KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:50 2014 Check: 00 .. Name: ENSTTRP00000004664/1-350 Len: 370 Check: 66 Weight: 1.00 Name: ENSP00000039007/1-354 Len: 370 Check: 1133 Weight: 1.00 Name: ENSBTAP00000001947/1-354 Len: 370 Check: 2689 Weight: 1.00 Name: bmy_14581T0/1-211 Len: 370 Check: 2823 Weight: 1.00 Name: BACU003825/1-305 Len: 370 Check: 5008 Weight: 1.00 // 1 50 ENSTTRP00000004664/1-350 MLFNLRILLN KAALRNGHSF AVRNYRCGQP LQNKVQLKGR DLLTLKNFTG ENSP00000039007/1-354 MLFNLRILLN NAAFRNGHNF MVRNFRCGQP LQNKVQLKGR DLLTLKNFTG ENSBTAP00000001947/1-354 MLFHLRTLLN NAALRNGHNF VVRNFRCGQP LQDKVQLKGR DLLTLKNFTG bmy_14581T0/1-211 ---------- ---------- ---------- ---------- ---------- BACU003825/1-305 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004664/1-350 EEIKYMLWLS ADLKYRIKQK GEYLPLLQGK -LGMIFEKRS TRTRLSTETG ENSP00000039007/1-354 EEIKYMLWLS ADLKFRIKQK GEYLPLLQGK SLGMIFEKRS TRTRLSTETG ENSBTAP00000001947/1-354 EEIKYMLWLS ADLKFRIKQK GEYLPLLQGK SLGMIFEKRS TRTRLSTETG bmy_14581T0/1-211 ---------- ---------- ---------- ---------- ---------- BACU003825/1-305 -----MLWLS ADLKFRIKQK GEYLPLLQGK SLGMIFEKRS TRTRLSTETG 101 150 ENSTTRP00000004664/1-350 FALLGGHPCF LTTQDIHLGV NESLMDTARV LSSMTDAVLA RVYKQSDLDI ENSP00000039007/1-354 FALLGGHPCF LTTQDIHLGV NESLTDTARV LSSMADAVLA RVYKQSDLDT ENSBTAP00000001947/1-354 FALLGGHPCF LTTDDIHLGV NESLTDTARV LSSMTDAVLA RVYKQSDLDL bmy_14581T0/1-211 ---------- ---------- ---------- ---MTDAVLA RVYKQSDLDI BACU003825/1-305 FALLGGHPCF LTTQDIHLGV NESLMDTARV LSSMTDAVLA RVYKQSDLDI 151 200 ENSTTRP00000004664/1-350 LAKEASIPII NGLSDLYHPI QILADYLTLQ EHYGSLKGLT LSWIGDGNNI ENSP00000039007/1-354 LAKEASIPII NGLSDLYHPI QILADYLTLQ EHYSSLKGLT LSWIGDGNNI ENSBTAP00000001947/1-354 LAKEASIPIV NGLSDLYHPI QILADYLTLQ EHYGSLKGLT LSWIGDGNNI bmy_14581T0/1-211 LAKEASIPII NGLSDLYHPI QILADYLTLQ EHYGSLKGLT LSWIGDGNNI BACU003825/1-305 LAKEASIPII NGLSDLYHPI QILADYLTLQ EHYGSLKGLT LSWIGDGNNI 201 250 ENSTTRP00000004664/1-350 LHSIMMSAAK FGMHLQVATP KGYEPDPGIL KLAEQYTKE- ---------T ENSP00000039007/1-354 LHSIMMSAAK FGMHLQAATP KGYEPDASVT KLAEQYAKE- ---------N ENSBTAP00000001947/1-354 LHSIMMSAAK FGMHLQVATP KGYEPDPSIT KMAEQYAKE- ---------N bmy_14581T0/1-211 LHSIMMSAAK FGMHLQVATP KGYEPDPSIT KLAEQYAKEF FNRLARVCQN BACU003825/1-305 LHSIMMSAAK FGMHLQVATP KGYEPDPSIT KLAEQYAKE- ---------N 251 300 ENSTTRP00000004664/1-350 GTKLSLMNDP LDAARVGDVL VTDTWMSMRH EDE-KRRLQA FQRQDMIM-- ENSP00000039007/1-354 GTKLLLTNDP LEAAHGGNVL ITDTWISMGQ EEEKKKRLQA FQGYQVTMKT ENSBTAP00000001947/1-354 GTKLSLTNDP LEAACGGNVL ITDTWISMGQ EEEKKKRLQA FQGYQVTMKT bmy_14581T0/1-211 GTKLSLMNDP LEAARGGNAL ITDTWISMGQ EEEKKKRLQA FQGYQVTMKT BACU003825/1-305 GTKLSLMNDP LEAARGGNAL ITDTWISMGQ EEEKKKRLQA FQGYQVTMKT 301 350 ENSTTRP00000004664/1-350 AKVAASDWTF LHCLPRKPEE VDDEVFYSPR SLVFPEAENR KWTIMAVM-- ENSP00000039007/1-354 AKVAASDWTF LHCLPRKPEE VDDEVFYSPR SLVFPEAENR KWTIMAVM-- ENSBTAP00000001947/1-354 AKVAAPDWTF LHCLPRKPEE VDDEVFYSPR SLVFPEAENR KWTIMAVM-- bmy_14581T0/1-211 AKVAASDWTF LHCLPRKPEE VDDEVFYSPR SLVFPEAENR KWTI------ BACU003825/1-305 AEVAASDWTF LHCLPRKPEE VDDEVFYSPR SLVFPEAENR KWTIMVLMKG 351 400 ENSTTRP00000004664/1-350 ----VSLLTD YSPQLQKPKF ENSP00000039007/1-354 ----VSLLTD YSPQLQKPKF ENSBTAP00000001947/1-354 ----VSLLTD YSPQLQKPKF bmy_14581T0/1-211 ---------- ---------- BACU003825/1-305 KDDPILIESG YNGQDKASNV