KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:03 2014 Check: 00 .. Name: ENSTTRP00000006448/1-840 Len: 891 Check: 7738 Weight: 1.00 Name: ENSP00000284637/1-888 Len: 891 Check: 7888 Weight: 1.00 Name: ENSBTAP00000001976/1-709 Len: 891 Check: 5494 Weight: 1.00 Name: BACU015216/1-741 Len: 891 Check: 7424 Weight: 1.00 Name: bmy_15283T0/1-584 Len: 891 Check: 1530 Weight: 1.00 // 1 50 ENSTTRP00000006448/1-840 MDESALLDLL ECPVCLERLD VSARVLPCQH TFCKRCLLGI VGSRNELRCP ENSP00000284637/1-888 MDESALLDLL ECPVCLERLD ASAKVLPCQH TFCKRCLLGI VGSRNELRCP ENSBTAP00000001976/1-709 ---------- ---------- ---------- ---------- ---------- BACU015216/1-741 --METNVSFG SAPVKSRRPP GRSGLWVATQ GVCLEVPVLC EFVQKEEHRL bmy_15283T0/1-584 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006448/1-840 ECRTLVGAGV EQLPSNILLV RLLDGIKQRP WKPGPAGGSG TNCTNASRAQ ENSP00000284637/1-888 ECRTLVGSGV EELPSNILLV RLLDGIKQRP WKPGPGGGSG TNCTNALRSQ ENSBTAP00000001976/1-709 ---------- ---------- ---------- ---------- ---------- BACU015216/1-741 QRRTRFQAPC VPGGRPFLL- ---------- -------GGG SDGTSAPRPL bmy_15283T0/1-584 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006448/1-840 SSAVANCSSK DPPCPQGGQQ PR-AQAWSPP VRGIPQLPCA KALYNYEGKE ENSP00000284637/1-888 SSTVANCSSK DLQSSQGGQQ PR-VQSWSPP VRGIPQLPCA KALYNYEGKE ENSBTAP00000001976/1-709 ---------- ---------- ---------- --GIPQLPCA KALYNYEGKE BACU015216/1-741 AAVYTLYFSW SSRHPEDEIR PREVRLLRIT QQGIPQLPCA KALYNYEGKE bmy_15283T0/1-584 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000006448/1-840 PGDLKFSKGD IIILRRQVDE NWYHGEVNGV HGFFPTNFVQ IIKPLPQPPP ENSP00000284637/1-888 PGDLKFSKGD IIILRRQVDE NWYHGEVNGI HGFFPTNFVQ IIKPLPQPPP ENSBTAP00000001976/1-709 PGDLKFSKGD IIVLRRQVDE NWYHGEVGGV HGFFPTNFVQ IIKPLPQPPP BACU015216/1-741 PGDLKFSKGD IIILRRQVDE NWYHGEVNGV HGFFPTNFVQ IIKPLPQPPP bmy_15283T0/1-584 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000006448/1-840 QCKALYDFEV KDKEADKDCL PFAKDDVLTV IRRVDENWAE GMLADKIGIF ENSP00000284637/1-888 QCKALYDFEV KDKEADKDCL PFAKDDVLTV IRRVDENWAE GMLADKIGIF ENSBTAP00000001976/1-709 QCKALYDFEV KDKEADKDCL PFAKDDVLTV IRRVDENWAE GMLADKIGIF BACU015216/1-741 QCKALYDFEV KDKEADKDCL PFAKDDVLTV IRRVDENWAE GMLADKIGIF bmy_15283T0/1-584 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000006448/1-840 PISYVEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000284637/1-888 PISYVEFNSA AKQLIEWDKP PVPGVDAGEC SSAAAQSSTA PKHSDTKKNT ENSBTAP00000001976/1-709 PISYVEFNSA AKQLIEWDQP PGPGVAAGEG ALATTPSSTT TKQPDGKKNT BACU015216/1-741 PISYVEFNSA AKQLIEWDQP PAGGVGAGEG APAAAPSSAA PKQPEAKKNT bmy_15283T0/1-584 ----MEFNSA AKQLIEWDQP PAGGVGAGEG APAAAPSSAA PKQPEAKKNT 301 350 ENSTTRP00000006448/1-840 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000284637/1-888 KKRHSFTSLT MANKSSQASQ NRHSMEISPP VLISSSNPTA AARISELSGL ENSBTAP00000001976/1-709 KKRHSFTSLS MASKASQAAQ QRHSMEISPP VLISSSNPAA AARIGELAGL BACU015216/1-741 KKRHSFTSLT TASKASQATQ QRHSMEISPP VLISSSNPTA AARIGELAGL bmy_15283T0/1-584 KKRHSFTSLT TASKASQATQ QRHSMEISPP VLISSSNPTA AARIGELAGL 351 400 ENSTTRP00000006448/1-840 XXXXXXXVHI STTGLIVTPP PSSPVTTGPS CTVPPEAPYP AALS-TMNPP ENSP00000284637/1-888 SCSAPSQVHI STTGLIVTPP PSSPVTTGPS FTFPSDVPYQ AALG-TLNPP ENSBTAP00000001976/1-709 SCSAPSQVHI STTGLIVTPP PSSPVTTGPS FTFPAEAPYP AALA-TLNPP BACU015216/1-741 SCSAPSQVHI STTGLIVTPP PSSPVTTGPS STVPPEAPYP AALS-TMNPP bmy_15283T0/1-584 SCSAPSQVHI STTGLIVTPP PSSPVTTGPS STVPPEAPYP AALSVSVHHR 401 450 ENSTTRP00000006448/1-840 LPPPPLQEAT ------PMGA --VAAPGMGS RPVAGPADQT THSRPQTRPS ENSP00000284637/1-888 LPPPPLLAAT VLASTPPGAT AAAAAAGMGP RPMAGSTDQI AHLRPQTRPS ENSBTAP00000001976/1-709 LPPPPLQAAT ------PTGT AVAAAAGMGP RPTAGPTDQT THPRPQPRPS BACU015216/1-741 LPPPPLQAAT ------PMGA --VAASGLGS RPVAGPTDQT AHSRPQTRPS bmy_15283T0/1-584 LTPDPRACRS ------QTRR --IYRSTEG- ---AGILEAV CLKSTVFSSS 451 500 ENSTTRP00000006448/1-840 VYVAIYPYTP RKEDELELRK GEMFLVFERC QDGWFKGTSM HTSKIGVFPG ENSP00000284637/1-888 VYVAIYPYTP RKEDELELRK GEMFLVFERC QDGWFKGTSM HTSKIGVFPG ENSBTAP00000001976/1-709 VYVAIYPYTP RKEDELELRK GEMFLVFERC QDGWFKGTSM HTSKIGVFPG BACU015216/1-741 VYVAIYPYTP RKEDELELRK GEMFLVFERC QDGWFKGMST HTSKIGVLPG bmy_15283T0/1-584 RYVAIYPYTP RKEDELELRK GEMFLVFERC QDGWFKGTSM HTSKIGVFPG 501 550 ENSTTRP00000006448/1-840 NYVAPVTRAA TSASQGKVPV STAGQTSRGG GPASTSPAGA PAQKPPGNGM ENSP00000284637/1-888 NYVAPVTRAV TNASQAKVPM STAGQTSRGV TMVSPSTAGG PAQKLQGNGV ENSBTAP00000001976/1-709 NYVAPVTRAV TSASQGKVPM LTTGPASRGG VLANPPSTGG PAQKPPGNGV BACU015216/1-741 NYVAPVTRAV TSASQGKVPV STAGQTSRGG GPASPAPAGA PAQKPPGNGM bmy_15283T0/1-584 NYVAPVTRAV TSASQGKVPV STAGQTSRGG GPASPSPAGA PAQKPPGNGM 551 600 ENSTTRP00000006448/1-840 AGGPG-VPTA VVSAAHIQTS PQAKVLLHMS GQMTVNQARS AVRTVSAHSQ ENSP00000284637/1-888 AGSPSVVPAA VVSAAHIQTS PQAKVLLHMT GQMTVNQARN AVRTVAAHNQ ENSBTAP00000001976/1-709 AGGPG-VPTA VVSAAHVQTS PQAKVLLHAS GQMTVNQARS AARTVSAHSQ BACU015216/1-741 AGGPG-VPTA VVSAAHIQTS PQAKVLLHMS GQMTVNQARS AVRTVSAHSQ bmy_15283T0/1-584 AGGPG-VPTA VVSAAHIQTS PQAKVLLHMS GQMTVNQARS SVRTVSAHSQ 601 650 ENSTTRP00000006448/1-840 ERPTAAVTPI QVQSAA---- ---GLPHHPL ASPQPPGPM- GPPAHVAAGS ENSP00000284637/1-888 ERPTAAVTPI QVQNAAGLSP ASVGLSHHSL ASPQPAPLMP GSATHTAAIS ENSBTAP00000001976/1-709 ERPTAAVTPI QVQSTP---- ---GQSHHPL VSPQPPAPL- GPPAHAAASG BACU015216/1-741 ERPMAAVTPI QVQSAA---- ---GLPHHPL ASPQPPGPM- GPPAHVAAGS bmy_15283T0/1-584 ERPTAAVTPI QVQSAA---- ---GLPHHPL ASPQPPGPM- GPPAHVAAGS 651 700 ENSTTRP00000006448/1-840 LGRVGAPLAC AAA----PPS LPAASLETEP GGRPVTVLPG PPTSPDSSSA ENSP00000284637/1-888 ISRASAPLAC AAAAPLTSPS ITSASLEAEP SGRIVTVLPG LPTSPDSASS ENSBTAP00000001976/1-709 LGRVGGPLAC ATA----PAS IPAASLEPEP SSRPATLLPG TPTSPDSGSA BACU015216/1-741 LGRVGAPLAC AAA----PPS LPAASLETEP GGRPVTMLPG PPTSPDSGSA bmy_15283T0/1-584 LGRVGASLAC AAA----PPS LPAASLETEP GGRPVTMLPG PPTSPDSGSA 701 750 ENSTTRP00000006448/1-840 A-------KP DKDSKXXXXX XXXXXXXXXX XXXXXXXXPA SPTLDVEP-A ENSP00000284637/1-888 ACGNSSATKP DKDSKKEKKG LLKLLSGAST KRKPRVSPPA SPTLEVELGS ENSBTAP00000001976/1-709 A-------RP DKDGKKEKKG LLKLLSGAST KRKPRGSPPA SPTLDAELGA BACU015216/1-741 A-------KP DKDSKVT--- ---------- ---------- ---------- bmy_15283T0/1-584 A-------KP DKDSKKERKG LLKLLSGAST KRKPRGSPPA SPTLDVEPGA 751 800 ENSTTRP00000006448/1-840 ELLP------ GPLAPLR--- ----CPGPVA DTPAPAPAHA PP------RR ENSP00000284637/1-888 AELPLQGAVG PELPPGGGHG RAGSCPVD-G DGPVTTAVAG AALAQDAFHR ENSBTAP00000001976/1-709 ELSC-----G PPGPPCA--- ----CPGP-C DGD--TMAPG P-------QR BACU015216/1-741 ---------- ---------- ----TPRA-C ---------- ---------- bmy_15283T0/1-584 ELLP-----G APGAPCA--- ----CPGP-C DADPPAPAPG P-------QR 801 850 ENSTTRP00000006448/1-840 PDCSLDSA-P VAPPPRQPCS SLGPAAGDAR PAVCERHRVV VSYPPQSEAE ENSP00000284637/1-888 KASSLDSAVP IAPPPRQACS SLGPVLNESR PVVCERHRVV VSYPPQSEAE ENSBTAP00000001976/1-709 RASSLDSA-P VAPPPRQPCS SLGPAASEVR PAVCERHRVV VSYPPQSEAE BACU015216/1-741 ---------- ---------- ---PATGARL SAVRPWHRVV VSYPPQSEAE bmy_15283T0/1-584 RTCSLDSA-P VAPPPRQPCS SLGPAAGDAR PAVCERHRVV VSYPPQSEAE 851 900 ENSTTRP00000006448/1-840 LELKEGDIVF VHRKREDGWF KGTLQRNGKT GLFPGSFVEN I ENSP00000284637/1-888 LELKEGDIVF VHKKREDGWF KGTLQRNGKT GLFPGSFVEN I ENSBTAP00000001976/1-709 LELKEGDIVF VHKKREDGWF KGTLQRNGKT GLFPGSFVEN I BACU015216/1-741 LELKEGDIVF VHRKREDGWF KGTLQRNGKT GLFPGSFVEN I bmy_15283T0/1-584 LELKEGDIVF VHRKREDGWF KGTLQRNGKT GLFPGSFVEN I