KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:43 2014 Check: 00 .. Name: ENSP00000236709/1-340 Len: 388 Check: 4834 Weight: 1.00 Name: ENSBTAP00000001899/1-341 Len: 388 Check: 459 Weight: 1.00 Name: ENSTTRP00000003762/1-341 Len: 388 Check: 9748 Weight: 1.00 Name: bmy_10305T0/1-365 Len: 388 Check: 5813 Weight: 1.00 Name: BACU003169/1-388 Len: 388 Check: 8421 Weight: 1.00 // 1 50 ENSP00000236709/1-340 MRKELQLSLS VTLLLVCGFL YQFTLKSSCL FC-LPSFKSH QGLEALLSHR ENSBTAP00000001899/1-341 MLTKLQFSLS VTLLFACGFL YQFTLKPSCL ICYLPSYKSH QGLEALLGRG ENSTTRP00000003762/1-341 MLMKLQLSLS VILLLACGFL YQFTQKSSCL FPHLPPYKSQ QGLEALLGHG bmy_10305T0/1-365 MLMKLQLSLL VILLLACGFL YQFTLKSSCL FPHLPPYKSQ QGLEALLGHG BACU003169/1-388 MLMKLQLALL VILLLACGFL YQFTLKSSCL FPHLPPYKFQ QGLEALLGHG 51 100 ENSP00000236709/1-340 RGIVFLETSE RMEPPHLVSC SVESAAKIYP EWPVVFFMKG LTDSTPMPSN ENSBTAP00000001899/1-341 HSIVFLETSE RMEPTPLVSC AVESAAKVYP EQPVLLLMKG LNNSMQLPPN ENSTTRP00000003762/1-341 RSIVFLETSE RMELSPLVSC AVESAANVYT EQPVLLLMKG LNNSMQLPPN bmy_10305T0/1-365 RSIVFLETSE RMELPPLVSC AVESAAKVYP EQPVLLLMKG LNSSMQLPPN BACU003169/1-388 RSIVFLETSE RTELSPLVSC AVESAAKVYP EQPVLLLMKG LNSSMQLPPN 101 150 ENSP00000236709/1-340 STYPAFSFLS AIDNVFLFPL DMKRLLEDTP LFSWYNQINA SAERNWLHIS ENSBTAP00000001899/1-341 STSPALSLLS AIDNVFLFPL DMKSLFEDTP LFSWYTQINS STERFWLHIS ENSTTRP00000003762/1-341 STSPALSLLS AIDNVFLLPL DMKSLFEDTP LFSWYTQINS SAQRYWLHVS bmy_10305T0/1-365 STSPALSLLS AIDN------ ---------- -------INS SAERYWLHVS BACU003169/1-388 STSPALSLLL AIDNVFLFPL DMKSLFEDTP LFSWYTQVNS SAERYWLHVS 151 200 ENSP00000236709/1-340 SDASRLAIIW KYGGIYMDTD VISIRPIPEE NFLAAQASRY SSNGIFGFLP ENSBTAP00000001899/1-341 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQKSRF SSNGVFGFLP ENSTTRP00000003762/1-341 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQTSQF SSNGVFGFLP bmy_10305T0/1-365 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQTSQF SSNGVFGFLP BACU003169/1-388 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQTSQF SSNGVFGFLP 201 250 ENSP00000236709/1-340 HHPFLWECME NFVEHYNSAI WGNQGPELMT RMLRVWCKLE DFQEVSDLRC ENSBTAP00000001899/1-341 HHPFLWQCME NFVENYNPNI WGHQGPELMT RLLRVWCKLR DFQEVSDLKC ENSTTRP00000003762/1-341 HHPFLWQCME NFVENYNSDI WGHQGPELMT RILRVWCKLR DFQEVSDLKC bmy_10305T0/1-365 HHPFLWQCME NFVENYNPDI WGHQGPELMT RILRVWCKLR DFQEVSDLKC BACU003169/1-388 HHPLLWQCME NFVENYNPDI WGHQGPQLMT RILRVWCKLR DFQEVSDLKC 251 300 ENSP00000236709/1-340 LNISFLHPQR FYPISYREWR RYYEVWDTEP SFNVSYALHL WNHMNQEGRA ENSBTAP00000001899/1-341 LNFSFLHPQR FYPISFRAWR RYYEVWDTEP SFNNSYALHL WNHMNQEGKA ENSTTRP00000003762/1-341 LNFSFLHPQR FYPISYAAWR RYYEAWDTEP SFNDSYALHL WNYMNQEGRA bmy_10305T0/1-365 LNFSFLHPQR FYPISYVAWR RYYEAWDTEP SFNDSYALHL WNYMNQEGRA BACU003169/1-388 LNFSFLHPQR FYPISFLEWR RYYEAWDTEP SFNDSYALHL WNHMNQEGRA 301 350 ENSP00000236709/1-340 VIRGSNTLVE NLYRKHCPRT YRDLIKGPEG SVTGELGPGN K--------- ENSBTAP00000001899/1-341 VVRGSNTLVE HLYRKHCPKT YRDLLQGPEG SVTREQSPGN K--------- ENSTTRP00000003762/1-341 VVRGSNTLVE NLYRKHCPKS YRDLLQGPES SVTGERGPGN K--------- bmy_10305T0/1-365 VVRGSNTLVE NLYRKHCPKT YRDLLQGPEG SVTGERGPVG PPWEGPEKTV BACU003169/1-388 VVRGSNTLVE NLYHKHCPKT YRDLLQGPEG SVTGEQGPVG PPWECPEKTV 351 400 ENSP00000236709/1-340 ---------- ---------- ---------- -------- ENSBTAP00000001899/1-341 ---------- ---------- ---------- -------- ENSTTRP00000003762/1-341 ---------- ---------- ---------- -------- bmy_10305T0/1-365 LLSAWMQPGV VLKLKPQRVL WRLSTDSNVA APVRKPKS BACU003169/1-388 LLSAWMQPGV VLKLKPQRVL RRLSTDSNVA APVRKPKS