KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:15:43 2014 Check: 00 ..
Name: ENSP00000236709/1-340 Len: 388 Check: 4834 Weight: 1.00
Name: ENSBTAP00000001899/1-341 Len: 388 Check: 459 Weight: 1.00
Name: ENSTTRP00000003762/1-341 Len: 388 Check: 9748 Weight: 1.00
Name: bmy_10305T0/1-365 Len: 388 Check: 5813 Weight: 1.00
Name: BACU003169/1-388 Len: 388 Check: 8421 Weight: 1.00
//
1 50
ENSP00000236709/1-340 MRKELQLSLS VTLLLVCGFL YQFTLKSSCL FC-LPSFKSH QGLEALLSHR
ENSBTAP00000001899/1-341 MLTKLQFSLS VTLLFACGFL YQFTLKPSCL ICYLPSYKSH QGLEALLGRG
ENSTTRP00000003762/1-341 MLMKLQLSLS VILLLACGFL YQFTQKSSCL FPHLPPYKSQ QGLEALLGHG
bmy_10305T0/1-365 MLMKLQLSLL VILLLACGFL YQFTLKSSCL FPHLPPYKSQ QGLEALLGHG
BACU003169/1-388 MLMKLQLALL VILLLACGFL YQFTLKSSCL FPHLPPYKFQ QGLEALLGHG
51 100
ENSP00000236709/1-340 RGIVFLETSE RMEPPHLVSC SVESAAKIYP EWPVVFFMKG LTDSTPMPSN
ENSBTAP00000001899/1-341 HSIVFLETSE RMEPTPLVSC AVESAAKVYP EQPVLLLMKG LNNSMQLPPN
ENSTTRP00000003762/1-341 RSIVFLETSE RMELSPLVSC AVESAANVYT EQPVLLLMKG LNNSMQLPPN
bmy_10305T0/1-365 RSIVFLETSE RMELPPLVSC AVESAAKVYP EQPVLLLMKG LNSSMQLPPN
BACU003169/1-388 RSIVFLETSE RTELSPLVSC AVESAAKVYP EQPVLLLMKG LNSSMQLPPN
101 150
ENSP00000236709/1-340 STYPAFSFLS AIDNVFLFPL DMKRLLEDTP LFSWYNQINA SAERNWLHIS
ENSBTAP00000001899/1-341 STSPALSLLS AIDNVFLFPL DMKSLFEDTP LFSWYTQINS STERFWLHIS
ENSTTRP00000003762/1-341 STSPALSLLS AIDNVFLLPL DMKSLFEDTP LFSWYTQINS SAQRYWLHVS
bmy_10305T0/1-365 STSPALSLLS AIDN------ ---------- -------INS SAERYWLHVS
BACU003169/1-388 STSPALSLLL AIDNVFLFPL DMKSLFEDTP LFSWYTQVNS SAERYWLHVS
151 200
ENSP00000236709/1-340 SDASRLAIIW KYGGIYMDTD VISIRPIPEE NFLAAQASRY SSNGIFGFLP
ENSBTAP00000001899/1-341 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQKSRF SSNGVFGFLP
ENSTTRP00000003762/1-341 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQTSQF SSNGVFGFLP
bmy_10305T0/1-365 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQTSQF SSNGVFGFLP
BACU003169/1-388 SDASRLAFIW KYGGVYMDTD VISIRPIPED NFLAAQTSQF SSNGVFGFLP
201 250
ENSP00000236709/1-340 HHPFLWECME NFVEHYNSAI WGNQGPELMT RMLRVWCKLE DFQEVSDLRC
ENSBTAP00000001899/1-341 HHPFLWQCME NFVENYNPNI WGHQGPELMT RLLRVWCKLR DFQEVSDLKC
ENSTTRP00000003762/1-341 HHPFLWQCME NFVENYNSDI WGHQGPELMT RILRVWCKLR DFQEVSDLKC
bmy_10305T0/1-365 HHPFLWQCME NFVENYNPDI WGHQGPELMT RILRVWCKLR DFQEVSDLKC
BACU003169/1-388 HHPLLWQCME NFVENYNPDI WGHQGPQLMT RILRVWCKLR DFQEVSDLKC
251 300
ENSP00000236709/1-340 LNISFLHPQR FYPISYREWR RYYEVWDTEP SFNVSYALHL WNHMNQEGRA
ENSBTAP00000001899/1-341 LNFSFLHPQR FYPISFRAWR RYYEVWDTEP SFNNSYALHL WNHMNQEGKA
ENSTTRP00000003762/1-341 LNFSFLHPQR FYPISYAAWR RYYEAWDTEP SFNDSYALHL WNYMNQEGRA
bmy_10305T0/1-365 LNFSFLHPQR FYPISYVAWR RYYEAWDTEP SFNDSYALHL WNYMNQEGRA
BACU003169/1-388 LNFSFLHPQR FYPISFLEWR RYYEAWDTEP SFNDSYALHL WNHMNQEGRA
301 350
ENSP00000236709/1-340 VIRGSNTLVE NLYRKHCPRT YRDLIKGPEG SVTGELGPGN K---------
ENSBTAP00000001899/1-341 VVRGSNTLVE HLYRKHCPKT YRDLLQGPEG SVTREQSPGN K---------
ENSTTRP00000003762/1-341 VVRGSNTLVE NLYRKHCPKS YRDLLQGPES SVTGERGPGN K---------
bmy_10305T0/1-365 VVRGSNTLVE NLYRKHCPKT YRDLLQGPEG SVTGERGPVG PPWEGPEKTV
BACU003169/1-388 VVRGSNTLVE NLYHKHCPKT YRDLLQGPEG SVTGEQGPVG PPWECPEKTV
351 400
ENSP00000236709/1-340 ---------- ---------- ---------- --------
ENSBTAP00000001899/1-341 ---------- ---------- ---------- --------
ENSTTRP00000003762/1-341 ---------- ---------- ---------- --------
bmy_10305T0/1-365 LLSAWMQPGV VLKLKPQRVL WRLSTDSNVA APVRKPKS
BACU003169/1-388 LLSAWMQPGV VLKLKPQRVL RRLSTDSNVA APVRKPKS