KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:03 2014 Check: 00 .. Name: ENSTTRP00000000253/1-517 Len: 575 Check: 971 Weight: 1.00 Name: bmy_10950T0/1-480 Len: 575 Check: 1234 Weight: 1.00 Name: ENSBTAP00000001977/1-526 Len: 575 Check: 2525 Weight: 1.00 Name: ENSP00000261211/1-523 Len: 575 Check: 7889 Weight: 1.00 Name: BACU000951/1-575 Len: 575 Check: 1990 Weight: 1.00 // 1 50 ENSTTRP00000000253/1-517 ---------- ---------- ---------- ---------- ---------- bmy_10950T0/1-480 ---------- ---------- ---------- ---MLYEYGI NSRFFKSHSV ENSBTAP00000001977/1-526 ---------- ---------- ---------- ---------- ---------V ENSP00000261211/1-523 ---------- ---------- ---------- ---------- ---------- BACU000951/1-575 MDVRIPHFIL ILKIPSKSRT TFFWSCKIFI ALILCSFCSL LSGFFKSHSV 51 100 ENSTTRP00000000253/1-517 --MKKFKRRL SLTLRGSQTI DESLSELAEQ MTIEENSSKD NEPIVKNGRP bmy_10950T0/1-480 DRMKKFKRRL SLTLRGSQTI DESLSELAEQ MTIEENSSKD N--------- ENSBTAP00000001977/1-526 DRMKKFKRRL SLTLRGSQTI DESLSELAEQ MTIEENSSKD NEPIVKNGRP ENSP00000261211/1-523 --MKKFKRRL SLTLRGSQTI DESLSELAEQ MTIEENSSKD NEPIVKNGRP BACU000951/1-575 DRMKKFKRRL SLTLRGSQTI DESLSELAEQ MTIEENSSKD NEPIVKNGRP 101 150 ENSTTRP00000000253/1-517 PTSHSMHSFL HQYTGSFKKP PLRRPHSVIG GSLGSFMAMP RNGSRLDIVH bmy_10950T0/1-480 ---------- ---------- ---------- ---------- ------DIVH ENSBTAP00000001977/1-526 PTSHSMHSFL HQYTGSFKKP PLRRPHSVIG GSLGSFMAMP RNGSRLDIVH ENSP00000261211/1-523 PTSHSMHSFL HQYTGSFKKP PLRRPHSVIG GSLGSFMAMP RNGSRLDIVH BACU000951/1-575 PTSHSMHSFL HQYTGSFKKP PLRRPHSVIG GSLGSFMAMP RNGSRLDIVH 151 200 ENSTTRP00000000253/1-517 ENLKMGSDGE SDQASGTSSD EVQSPTGVCL RNRIHRRISM EDLNKRLSLP bmy_10950T0/1-480 ENLKMGSDGE SDQASGTSSD EVQSPTGVCL RNRIHRRISM EDLNKRLSLP ENSBTAP00000001977/1-526 ENLKMGSDGE SDQASGTSSD EVQSPTGVCL RNRIHRRISI EDLNKRLSLP ENSP00000261211/1-523 ENLKMGSDGE SDQASGTSSD EVQSPTGVCL RNRIHRRISM EDLNKRLSLP BACU000951/1-575 ENLKMGSDGE SDQASGTSSD EVQSPTGVCL RNRIHRRISM EDLNKRLSLP 201 250 ENSTTRP00000000253/1-517 ADIRIPDGYL EKLQINSPPF DQPMSRRSRR ASL------K METYIKLEKL bmy_10950T0/1-480 ADIRIPDGYL EKLQINSPPF DQPMSRRSRR ASLSEIGFGK METYIKLEKL ENSBTAP00000001977/1-526 ADIRIPDGYL EKLQINSPPF DQPMSRRSRR ASLSEIGFGK METYIKLEKL ENSP00000261211/1-523 ADIRIPDGYL EKLQINSPPF DQPMSRRSRR ASLSEIGFGK METYIKLEKL BACU000951/1-575 ADIRIPDGYL EKLQINSPPF DQPMSRRSRR ASLSEIGFGK METYIKLEKL 251 300 ENSTTRP00000000253/1-517 GEGTYATVYK GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSLLKDLKHA bmy_10950T0/1-480 GEGTYATVYK GRSKLTENLV ALKEIRLEHE EGAPCTAIRE VSLLKDLKHA ENSBTAP00000001977/1-526 GEGTYATVYK GRSKLTENLV ALKEIRLEHE EGAPCTAIRE VSLLKDLKHA ENSP00000261211/1-523 GEGTYATVYK GRSKLTENLV ALKEIRLEHE EGAPCTAIRE VSLLKDLKHA BACU000951/1-575 GEGTYATVYK GRSKLTENLV ALKEIRLEHE EGAPCTAIRE VSLLKDLKHA 301 350 ENSTTRP00000000253/1-517 NIVTLHDIVH TDKSLTLVFE YLDKDLKQYM DDCGNIMSMH NVKLFLYQIL bmy_10950T0/1-480 NIVTLHDIVH TDKSLTLVFE YLDKDLKQYM DDCGNIMSMH NVKLFLYQIL ENSBTAP00000001977/1-526 NIVTLHDIVH TDKSLTLVFE YLDKDLKQYM DDCGNIMSMH NVKLFLYQIL ENSP00000261211/1-523 NIVTLHDIVH TDKSLTLVFE YLDKDLKQYM DDCGNIMSMH NVKLFLYQIL BACU000951/1-575 NIVTLHDIVH TDKSLTLVFE YLDKDLKQYM DDCGNIMSMH NVKLFLYQIL 351 400 ENSTTRP00000000253/1-517 RGLAYCHRRK VLHRDLKPQN LLINEKGELK LADFGLARAK SVPTKTYSNE bmy_10950T0/1-480 RGLAYCHRRK VLHRDLKPQN LLINEKGELK LADFGLARAK SVPTKTYSNE ENSBTAP00000001977/1-526 RGLAYCHRRK VLHRDLKPQN LLINEKGELK LADFGLARAK SVPTKTYSNE ENSP00000261211/1-523 RGLAYCHRRK VLHRDLKPQN LLINEKGELK LADFGLARAK SVPTKTYSNE BACU000951/1-575 RGLAYCHRRK VLHRDLKPQN LLINEKGELK LADFGLARAK SVPTKTYSNE 401 450 ENSTTRP00000000253/1-517 VVTLWYRPPD VLLGSSEYST QIDMWGVGCI FFEMASGRPL FPGSTVEDEL bmy_10950T0/1-480 VVTLWYRPPD VLLGSSEYST QIDMWGVGCI FFEMASGRPL FPGSTVEDEL ENSBTAP00000001977/1-526 VVTLWYRPPD VLLGSSEYST QIDMWGVGCI FFEMASGRPL FPGSTVEDEL ENSP00000261211/1-523 VVTLWYRPPD VLLGSSEYST QIDMWGVGCI FFEMASGRPL FPGSTVEDEL BACU000951/1-575 VVTLWYRPPD VLLGSSEYST QIDMWGVGCI FFEMASGRPL FPGSTVEDEL 451 500 ENSTTRP00000000253/1-517 HLIFRLLGTP SQETWPGVSS NDEFKNYNFP KYKPQPLINH APRLDSEGIE bmy_10950T0/1-480 HLIFRLLGTP SQETWPGVSS NDEFKNYNFP KYKPQPLINH APSEQE---- ENSBTAP00000001977/1-526 HLIFRLLGTP SQENWPGVSS NDEFKNYNFP KYKPQPLINH APRLDSEGIE ENSP00000261211/1-523 HLIFRLLGTP SQETWPGISS NEEFKNYNFP KYKPQPLINH APRLDSEGIE BACU000951/1-575 HLIFRLLGTP CQETWPGVSS NDEFKNYNFP KYKPQPLINH APRLDSEGIE 501 550 ENSTTRP00000000253/1-517 LITKFLQYES KKRVSAEEAM KHVYFRSLGP RIHALPESVS IFSLKEIQLQ bmy_10950T0/1-480 -LPKY--YES KKRVSAEEAM KHVYFRSLGP RIHALPESVS IFSLKEIQLQ ENSBTAP00000001977/1-526 LITKFLQYES KKRVSAEEAM KHVYFRSLGP RIHALPESVS IFSLKEIQLQ ENSP00000261211/1-523 LITKFLQYES KKRVSAEEAM KHVYFRSLGP RIHALPESVS IFSLKEIQLQ BACU000951/1-575 LITKFLQYES KKRVSAEEAM KHVYFRSLGP RIHALPESVS IFSLKEIQLQ 551 600 ENSTTRP00000000253/1-517 KDPGFRNSSY PETGHGKNRR QSMLF bmy_10950T0/1-480 KDPGFRNSSY PETGVFVINH FTCRS ENSBTAP00000001977/1-526 KDPGFRNSSY PETGHAKTEK HSALF ENSP00000261211/1-523 KDPGFRNSSY PETGHGKNRR QSMLF BACU000951/1-575 KDPGFRNSSY PETGHGKNRR QSMLF