KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:47 2014 Check: 00 .. Name: bmy_11552T0/1-303 Len: 482 Check: 6234 Weight: 1.00 Name: ENSP00000296484/1-407 Len: 482 Check: 6648 Weight: 1.00 Name: ENSTTRP00000015926/1-403 Len: 482 Check: 1657 Weight: 1.00 Name: BACU005552/1-432 Len: 482 Check: 7643 Weight: 1.00 Name: ENSBTAP00000001927/1-407 Len: 482 Check: 9225 Weight: 1.00 // 1 50 bmy_11552T0/1-303 ---------- ---------- -FTYLTLALP QEDPSLERHF KGHRDAVTCV ENSP00000296484/1-407 ---------- ---------- -----MAAPC AEDPSLERHF KGHRDAVTCV ENSTTRP00000015926/1-403 ---------- ---------- -----MAAPC LEDPSLERHF KGHRDAVTCV BACU005552/1-432 MLGGVEVVVK PLGAYSGLTF VFTGRSAVGL KEDPSLERHF KGHRDAVTCV ENSBTAP00000001927/1-407 ---------- ---------- -----MTAHC PEDPSLERHF KGHRDAVTSV 51 100 bmy_11552T0/1-303 DFSLNTKQLA VTGGVACPHG EGRAGLSLLP APHAPPISSI LVEAPGPLEP ENSP00000296484/1-407 DFSINTKQL- ---------- ---------- ---------- ---------- ENSTTRP00000015926/1-403 DFSLNTKQL- ---------- ---------- ---------- ---------- BACU005552/1-432 DFSLNTKQL- ---------- ---------- ---------- ---------- ENSBTAP00000001927/1-407 DFSLNTKQL- ---------- ---------- ---------- ---------- 101 150 bmy_11552T0/1-303 SVMASALSSA SGSMDSCLMV WHMKPQSRAY RFAGHKDTVT CVNFSPSGHL ENSP00000296484/1-407 ---------A SGSMDSCLMV WHMKPQSRAY RFTGHKDAVT CVNFSPSGHL ENSTTRP00000015926/1-403 ---------A SGSMDSCLMV WHMKPQSRAY RFAGHKDTVT CVNFSPSGHL BACU005552/1-432 ---------A SSSMDSCLMV WHMKPQSRAY RFAGHKDTVT CVNFSPSGHL ENSBTAP00000001927/1-407 ---------A SGSMDSCLMV WHMKPQTRAY RFAGHKDAVT CVNFSPSGHL 151 200 bmy_11552T0/1-303 LASGSRDKTV RIWVPNVKGE STMFRAHTAT VRSVHFCSDG QSFVTASDDK ENSP00000296484/1-407 LASGSRDKTV RIWVPNVKGE STVFRAHTAT VRSVHFCSDG QSFVTASDDK ENSTTRP00000015926/1-403 LASGSRDKTV RIWVPNVKGE STMFRAHTAT VRSIHFCSDG QSFVTASDDK BACU005552/1-432 LASGSRDKTV RIWVPNVKGE STMFRAHTAT VRSVHFCSDG QSFVTASDDK ENSBTAP00000001927/1-407 LASGSRDKTV RIWVPNVKGE STVFRAHTAT VRSVHFCSDG QSFVTASDDK 201 250 bmy_11552T0/1-303 TVKVWSTHRQ KFLFSLSQHI NWVRCAKFSP DGRLIVSASD DKTVKLWDKT ENSP00000296484/1-407 TVKVWATHRQ KFLFSLSQHI NWVRCAKFSP DGRLIVSASD DKTVKLWDKS ENSTTRP00000015926/1-403 TVKVWSTHRQ KFLFSLSQHI NWVRCAKFSP DGRLIVSASD DKTVKVWDKT BACU005552/1-432 TVKVWSTHRQ KFLFSLSQHI NWVRCAKFSP DGRLIVSASD DKTVKLWDKT ENSBTAP00000001927/1-407 TVKVWSTHRQ KFLFSLSQHI NWVRCAKFSP DGRLIVSASD DKTVKLWDKT 251 300 bmy_11552T0/1-303 SRECVHSYCE HGGFVTYVDF HPSGTCIAAA GMDNTVKVWD VRTHRLLQHY ENSP00000296484/1-407 SRECVHSYCE HGGFVTYVDF HPSGTCIAAA GMDNTVKVWD VRTHRLLQHY ENSTTRP00000015926/1-403 SRECVHSYCE HGSFVTYVDF HPSGTCIAAA GMDNTVKVWD VRTHRLLQHY BACU005552/1-432 SRECVHSYCE HGGFVTYVDF HPSGTCIAAA GMDNTVKVWD VRTHRLLQHY ENSBTAP00000001927/1-407 SRECVHSYCE HGGFVTYVDF HPSGTCIAAA GMDNTVKVWD VRTHRLLQHY 301 350 bmy_11552T0/1-303 QRECPRVAAV GLCHAG---- ---------- ---------- ---------- ENSP00000296484/1-407 QLHSAAVNGL SFHPSGNYLI TASSDSTLKI LDLMEGRLLY TLHGHQGPAT ENSTTRP00000015926/1-403 QLHSAAVNAL SFHPSGNYLV TASSDSTLKI LDLMEGRLLY TLHGHQGPAT BACU005552/1-432 QLHSAAVNAL SFHPSGNYLV TASSDSTLKI LDLMEGRLLY TLHGHQGPAT ENSBTAP00000001927/1-407 QLHSAAVNAL SFHPSGNYLV TASSDSTLKI LDLMEGRLLY TLHGHQGPAT 351 400 bmy_11552T0/1-303 ---------- ---------- ---------- ---------- ---------- ENSP00000296484/1-407 TVAFSRTGEY FASGGSDEQV MVWKSNFDIV DHGEVTKVPR PPATLASSMG ENSTTRP00000015926/1-403 TVAFSRTGEY FASGGSDEQV MVWKSNFDVV NYGEVPRVQR PPATLASSSR BACU005552/1-432 TVAFSRTGEY FASGGSDEQV MVWKSNFDVV NYGEVLRVQR PAASLASSSR ENSBTAP00000001927/1-407 TVAFSRTGEY FASGGSDEQV MVWKSNFDIV DYGEVLRVQR PPATRASSSG 401 450 bmy_11552T0/1-303 -------CLA LGCGA----- ---------- ---------- ---------- ENSP00000296484/1-407 NLPEVDFPVP PGRGRSVESV QSQPQEPVSV PQTLTSTLEH IVGQLDVLTQ ENSTTRP00000015926/1-403 TLXXXXXXXX XXXGRS-ESM QSQPQ-PVS- PQTLTSTLEH -VGQLDVLTQ BACU005552/1-432 TLPEVDSPVP PGRGRSQESM QSQPQESVSM PQTLTSTLEH IVGQLDVLTQ ENSBTAP00000001927/1-407 TLPEVDPLVP PGRGRSQESM QSHSQEPVSV PQSLTSTLEH IVGQLDVLTQ 451 500 bmy_11552T0/1-303 ---------- ---------- ---------- -- ENSP00000296484/1-407 TVSILEQRLT LTEDKLKQCL ENQQLIMQRA TP ENSTTRP00000015926/1-403 TVSILEQRLT LTEDKLKQCL ENQQLIMQRT PP BACU005552/1-432 TVSILEQRLT LTEDKLKQCL ENQQLIMQRT AP ENSBTAP00000001927/1-407 TVSILEQRLT LTEDKLKQCL ENQQLIMQRT TP