KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:02 2014 Check: 00 .. Name: ENSP00000365256/1-816 Len: 817 Check: 9519 Weight: 1.00 Name: ENSBTAP00000001973/1-817 Len: 817 Check: 1019 Weight: 1.00 Name: ENSTTRP00000009883/1-746 Len: 817 Check: 8686 Weight: 1.00 Name: BACU009761/1-809 Len: 817 Check: 9961 Weight: 1.00 Name: bmy_18955T0/1-720 Len: 817 Check: 6369 Weight: 1.00 // 1 50 ENSP00000365256/1-816 MAMWQGAMDN RGFQQGSFSS FQNSSSDEDL MDIPATAMDF SMRDDVPPLD ENSBTAP00000001973/1-817 FLFCAGAMDH RGFHQGSFNS FQSSSSDEDL MDIPGTAMDF SMRDDVPPLD ENSTTRP00000009883/1-746 ---------- ---------- ---------- ---------- ---------- BACU009761/1-809 -------MEI RGFQQGSFNS FQSSSSDEDL MDIPGTAMDF SMRDDVPPLD bmy_18955T0/1-720 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000365256/1-816 REVGEDKSYN GGGIGSSNRI MDFLEEPIPG VGTYDDFNTI DWVREKSRDR ENSBTAP00000001973/1-817 GEIEESRSYN GGGIGSSNRM MDFLEEPIPG VGTYDDFNTI DWVREKSRDR ENSTTRP00000009883/1-746 ---------- ---------- MDFLEEPIPG VGTYDDFNTI DWVREKSRDR BACU009761/1-809 GEIEEDKSYN GGGIGSSNRM MDFLEEPIPG VGTYDDFNTI DWVREKSRDR bmy_18955T0/1-720 ---------- ---------M MDFLEEPIPG VGTYDDFNTI DWVREKSRDR 101 150 ENSP00000365256/1-816 DRHREITNKS KESTWALIHS VSDAFSGWLL MLLIGLLSGS LAGLIDISAH ENSBTAP00000001973/1-817 DRHREITNKS KESTWALIHS VSDAFSGWLL MLLIGLLSGS LAGLIDISAH ENSTTRP00000009883/1-746 DRHREITNKS KESTWALIHS VSDAFSGWLL MLLIGLLSGS LAGLIDISAH BACU009761/1-809 DRHREITNKS KESTWALIHS VSDAFSGWLL MLLIGLLSGS LAGLIDISAH bmy_18955T0/1-720 DRHREITNKS KESTWALIHS VSDAFSGWLL MLLIGLLSGS LAGLIDISAH 151 200 ENSP00000365256/1-816 WMTDLKEGIC TGGFWFNHEH CCWNSEHVTF EERDKCPEWN SWSQLIISTD ENSBTAP00000001973/1-817 WMTDLKEGIC TLGIWFNHEH CCWNSNHVTF ENRDKCPEWN SWSQLIISTN ENSTTRP00000009883/1-746 WMTDLKEGIC TGGIWFNHEH CCWNSQHVTF EDRDKCPEWN SWSQLIISTN BACU009761/1-809 WMTDLKEGIC TGGIWFNHEH CCWNSQHVTF EDRDKCPEWN SWSQLIISTN bmy_18955T0/1-720 WMTDLKEGIC TGGIWFNHEH CCWNSQHVTF EDRDKCPEWN SWSQLIISTN 201 250 ENSP00000365256/1-816 EGAFAYIVNY FMYVLWALLF AFLAVSLVKV FAPYACGSGI PEIKTILSGF ENSBTAP00000001973/1-817 EGAFAYIVNY FMYVLWALLF AFLAVSLVKV FAPYACGSGI PEIKTILSGF ENSTTRP00000009883/1-746 EGAFAYIVNY FMYVLWALLF AFLAVSLVKV FAPYACGSGI PEIKTILSGF BACU009761/1-809 EGAFAYIVNY FMYVLWALLF AFLAVSLVKV FAPYACGSGI PEIKTILSGF bmy_18955T0/1-720 EGAFAYIVNY FMYVLWALLF AFLAVSLVKV FAPYACGSGI PEIKTILSGF 251 300 ENSP00000365256/1-816 IIRGYLGKWT LVIKTITLVL AVSSGLSLGK EGPLVHVACC CGNILCHCFN ENSBTAP00000001973/1-817 IIRGYLGKWT LMIKTITLVL AVSSGLSLGK EGPLVHVACC CGNILCHCFN ENSTTRP00000009883/1-746 IIRGYLGKWT LIIKTITLVL AVSSGLSLGK EGPLVHVACC CGNILCHCFN BACU009761/1-809 IIRGYLGKWT LIIKTVTLVL AVSSGLSLGK EGPLVHVACC CGNILCHCFN bmy_18955T0/1-720 IIRGYLGKWT LIIKTITLVL AVSSGLSLGK EGPL------ ---------- 301 350 ENSP00000365256/1-816 KYRKNEAKRR EVLSAAAAAG VSVAFGAPIG GVLFSLEEVS YYFPLKTLWR ENSBTAP00000001973/1-817 KYRKNEAKRR EVLSAAAAAG VSVAFGAPIG GVLFSLEEVS YYFPLKTLWR ENSTTRP00000009883/1-746 KYRKNEAKRR EVLSAAAAAG VSVAFGAPIG GVLFSLEEVS YYFPLKTLWR BACU009761/1-809 KYRKNEAKRR EVLSAAAAAG VSVAFGAPIG GVLFSLEEVS YYFPLKTLWR bmy_18955T0/1-720 ---------- -VLSAAAAAG VSVAFGAPIG GVLFSLEEVS YYFPLKTLWR 351 400 ENSP00000365256/1-816 SFFAALVAAF TLRSINPFGN SRLVLFYVEF HTPWHLFELV PFILLGIFGG ENSBTAP00000001973/1-817 SFFAALVAAF TLRSINPFGN SRLVLFYVEF HTPWHLFELV PFILLGIFGG ENSTTRP00000009883/1-746 SFFAALVAAF TLRSINPFGN SRLVLFYVEF HTPWHLFELV PFILLGIFGG BACU009761/1-809 SFFAALVAAF TLRSINPFGN SRLVLFYVEF HTPWHLFELV PFILLGIFGG bmy_18955T0/1-720 SFFAALVAAF TLRSINPFGN SRLVLFYVEF HTPWHLFELV PFILLGIFGG 401 450 ENSP00000365256/1-816 LWGALFIRTN IAWCRKRKTT QLGKYPVIEV LVVTAITAIL AFPNEYTRMS ENSBTAP00000001973/1-817 LWGALFIRTN IAWCRKRKTT QLGKYPVVEV LVVTAITAIL AFPNEYTRVS ENSTTRP00000009883/1-746 LWGALFIRTN IAWCRKRKTT QLGKYPVIEV LVMTAITAIL AFPNEYTRMS BACU009761/1-809 LWGALFIRTN IAWCRKRKTT QLGKYPVIEV LVVTAITAIL AFPNEYTRMS bmy_18955T0/1-720 LWGALFIRTN IAWCRKRKTT QLGKYPVIEV LVVTAITAIL AFPNEYTRMS 451 500 ENSP00000365256/1-816 TSELISELFN DCGLLDSSKL CDYENRFNTS KGGELPDRPA GVGVYSAMWQ ENSBTAP00000001973/1-817 TSELISELFN DCGLLDSSKL CDYENRFNTS KAGELPDRPA GVGVYSAMWQ ENSTTRP00000009883/1-746 TSELISELFN DCGLLDSSKL CDYENRFNTS KAGELPDRPA GVGVYSAMWQ BACU009761/1-809 TSELISELFN DCGLLDSSKL CDYENRFNTS KAGELPDRPA GVGVYSAMWQ bmy_18955T0/1-720 TSELISELFN DCGLLDSSKL CDYENRFNTS KAGELPDRPA GVGVYSAMWQ 501 550 ENSP00000365256/1-816 LALTLILKIV ITIFTFGMKI PSGLFIPSMA VGAIAGRLLG VGMEQLAYYH ENSBTAP00000001973/1-817 LALTLILKIV ITIFTFGMKI PSGLFIPSMA VGAIAGRLLG VGMEQLAYYH ENSTTRP00000009883/1-746 LALTLILKIV ITIFTFGMKI PSGLFIPSMA VGAIAGRLLG VGMEQLAYYH BACU009761/1-809 LALTLILKIV ITIFTFGMKI PSGLFIPSMA VGAIAGRLLG VGMEQLAYYH bmy_18955T0/1-720 LALTLILKIV ITIFTFGMKI PSGLFIPSMA VGAIAGRLLG VGMEQLAYYH 551 600 ENSP00000365256/1-816 QEWTVFNSWC SQGADCITPG LYAMVGAAAC LGGVTRMTVS LVVIMFELTG ENSBTAP00000001973/1-817 HDWAIFNSWC SQGADCITPG LYAMVGAAAC LGGVTRMTVS LVVIMFELTG ENSTTRP00000009883/1-746 HDWAIFNSWC SQGADCITPG LYAMVGAAAC LGGVTRMTVS LVVIMFELTG BACU009761/1-809 HDWAIFNSWC SQGADCITPG LYAMVGAAAC LGGVTRMTVS LVVIMFELTG bmy_18955T0/1-720 HDWAIFNSWC SQGADCITPG LYAMVGAAAC LGGVTRMTVS LVVIMFELTG 601 650 ENSP00000365256/1-816 GLEYIVPLMA AAMTSKWVAD ALGREGIYDA HIRLNGYPFL EAKEEFAHKT ENSBTAP00000001973/1-817 GLEYIVPLMA AAMTSKWVAD ALGREGIYDA HIRLNGYPFL EAKEEFAHKT ENSTTRP00000009883/1-746 GLEYIVPLMA AAMTSKWVAD ALGREGIYDA HIRLNGYPFL EAKEEFAHKT BACU009761/1-809 GLEYIVPLMA AAMTSKWVAD ALGREGIYDA HIRLNGYPFL EAKEEFAHKT bmy_18955T0/1-720 GLEYIVPLMA AAMTSKWVAD ALGREGIYDA HIRLNGYPFL EAKEEFAHKT 651 700 ENSP00000365256/1-816 LAMDVMKPRR NDPLLTVLTQ DSMTVEDVET IISETTYSGF PVVVSRESQR ENSBTAP00000001973/1-817 LAMDVMKPRR NDPLLTVLTQ DSMTVEDVET IISETTYSGF PVVVSRESQR ENSTTRP00000009883/1-746 LAMDVMKPRR NDPLLTVLTQ DSMTVEDVET IISETTYSGF PVVVSRESQR BACU009761/1-809 LAMDVMKPRR NDPLLTVLTQ DSMTVEDVET IISETTYSGF PVVVSRESQR bmy_18955T0/1-720 LAMDVMKPRR NDPLLTVLTQ DSMTVEDVET IISETTYSGF PVVVSRESQR 701 750 ENSP00000365256/1-816 LVGFVLRRDL IISI-ENARK KQDGVVSTSI IYFTEHSPPL PPYTPPTLKL ENSBTAP00000001973/1-817 LVGFVLRRDL IISIVENARK KQDGVVSTSV IYFTEHSPPV PPYTPPTLKL ENSTTRP00000009883/1-746 LVGFVLRRDL IISI-ENARK KQDGVVSTSV IYFTEHSPPV PPYTPPTLKL BACU009761/1-809 LVGFVLRRDL IISI-ENARK KQDGVVSTSV IYFTEHSPPM PPYTPPTLKL bmy_18955T0/1-720 LVGFVLRRDL IISI-ENARK KQDGVVSTSV IYFTEHSPPM PPYTPPTLKL 751 800 ENSP00000365256/1-816 RNILDLSPFT VTDLTPMEIV VDIFRKLGLR QCLVTHNGRL LGIITKKDVL ENSBTAP00000001973/1-817 RNILDLSPFT VTDLTPMEIV VDIFRKLGLR QCLVTHNGRL LGIITKKDVL ENSTTRP00000009883/1-746 RNILDLSPFT VTDLTPMEIV VDIFRKLGLR QCLVTHNGRL LGIITKKDVL BACU009761/1-809 WNILDLSPFT VTDLTPMEIV VDIFRKLGLR QCLVTHNGRL LGIITKKDVL bmy_18955T0/1-720 RNILDLSPFT VTDLTPMEIV VDIFRKLGLR QCLVTHNGRL LGIITKKDVL 801 850 ENSP00000365256/1-816 KHIAQMANQD PDSILFN ENSBTAP00000001973/1-817 KHIAQMANQD PDSILFN ENSTTRP00000009883/1-746 KHIAQMANQD PDSILFN BACU009761/1-809 KHIAQMANQD PDSILFN bmy_18955T0/1-720 KHIAQMANQD PDSILFN