KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:02 2014 Check: 00 .. Name: BACU000952/1-407 Len: 412 Check: 9050 Weight: 1.00 Name: bmy_10949T0/1-355 Len: 412 Check: 558 Weight: 1.00 Name: ENSP00000228741/1-407 Len: 412 Check: 6327 Weight: 1.00 Name: ENSBTAP00000001974/1-402 Len: 412 Check: 8616 Weight: 1.00 Name: ENSTTRP00000000252/1-403 Len: 412 Check: 7201 Weight: 1.00 // 1 50 BACU000952/1-407 MESAITLWQF LLQLLLDQKH EHLICWTSND GEFKLLKAEE VAKLWGLRKN bmy_10949T0/1-355 -------MSL LPVSLMHSSF PRLL------ ---------- ---------- ENSP00000228741/1-407 MESAITLWQF LLQLLLDQKH EHLICWTSND GEFKLLKAEE VAKLWGLRKN ENSBTAP00000001974/1-402 MESAITLWQF LLQLLLDQKH EHLICWTSND GEFKLLKAEE VAKLWGLRKN ENSTTRP00000000252/1-403 MESAITLWQF LLQLLLDQKH EHLICWTSND GEFKLLKAEE VAKLWGLRKN 51 100 BACU000952/1-407 KTNMNYDKLS RALRYYYDKN IIKKVIGQKF VYKFVSFPEI LKMDPHAVEI bmy_10949T0/1-355 ---------- -----LCSQN IIKKVIGQKF VYKFVSFPEI LKMDPHAVEI ENSP00000228741/1-407 KTNMNYDKLS RALRYYYDKN IIKKVIGQKF VYKFVSFPEI LKMDPHAVEI ENSBTAP00000001974/1-402 KTNMNYDKLS RALRYYYDKN IIKKVIGQKF VYKFVSFPEI LKMDPHAVEI ENSTTRP00000000252/1-403 KTNMNYDKLS RALRYYYDKN IIKKVIGQKF VYKFVSFPEI LKMDPHAVEI 101 150 BACU000952/1-407 SRESLLLQDS ECKAPPESRE AHRHGLSALK SASRNEYIHS GLYSSFTINS bmy_10949T0/1-355 SRESLLLQDS ECKAPPESRE AHRHGLSALK SASRNEYIHS GLYSSFTINS ENSP00000228741/1-407 SRESLLLQDS DCKASPEGRE AHKHGLAALR STSRNEYIHS GLYSSFTINS ENSBTAP00000001974/1-402 SRESLLLQDS ECKVPPEGRE AHRHGLSALK SASRNEYIHS GLYSSFTINS ENSTTRP00000000252/1-403 SRESLLLQDS ECKAPPESRE AHRHGLSALK SASRNEYIHS GLYSSFTINS 151 200 BACU000952/1-407 LQNPPESLKA IKTEKLEEQP EDSPPVEEVR TVIRFVTNKT DKHISRPVVS bmy_10949T0/1-355 LQNPPESLKA IKTEKLEEQP EDSPPVEEVR TVIRFVTNKT DKHISRPVVS ENSP00000228741/1-407 LQNPPDAFKA IKTEKLEEPP EDSPPVEEVR TVIRFVTNKT DKHVTRPVVS ENSBTAP00000001974/1-402 LQNPPEPLKA IKTEKLEEQL EDSPPAEEVR TVIRFVTNKT DKHVSRPVVS ENSTTRP00000000252/1-403 LQNPPESLKA IKTEKLEEPP EDSPPVEEVR TVIRFVTNKT DKHISRPVVS 201 250 BACU000952/1-407 LPSTSE---- -AFLASSVSA KISSLMLPNA AASISSASPS SSRSPSLSPN bmy_10949T0/1-355 LPSTSE---- -AFLASSVSA KISSLMLPNA AASISSASPS SSRSPSLSPN ENSP00000228741/1-407 LPSTSEAAAA SAFLASSVSA KISSLMLPN- AASISSASPF SSRSPSLSPN ENSBTAP00000001974/1-402 LPSTSE---- -AFLASSVSA KISSLMLPN- AASISSASPS SSRSPSLSPN ENSTTRP00000000252/1-403 LPSTSE---- -AFLASSVSA KISSLMLPNA AASISSASPS SSRSPSLSPN 251 300 BACU000952/1-407 SPLPSEHRSL FLEAACHDSD SLEPLNLSSG SKTRSPSLPP KAKKPKGLEI bmy_10949T0/1-355 SPLPSEHRSL FLEAACHDSD SLEPLNLSSG SKTRSPSLPP KAKKPKGLEI ENSP00000228741/1-407 SPLPSEHRSL FLEAACHDSD SLEPLNLSSG SKTKSPSLPP KAKKPKGLEI ENSBTAP00000001974/1-402 SPLPSEHRSL FLEAACHDSD SLEPLNLSSG SKTRSPSLPP KAKKPKGLEI ENSTTRP00000000252/1-403 SPLPSEHRSL FLEAACHDSD SLEPLNLSSG SKTRSPSLPP KAKKPKGLEI 301 350 BACU000952/1-407 SAPPLVLSGT DIGSIALNSP ALPSGSLTPA FFTAQVRAVP VVLAAPRLSG bmy_10949T0/1-355 SAPPLVLSGT DIGSIALNSP ALPSGSLTPA FFTAQTPNGL LLTPSPLLSS ENSP00000228741/1-407 SAPPLVLSGT DIGSIALNSP ALPSGSLTPA FFTAQTPNGL LLTPSPLLSS ENSBTAP00000001974/1-402 SAPPLVLSGT DIGSIALNSP ALPSGSLTPA FFTAQTPNGL LLTPSPLLSS ENSTTRP00000000252/1-403 SAPPLVLSGT DIGSIALNSP ALPSGSLTPA FFTAQTPNGL LLTPSPLLSS 351 400 BACU000952/1-407 LAEGRKEQPK QLPSALQRVI RGSLWQSHCV IVQGNYFSMP RWEHTQEERL bmy_10949T0/1-355 IHFWSSLSPV APLSPARLQG PNTLFQFPTL LNGHMPVPIP SLDRAASPVL ENSP00000228741/1-407 IHFWSSLSPV APLSPARLQG PSTLFQFPTL LNGHMPVPIP SLDRAASPVL ENSBTAP00000001974/1-402 IHFWSSLSPV APLSPARLQG PSTLFQFPTL LNGHMPVPIP SLDRAASPVL ENSTTRP00000000252/1-403 IHFWSSLSPV APLSPARLQG PNTLFQFPTL LNGHMPVPIP SLDRAASPVL 401 450 BACU000952/1-407 RVLATVGCLI GF bmy_10949T0/1-355 LSSNSQKS-- -- ENSP00000228741/1-407 LSSNSQKS-- -- ENSBTAP00000001974/1-402 LSSNSQKS-- -- ENSTTRP00000000252/1-403 LSSNSQKS-- --