KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:04 2014 Check: 00 .. Name: ENSP00000384371/1-706 Len: 706 Check: 2800 Weight: 1.00 Name: ENSBTAP00000001978/1-706 Len: 706 Check: 9597 Weight: 1.00 Name: ENSTTRP00000016333/1-699 Len: 706 Check: 4897 Weight: 1.00 Name: bmy_04466T0/1-661 Len: 706 Check: 3181 Weight: 1.00 Name: BACU016532/1-706 Len: 706 Check: 654 Weight: 1.00 // 1 50 ENSP00000384371/1-706 MASPADSCIQ FTRHASDVLL NLNRLRSRDI LTDVVIVVSR EQFRAHKTVL ENSBTAP00000001978/1-706 MASPADSCIQ FTRHASDVLL NLNRLRSRDI LTDVVIVVSR EQFRAHKTVL ENSTTRP00000016333/1-699 MASPADSCIQ FTRHASDVLL NLNRLRSRDI LTDVVIVVSR EQFRAHKTVL bmy_04466T0/1-661 MASPADSCIQ FTRHASDVLL NLNRLRSRDI LTDVVIVVSR EQFRAHKTVL BACU016532/1-706 MASPADSCIQ FTRHASDVLL NLNRLRSRDI LTDVVIVVSR EQFRAHKTVL 51 100 ENSP00000384371/1-706 MACSGLFYSI FTDQLKCNLS VINLDPEINP EGFCILLDFM YTSRLNLREG ENSBTAP00000001978/1-706 MACSGLFYSI FTDQLKCNLS VINLDPEINP EGFCILLDFM YTSRLNLREG ENSTTRP00000016333/1-699 MACSGLFYSI FTDQLKCNLS VINLDPEINP EGFCILLDFM YTSRLNLREG bmy_04466T0/1-661 MACSGLFYSI FTDQLKCNLS VINLDPEINP EGFCILLDFM YTSRLNLREG BACU016532/1-706 MACSGLFYSI FTDQLKCNLS VINLDPEINP EGFCILLDFM YTSRLNLREG 101 150 ENSP00000384371/1-706 NIMAVMATAM YLQMEHVVDT CRKFIKASEA EMVSAIKPPR EEFLNSRMLM ENSBTAP00000001978/1-706 NIMAVMATAM YLQMEHVVDT CRKFIKASEA EMVPAIKPPR EDFLNSRMLM ENSTTRP00000016333/1-699 NIMAVMATAM YLQMEHVVDT CRKFIKASEA EMVPAIKPPR EDFLNSRMLM bmy_04466T0/1-661 NIMAVMATAM YLQMEHVVDT CRKFIKASEA EMVPAIKPPR EDFLNSRMLM BACU016532/1-706 NIMAVMATAM YLQMEHVVDT CRKFIKASEA EMVPAMKPPR EDFLNSRMLM 151 200 ENSP00000384371/1-706 PQDIMAYRGR EVVENNLPLR SAPGCESRAF APSLYSGLST PPASYSMYSH ENSBTAP00000001978/1-706 PQDIMAYRGR EVVENSLPLR NAPGCESRAF APSLYNGLST PPASYPVYGH ENSTTRP00000016333/1-699 PQDLMAYRGR EVVENSLPLR NAPGCESRAF APSLYNGLST PPASYPMYGH bmy_04466T0/1-661 PQDIMAYRGR EVVENSLPLR NAPGCESRAF APSLYNGLST PPASYPVYGH BACU016532/1-706 PQDLMAYRGR EVVENSLPLR GAPGCESRAF APSLYNGLST PPASYPVYGH 201 250 ENSP00000384371/1-706 LPVSSLLFSD EEFRDVRMPV ANPFPKERAL PCDSARPVPG EYSRPTLEVS ENSBTAP00000001978/1-706 LPVSSFLFSD EELRDARMPI ANPFPKDRAL PCDSARPVPS EYSRPAMEIS ENSTTRP00000016333/1-699 LPVSSF-FSD EELRAM---V DNSSER---L PCDSARPVPS EYSRPAMELS bmy_04466T0/1-661 LPVSSFLFSD EELRDARMPV ANPFPKERTL PCDSARPVPS EYSRPAMELS BACU016532/1-706 LPVSSFLFSD EELRDARMPV ANPFPKERTL PCDSARPVPS EYSRPAMELS 251 300 ENSP00000384371/1-706 PNVCHSNIYS PKETIPEEAR SDMHYSVAEG LKPAAPSARN APYFPCDKAS ENSBTAP00000001978/1-706 PSVCHSTIYS PKEAAPEEAR SDMHYSVAEG PKPAAPSARS APYFPCDKAG ENSTTRP00000016333/1-699 PTVGHNNVYS PKEAALEEAR SDMHYSVAEG PKPAAPSARS APYFACDKAG bmy_04466T0/1-661 PTVGHNNVYS PKEAALEEAR SDMHYSVAEG PKPAAPSARS APYFACDKAG BACU016532/1-706 PTVGHNNVYS PKEAALEEAR SDMHYSVAEG PKPAAPSARS APYFACDKAG 301 350 ENSP00000384371/1-706 KEEERPSSED EIALHFEPPN APLNRKGLVS PQSPQKSDCQ PNSPTESCSS ENSBTAP00000001978/1-706 KEEERPSSED EIALHFEPPN APLNRKGLVS PQSPQKSDCQ PNSPTESCSS ENSTTRP00000016333/1-699 KEEERPSSED EIALHFEPPN APLNRKGLVS PQSPQKSDCQ PNSPTESCSS bmy_04466T0/1-661 KEEERPSSED EIALHFEPPN APLNRKGLVS PQSPQKSDCQ PNSPTESCSS BACU016532/1-706 KEEERPSSED EIALHFEPPN APLNRKGLVS PQSPQKSDCQ PNSPTESCSS 351 400 ENSP00000384371/1-706 KNACILQASG SPPAKSPTDP KACNWKKYKF IVLNSLNQNA KPEGPEQAEL ENSBTAP00000001978/1-706 KNACILQTSG SPPAKSPTDP KACNWKKYKF IVLNSLNQNA KPEGPEQAEL ENSTTRP00000016333/1-699 KNACILQTSG SPPAKSPTDP KACNWKKYKF IVLNSLNQNA KPEGPEQAEL bmy_04466T0/1-661 KNACILQTSG SPPAKSPTDP KACNWKKYKF IVLNSLNQNA KPEGPEQAEL BACU016532/1-706 KNACILQTSG SPPAKSPTDP KACNWKKYKF IVLNSLNQNA KPEGPEQAEL 401 450 ENSP00000384371/1-706 GRLSPRAYTA PPACQPPMEP ENLDLQSPTK LSASGEDSTI PQASRLNNIV ENSBTAP00000001978/1-706 GRLSPRAYAA PPACQPPMEP DSLDLQSPTK LSTSAEDSTI PQASRLNNIV ENSTTRP00000016333/1-699 GRLSPRAYTA PAACQPPMEP ETLDLQSPTK LSTSGEDSTI PQASRLNNIV bmy_04466T0/1-661 GRLSPRAYTA PPACQPPMEP ETLDLQSPTK LSTNGEDSTI PQASRLNNIV BACU016532/1-706 GRLSPRAYTA PPACQPPMEP ETLDLQSPTK LSTNGEDSTI PQASRLNNIV 451 500 ENSP00000384371/1-706 NRSMTGSPRS SSESHSPLYM HPPKCTSCGS QSPQHAEMCL HTAGPTFPEE ENSBTAP00000001978/1-706 NRSLTGSPRS SSESHSPLYL HPPKCTSCGS QSPQHAEMCL HAAGPTFPEE ENSTTRP00000016333/1-699 NRSLTGSPRS SSESHSPLYL HAPKCTSCGS QSPQHAEMCL HATGPTFPEE bmy_04466T0/1-661 NRSLTGSPRS SSESHSPLYL HAPKCTSCGS QSPQHAEMCL HATGPTFPEE BACU016532/1-706 NRSLTGSPRS SSESHSPLYL HAPKCTSCGS QSPQHAEMCL HATGPTFPEE 501 550 ENSP00000384371/1-706 MGETQSEYSD SSCENGAFFC NECDCRFSEE ASLKRHTLQT HSDKPYKCDR ENSBTAP00000001978/1-706 LGETQSEYSD SSCENGAFFC NECDCRFSEE ASLKRHTLQT HSDKPYKCDR ENSTTRP00000016333/1-699 LGETQSEYSD SSCENGAFFC NECDCRFSEE ASLKRHTLQT HSDKPYKCDR bmy_04466T0/1-661 LGETQSEYSD SSCENGAFFC NECDCRFSEE ASLKRHMMQT HSDKPYKCDR BACU016532/1-706 LGETQSEYSD SSCENGAFFC NECDCRFSEE ASLKRHMLQT HSDKPYKCDR 551 600 ENSP00000384371/1-706 CQASFRYKGN LASHKTVHTG EKPYRCNICG AQFNRPANLK THTRIHSGEK ENSBTAP00000001978/1-706 CQASFRYKGN LASHKTVHTG EKPYRCNICG AQFNRPANLK THTRIHSGEK ENSTTRP00000016333/1-699 CQASFRYKGN LASHKTVHTG EKPYRCNICG AQFNRPANLK THTRIHSGEK bmy_04466T0/1-661 CQASFRYKGN LASHKTVHTG EKPYRCNICG AQFNRPANLK THTRIHSGEK BACU016532/1-706 CQASFRYKGN LASHKTVHTG EKPYRCNICG AQFNRPANLK THTRIHSGEK 601 650 ENSP00000384371/1-706 PYKCETCGAR FVQVAHLRAH VLIHTGEKPY PCEICGTRFR HLQTLKSHLR ENSBTAP00000001978/1-706 PYKCETCGAR FVQVAHLRAH VLIHTGEKPY PCEICGTRFR HLQTLKSHLR ENSTTRP00000016333/1-699 PYKCETCGAR FVQVAHLRAH VLIHTGEKPY PCEICGTRFR HLQTLKSHLR bmy_04466T0/1-661 PYKCETCGAR FVQVAHLRAH VLIHTGEKPY PCEICGTRFR HLQTLKSHLR BACU016532/1-706 PYKCETCGAR FVQVAHLRAH VLIHTGEKPY PCEICGTRFR HLQTLKSHLR 651 700 ENSP00000384371/1-706 IHTGEKPYHC EKCNLHFRHK SQLRLHLRQK HGAITNTKVQ YRVSATDLPP ENSBTAP00000001978/1-706 IHTGEKPYHC EKCNLHFRHK SQLRLHLRQK HGAITNTKVQ YRVSATDLPP ENSTTRP00000016333/1-699 IHTGEKPYHC EKCNLHFRHK SQLRLHLRQK HGAITNTKVQ YRVSATDLPP bmy_04466T0/1-661 IHTGEKPYHV R--------- ---------- ---------- ---------- BACU016532/1-706 IHTGEKPYHC EKCNLHFRHK SQLRLHLRQK HGAITNTKVQ YRVSATDLPP 701 750 ENSP00000384371/1-706 ELPKAC ENSBTAP00000001978/1-706 ELPKAC ENSTTRP00000016333/1-699 ELPKAC bmy_04466T0/1-661 ------ BACU016532/1-706 ELPKAC