSCCSFS--- ----WTVTYF DSFEPGMFPP bmy_10690T0/1-158 ---------- ---------- ----GMD--- ----FIVT-- ---------- ENSTTRP00000004118/1-191 L--------- --LIISLAAG FSCCSFS--- ----WTVTYF DSF-PGMFPP 251 300 BACU008866/1-269 -----ERPKE EHRYQIWTGV RISWLGRPPQ PLPLRREEPL ENSBTAP00000001883/1-226 TPLSPARFKK MTGHSFHMGY SMAILNGIVA ALTVAWCLM- ENSP00000315357/1-226 TPLSPARFKK LTGHSFHMGY SMAILNGIVA ALTVAWCLM- bmy_10690T0/1-158 ---------- ---------- ---------- ---------- ENSTTRP00000004118/1-191 TPLSPARFKK LTGHSFHMGY SMAILNGIVA ALTVAWCLM-