KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:53 2014 Check: 00 .. Name: bmy_06430T0/1-347 Len: 410 Check: 7931 Weight: 1.00 Name: BACU002176/1-399 Len: 410 Check: 4721 Weight: 1.00 Name: ENSP00000408236/1-399 Len: 410 Check: 4885 Weight: 1.00 Name: ENSBTAP00000001963/1-410 Len: 410 Check: 25 Weight: 1.00 Name: ENSTTRP00000007450/1-400 Len: 410 Check: 6053 Weight: 1.00 // 1 50 bmy_06430T0/1-347 MEDGVYEPPD LTPEERMELE NIRRRKQELL VEIQRLREEL SEAMSEVEGL BACU002176/1-399 MEDGVYEPPD LTPEERMELE NIRRRKQELL VEIQRLREEL SEAMSEVEGL ENSP00000408236/1-399 MEDGVYEPPD LTPEERMELE NIRRRKQELL VEIQRLREEL SEAMSEVEGL ENSBTAP00000001963/1-410 MEDGVYEPPD LTPEERMELE NIRRRKQELL VEIQRLREEL SEAMSEVEGL ENSTTRP00000007450/1-400 MEDGVYEPPD LTPEERMELE NIRRRKQELL VEIQRLREEL SEAMSEVEGL 51 100 bmy_06430T0/1-347 EANEGSKTLQ RNRKMAMGRK KFNMDPKKGI QFLVENELLQ NTPEEIARFL BACU002176/1-399 EANEGSKTLQ RNRKMAMGRK KFNMDPKKGI QFLVENELLQ NTPEEIARFL ENSP00000408236/1-399 EANEGSKTLQ RNRKMAMGRK KFNMDPKKGI QFLVENELLQ NTPEEIARFL ENSBTAP00000001963/1-410 EANEGSKTLQ RNRKMAMGRK KFNMDPKKGI QFLVENELLQ NTPEEIARFL ENSTTRP00000007450/1-400 EANEGSKTLQ RNRKMAMGRK KFNMDPKKGI QFLVENELLQ NTPEEIARFL 101 150 bmy_06430T0/1-347 YKGEGLNKTA IGDYLGE--- ---------- ---------- ----RQFLWS BACU002176/1-399 YKGEGLNKTA IGDYLGEREE LNLAVLHAFV DLHEFTDLNL VQALRQFLWS ENSP00000408236/1-399 YKGEGLNKTA IGDYLGEREE LNLAVLHAFV DLHEFTDLNL VQALRQFLWS ENSBTAP00000001963/1-410 YKGEGLNKTA IGDYLGEREE LNLAVLHAFV DLHEFTDLNL VQALRQFLWS ENSTTRP00000007450/1-400 YKGEGLNKTA IGDYLGEREE LNLAVLHAFV DLHEFTDLNL VQALRQFLWS 151 200 bmy_06430T0/1-347 FRLPGEAQKI DRMMEAFAQR YCLCNPGVFQ STDTCYVLSF AVIMLNTSLH BACU002176/1-399 FRLPGEAQKI DRMMEAFAQR YCLCNPGVFQ STDTCYVLSF AVIMLNTSLH ENSP00000408236/1-399 FRLPGEAQKI DRMMEAFAQR YCLCNPGVFQ STDTCYVLSF AVIMLNTSLH ENSBTAP00000001963/1-410 FRLPGEAQKI DRMMEAFAQR YCLCNPGVFQ STDTCYVLSF AVIMLNTSLH ENSTTRP00000007450/1-400 FRLPGEAQKI DRMMEAFAQR YCLCNPGVFQ STDTCYVLSF AVIMLNTSLH 201 250 bmy_06430T0/1-347 NPNVRDKPGL ERFVAMNRGI NEGGDLPEEL LR-----VRP PPLPQPP--- BACU002176/1-399 NHNVRDKPGL ERFVAMNRGI NEGGDLPEEL LRNLYDSIRN EPFKIPEDDG ENSP00000408236/1-399 NPNVRDKPGL ERFVAMNRGI NEGGDLPEEL LRNLYDSIRN EPFKIPEDDG ENSBTAP00000001963/1-410 NPNVRDKPGL ERFVAMNRGI NEGGDLPEEL LRNLYDSIRN EPFKIPEDDG ENSTTRP00000007450/1-400 NPNVRDKPGL ERFVAMNRGI NEGGDLPEEL LRNLYDSIRN EPFKIPEDDG 251 300 bmy_06430T0/1-347 ---------- --QPW----- ---------- -GRVKTWKRR WFILTDNCLY BACU002176/1-399 NDLTHTFFNP DREGWLLKL- ---------- GGRVKTWKRR WFILTDNCLY ENSP00000408236/1-399 NDLTHTFFNP DREGWLLKL- ---------- GGRVKTWKRR WFILTDNCLY ENSBTAP00000001963/1-410 NDLTHTFFNP DREGWLLKLG AQAPSPPSLP GGRVKTWKRR WFILTDNCLY ENSTTRP00000007450/1-400 NDLTHTFFNP DREGWLLKLG ---------- RGRVKTWKRR WFILTDNCLY 301 350 bmy_06430T0/1-347 YFEYTTDKEP RGIIPLENLS IREVDDPRKP NCFELYIRNN KGQLIKACKT BACU002176/1-399 YFEYTTDKEP RGIIPLENLS IREVDDPRKP NCFELYIRNN KGQLIKACKT ENSP00000408236/1-399 YFEYTTDKEP RGIIPLENLS IREVDDPRKP NCFELYIPNN KGQLIKACKT ENSBTAP00000001963/1-410 YFEYTTDKEP RGIIPLENLS IREVDDPRKP NCFELYIPNN KGQLIKACKT ENSTTRP00000007450/1-400 YFEYTTDKEP RGIIPLENLS IREVDDPRKP NCFELYIRNN KGQLIKACKT 351 400 bmy_06430T0/1-347 EADGRVVEGN HMVYRISAPT QEEKDEWIKS IQAAVSVDPF YEMLAARKKR BACU002176/1-399 EADGRVVEGN HMVYRISAPT QEEKDEWIKS IQAAVSVDPF YEMLAARKKR ENSP00000408236/1-399 EADGRVVEGN HMVYRISAPT QEEKDEWIKS IQAAVSVDPF YEMLAARKKR ENSBTAP00000001963/1-410 EADGRVVEGN HMVYRISAPT QEEKDEWIKS IQAAVSVDPF YEMLAARKKR ENSTTRP00000007450/1-400 EADGRVVEGN HMVYRISAPT QEEKDEWIKS IQAAVSVDPF YEMLAARKKR 401 450 bmy_06430T0/1-347 ISVKKKQEQP BACU002176/1-399 ISVKKKQEQP ENSP00000408236/1-399 ISVKKKQEQP ENSBTAP00000001963/1-410 ISVKKKQEQP ENSTTRP00000007450/1-400 ISVKKKQEQP