KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:47 2014 Check: 00 .. Name: bmy_11703T0/1-699 Len: 925 Check: 6972 Weight: 1.00 Name: BACU015356/1-812 Len: 925 Check: 5701 Weight: 1.00 Name: ENSP00000375919/1-718 Len: 925 Check: 1084 Weight: 1.00 Name: ENSTTRP00000007841/1-717 Len: 925 Check: 3041 Weight: 1.00 Name: ENSBTAP00000001925/1-654 Len: 925 Check: 1291 Weight: 1.00 // 1 50 bmy_11703T0/1-699 ---------- -----MWN-- ---------- ---------- ---------- BACU015356/1-812 ---------- ---------- ---------- ---------- ---------- ENSP00000375919/1-718 MMFRDQVGVL AGWFKGWNEC EQTVALLSLL KRVSQTQARF LQLCLEHSLA ENSTTRP00000007841/1-717 -MFRDQVGVL AGWFKGWNEC EQTVALLSLL KRVSQTQARF LQLCLEHSLA ENSBTAP00000001925/1-654 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_11703T0/1-699 ---------- ----PAAVDA KQAKSRTPLT G-------VI ADGNCE---- BACU015356/1-812 ---------- ----SGIINQ WQQESKDKVI SLLLTHLPLL KPGNLDAKVE ENSP00000375919/1-718 DCAELHVLER EANSPGIINQ WQQESKDKVI SLLLTHLPLL KPGNLDAKVE ENSTTRP00000007841/1-717 DCTELHVLEG EANSPGIINQ WQQESKDKVI SLLLTHLPLL KPGNLDAKVE ENSBTAP00000001925/1-654 ---------- ----SGIINQ WQQESKDKVI SLLLTHLPLL KPGNLDAKVE 101 150 bmy_11703T0/1-699 --KFSPSVCI KPFKEG---- ---------- ILPKL----- ---------- BACU015356/1-812 YMKLLPKILA HSIEHNQHIE ESRQLLSYAL IHPATSLEDR SALAMWLNHL ENSP00000375919/1-718 YMKLLPKILA HSIEHNQHIE ESRQLLSYAL IHPATSLEDR SALAMWLNHL ENSTTRP00000007841/1-717 YMKLLPQILA HSIEHNQHIE ESRQLLSYAL IHPATSLEDR SALAMWLNHL ENSBTAP00000001925/1-654 YMKLLPKILA HSIEHNQHIE ESRQLLSYAL IHPATSLEDR SALAMWLNHL 151 200 bmy_11703T0/1-699 ---------- ---------- ---------- ----DHLCAF QDLHMLPTSV BACU015356/1-812 EDRTSTSFGG QNRGRSDSVD YGQTHYYHQR QNSDDKLNGW QNSRDSGICI ENSP00000375919/1-718 EDRTSTSFGG QNRGRSDSVD YGQTHYYHQR QNSDDKLNGW QNSRDSGICI ENSTTRP00000007841/1-717 EDRTSTSFGG QNRGRSDSVD YGQTHYYHQR QNSDDKLNGW QNSRDSGICI ENSBTAP00000001925/1-654 EDRTSTSFGG QNRGRSDSVD YGQTHYYHQR QNSDDKLNGW QNSRDSGICI 201 250 bmy_11703T0/1-699 EA-------- GGHHGHVPGW RSPL------ ---------- --QLHRDPRP BACU015356/1-812 NASNWQDKSL GCENGHVPLY SSSSVPTTIN TIGTSTSTIL SGQAHHSPLK ENSP00000375919/1-718 NASNWQDKSM GCENGHVPLY SSSSVPTTIN TIGTSTSTIL SGQAHHSPLK ENSTTRP00000007841/1-717 NTSNWQDKSL GCENGHVPLY SSSSVPTTIN TIGTSTSTIL SGQAHHSPLK ENSBTAP00000001925/1-654 NASNWQDKSL GCENGHVPLY SSSSVPTTIN TIGTSTSTIL SGQAHHSPLK 251 300 bmy_11703T0/1-699 RHL-----LS FAQRLVQNGA VHSTLAKNRQ ASVIL----- ---------- BACU015356/1-812 RSVSLTPPMN VPNQPLGHGW MSHEDLRARG PQCLPSDHAP LSPQSSVASS ENSP00000375919/1-718 RSVSLTPPMN VPNQPLGHGW MSHEDLRARG PQCLPSDHAP LSPQSSVASS ENSTTRP00000007841/1-717 RSVSLTPPMN VPNQPLGHGW MSHEDLRARG PQCLPSDHAP LSPQSSVASS ENSBTAP00000001925/1-654 RSVSLTPPMN VPNQPLGHGW MSHEDLRARG PQCLPSDHAP LSPQSSVASS 301 350 bmy_11703T0/1-699 ----MVLLDF FIFERHVFL- LASTLKNVPA WLKSLRLHKY AALFSQMTYE BACU015356/1-812 GSGGSEHLED QTTARNTFQE EGSGMKDVPA WLKSLRLHKY AALFSQMTYE ENSP00000375919/1-718 GSGGSEHLED QTTARNTFQE EGSGMKDVPA WLKSLRLHKY AALFSQMTYE ENSTTRP00000007841/1-717 GSGGSEHLED QTTARNTFQE EGSGMKDVPA WLKSLRLHKY AALFSQMTYE ENSBTAP00000001925/1-654 GSGGSEHLED QTTARNTFQE EGSGMKDVPA WLKSLRLHKY AALFSQMTYE 351 400 bmy_11703T0/1-699 EMMALTECQL EAQNVTKGAR HKIVISIQKL KERQNLLKSL ERDIIEGGNL BACU015356/1-812 EMMALTECQL EAQNVTKGAR HKIVISIQKL KERQNLLKSL ERDIIEGGNL ENSP00000375919/1-718 EMMALTECQL EAQNVTKGAR HKIVISIQKL KERQNLLKSL ERDIIEGGSL ENSTTRP00000007841/1-717 EMMALTECQL EAQNVTKGAR HKIVISIQKL KERQNLLKSL ERDIIEGGNL ENSBTAP00000001925/1-654 EMMALTECQL EAQNVTKGAR HKIVISIQKL KERQNLLKSL ERDIIEGGNL 401 450 bmy_11703T0/1-699 RIPLQELHQM ILTPIKAYSS PSATPEARRR ESQASHPPSL MGPESQSPDC BACU015356/1-812 RIPLQELHQM ILTPIKAYSS PSTTPEARRR ESQASHPPSL MGPESQSPVC ENSP00000375919/1-718 RIPLQELHQM ILTPIKAYSS PSTTPEARRR EPQAPRQPSL MGPESQSPDC ENSTTRP00000007841/1-717 RIPLQELHQM ILTPIKAYSS PGATPEARRR ESQASHPPSL MGPESQSPDC ENSBTAP00000001925/1-654 RLPLQELHQM ILTPIKAYSS PSTTPEARRR EPQAPHPPSL MGPESQSPDC 451 500 bmy_11703T0/1-699 KDSAAAAGAT ATASAGASGG LQPHQLSSCD GELAVTPLPE GDLPGQFTRV BACU015356/1-812 KDSTAAAGAT ATASAGASGG LQPHQLSSCD GELAVTPLPE GDLPGQFTRV ENSP00000375919/1-718 KDGAAATGAT ATPSAGASGG LQPHQLSSCD GELAVAPLPE GDLPGQFTRV ENSTTRP00000007841/1-717 KESAAAAGAT ATASAGASGG LQPHQLSSCD GELAVTPLPE GDLPGQFTRV ENSBTAP00000001925/1-654 KDSATAAGAT ATTSAGASGG LQPHQLSSCD GELAVTPLPE GDLPGQFTRV 501 550 bmy_11703T0/1-699 MGKVCTQL-- ----LV---- ---------- -SRPDEENIS SYLQLIDKCL BACU015356/1-812 MGKDQGLLGP AGGALIGPLD PQAEGSLPTG HGRPDEENIS SYLQLIDKCL ENSP00000375919/1-718 MGKVCTQL-- ----LV---- ---------- -SRPDEENIS SYLQLIDKCL ENSTTRP00000007841/1-717 MGKVCTQL-- ----LV---- ---------- -SRPDEENIS SYLQLIDKCL ENSBTAP00000001925/1-654 MGKVCTQL-- ----LV---- ---------- -SRPDEENIS SYLQLIDKCL 551 600 bmy_11703T0/1-699 IHEAFTETQK KRLLSWKQQV QKLFRSFPRK TLLDISGYRQ QRNRGFGQSN BACU015356/1-812 IHEAFTETQK KRLLSWKQQV QKLFRSFPRK TLLDISGYRQ QRNRGFGQSN ENSP00000375919/1-718 IHEAFTETQK KRLLSWKQQV QKLFRSFPRK TLLDISGYRQ QRNRGFGQSN ENSTTRP00000007841/1-717 IHEAFTETQK KRLLSWKQQV QKLFRSFPRK TLLDISGYRQ QRNRGFGQSN ENSBTAP00000001925/1-654 IHEAFTETQK KRLLSWKQQV QKLFRSFPRK TLLDISGYRQ QRNRGFGQSN 601 650 bmy_11703T0/1-699 SLPTAGSVGG GMGRRNPRQY QIPSRNVPSA RLGLLGTSGF VSSTQRNTAA BACU015356/1-812 SLPTAGSVGG GMGRRNPRQY QIPSRNVPSA RLGLLGTSGF VSSTQRNTAA ENSP00000375919/1-718 SLPTAGSVGG GMGRRNPRQY QIPSRNVPSA RLGLLGTSGF VSSNQRNTTA ENSTTRP00000007841/1-717 SLPTAGSVGG GMGRRNPRQY QIPSRNVPSA RLGLLGTSGF VSSTQRNTAA ENSBTAP00000001925/1-654 SLPTTSSVGG GMGRRNPRQY QIPSRNVPSA RLGLLGTSGF VSSTQRNTAA 651 700 bmy_11703T0/1-699 NPTIMKQGRQ NLWFANPGGS NSMPSRTHSS VQRTRSLPVH TSPQNMLMFQ BACU015356/1-812 NPTIMKQGRQ NLWFANPGGS NSMPSRTHSS VQRTRSLPVH TSPQNMLMFQ ENSP00000375919/1-718 TPTIMKQGRQ NLWFANPGGS NSMPSRTHSS VQRTRSLPVH TSPQNMLMFQ ENSTTRP00000007841/1-717 NPTIMKQGRQ NLWFANPGGS NSMPSRTHSS VQRTRSLPVH TSPQNMLMFQ ENSBTAP00000001925/1-654 NPTIMKQGRQ NLWFANPGGS NSMPSRTHSS VQRTRSLPVH TSPQNMLMFQ 701 750 bmy_11703T0/1-699 QPEFQLPVTE PDINNRLESL CLSMTEHALG GECILPAWHC TPGRTPSHTG BACU015356/1-812 QPEFQLPVTE PDINNRLESL CLSMTEHALG VQILEASQHH WFTPGTSACG ENSP00000375919/1-718 QPEFQLPVTE PDINNRLESL CLSMTEHALG ---------- ---------- ENSTTRP00000007841/1-717 QPEFQLPVTE PDINNRLESL CLSMTEHALG ---------- ---------- ENSBTAP00000001925/1-654 QPEFQLPVTE PDINNRLESL CLSMTEHALG ---------- ---------- 751 800 bmy_11703T0/1-699 LTGPPQSRAE DESDRAGREI DCCGSSSVGR PCKHISRPGI GYFVICFCRG BACU015356/1-812 ATSASSPGPS DRTGTPAWGL QPLGSLTAEE EEKSKVRQQC ---------- ENSP00000375919/1-718 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007841/1-717 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001925/1-654 ---------- ---------- ---------- ---------- ---------- 801 850 bmy_11703T0/1-699 MAWCGAWGGI SKGNIGLGAG GGNASGFLDG NEGEKKEDTA WKEMRDLGGR BACU015356/1-812 ---------- ---------- -------ING QSASGRESCG --ETSQVGSG ENSP00000375919/1-718 ---------- ---------- ---------- -DGVDRTSTI ---------- ENSTTRP00000007841/1-717 ---------- ---------- ---------- -DGVDRTSTI ---------- ENSBTAP00000001925/1-654 ---------- ---------- ---------- -DGVDRTSTI ---------- 851 900 bmy_11703T0/1-699 QKPQPLGAFS EACLQSQAPG GRHGCLRPKH NGGSLFYQQG RLFKWLPSSA BACU015356/1-812 RR-------- --CEKGRLHD GNDDSITPHQ DWGSMPDSSN MHCRGLENTR ENSP00000375919/1-718 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007841/1-717 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001925/1-654 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_11703T0/1-699 SLEDGAVT-- ---------- ----- BACU015356/1-812 SFLNTPVIKL PIHEAEQLVK YRLKN ENSP00000375919/1-718 ---------- ---------- ----- ENSTTRP00000007841/1-717 ---------- ---------- ----- ENSBTAP00000001925/1-654 ---------- ---------- -----