KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:05 2014 Check: 00 .. Name: ENSBTAP00000001981/1-678 Len: 681 Check: 8727 Weight: 1.00 Name: ENSP00000216923/1-681 Len: 681 Check: 9284 Weight: 1.00 Name: ENSTTRP00000008544/1-681 Len: 681 Check: 1756 Weight: 1.00 Name: bmy_00259T0/1-591 Len: 681 Check: 1104 Weight: 1.00 Name: BACU011318/1-679 Len: 681 Check: 9483 Weight: 1.00 // 1 50 ENSBTAP00000001981/1-678 MNASNEGESF PGSVQ--SGT TVLVELTPDI HICGICKQQF NNLDAFVAHK ENSP00000216923/1-681 MNASSEGESF AGSVQIPGGT TVLVELTPDI HICGICKQQF NNLDAFVAHK ENSTTRP00000008544/1-681 MNASSEGESF PGSVQIPGGT TVLVELTPDI HICGICKQQF NNLDAFVAHK bmy_00259T0/1-591 MRTWAHGQA- ---------- ---------- ---------- ---------- BACU011318/1-679 MNASSEGDSF PGSVQ--SGT TVLVELTPDI HICGICKQQF NNLDAFVAHK 51 100 ENSBTAP00000001981/1-678 QSGCQLTGTS GAAPSTVQFV SEETVPATQT QTTTRTITSE TQTITVSAPE ENSP00000216923/1-681 QSGCQLTGTS AAAPSTVQFV SEETVPATQT QTTTRTITSE TQTITVSAPE ENSTTRP00000008544/1-681 QSGCQLTGTS GAAPSTVQFV SEETVPATQT QTTTRTITSE TQTITVSAPE bmy_00259T0/1-591 ---------- ---------- --RESPGGKN KTKGRL---- --RIQVSAPE BACU011318/1-679 QSGCQLTGTS GAAPSTVQFV SEETVPATQT QTTTRTITSE TQTITVSAPE 101 150 ENSBTAP00000001981/1-678 FVFEHGYQTY LPTESNQNQT ATVISLPAKS RAKKPTAPPA QKRLNCCYPG ENSP00000216923/1-681 FVFEHGYQTY LPTESNENQT ATVISLPAKS RTKKPTTPPA QKRLNCCYPG ENSTTRP00000008544/1-681 FVFEHGYQTY LPTESNENQT ATVISLPAKS RAKKPTAPTA QKRLNCCYPX bmy_00259T0/1-591 FVFEHGYQTY LPTESNENQT ATVISLPAKS RAKKPTAPTA QKRLNCCYP- BACU011318/1-679 FVFEHGYQTY LPTESNENQT ATVISLPAKS RAKKPTAPTA QKRLNCCYPG 151 200 ENSBTAP00000001981/1-678 CQFKTAYGMK DMERHLKIHT GDKPHKCEVC GKCFSRKDKL KTHTRCHTGV ENSP00000216923/1-681 CQFKTAYGMK DMERHLKIHT GDKPHKCEVC GKCFSRKDKL KTHMRCHTGV ENSTTRP00000008544/1-681 XXXXXXXXXX XXXXXXXXXX XDKPHKCEVC SKCFSRKDKL KTHMRCHTGV bmy_00259T0/1-591 ---------- ---------- GDKPHKCEVC SKCFSRKDKL KTHMRCHTGV BACU011318/1-679 CQFKTAYGMK DMERHLKIHT GDKPHKCEVC SKCFSRKDKL KTHMRCHTGV 201 250 ENSBTAP00000001981/1-678 KPYKCKSCDY AAADSSSLNK HLRIHSDERP FKCQLCPYAS RNSSQLTVHL ENSP00000216923/1-681 KPYKCKTCDY AAADSSSLNK HLRIHSDERP FKCQICPYAS RNSSQLTVHL ENSTTRP00000008544/1-681 KPYKCKTCDY AAADSSSLNK HLRIHSDERP FKCQICPYAS RNSSQLTVHL bmy_00259T0/1-591 KPYKCKTCDY AAADSSSLNK HLRIHSDERP FKCQICPYAS RNSSQLTVHL BACU011318/1-679 KPYKCKTCDY AAADSSSLNK HLRIHSDERP FKCQICPYAS RNSSQLTVHL 251 300 ENSBTAP00000001981/1-678 RSHTGDAPFQ CWLCSAKFKI SSDLKRHMRV HSGEKPFKCE FCSVRCTMKG ENSP00000216923/1-681 RSHTGDAPFQ CWLCSAKFKI SSDLKRHMRV HSGEKPFKCE FCNVRCTMKG ENSTTRP00000008544/1-681 RSHTGDAPFQ CWLCSAKFKI SSDLKRHMRV HSGEKPFKCE FCNVRCTMKG bmy_00259T0/1-591 RSHTGDAPFQ CWLCSAKFKI SSDLKRHMRV HSGEKPFKCE FCNVRCTMKG BACU011318/1-679 RSHTGDAPFQ CWLCSAKFKI SSDLKRHMRV HSGEKPFKCE FCNVRCTMKG 301 350 ENSBTAP00000001981/1-678 NLKSHIRIKH SGNSFKCPHC DFLGDSKATL RKHSRLHQAE HPEKCPDCSY ENSP00000216923/1-681 NLKSHIRIKH SGNNFKCPHC DFLGDSKATL RKHSRVHQSE HPEKCSECSY ENSTTRP00000008544/1-681 NLKSHIRIKH SGNNFKCPHC DFLGDSKATL RKHSRVHQSE HPEKCSECSY bmy_00259T0/1-591 NLKSHIRIKH SGNNFKCPHC DFLGDSKATL RKHSRVHQSE HPEKCPECSY BACU011318/1-679 NLKSHIRIKH SGNNFKCPHC DFLGDSKATL RKHSRVHQAD HPEKCPECSY 351 400 ENSBTAP00000001981/1-678 SCPSKAALRV HSRVHCPDRP FKCSHCSFDT KQPSNLAKHV KKFHGDALKS ENSP00000216923/1-681 SCSSKAALRI HERIHCTDRP FKCNYCSFDT KQPSNLSKHM KKFHGDMVKT ENSTTRP00000008544/1-681 SCSSKAALRI HERIHCTDRP FKCSYCSFDT KQPSNLSKHV KKFHGDVVKT bmy_00259T0/1-591 SCSSKAALRI HERIHCTDRP FKCNYCSFDT KQPSNLSKHV KKFHGDVVKT BACU011318/1-679 SCSSKAALRI HERIHCTDRP FKCNYCSFDT KQPSNLSKHV KKFHGDVVKT 401 450 ENSBTAP00000001981/1-678 EAAERRDVGR SSGRQAAKLD AKKTFHCDRC DASFMREDSL RSHKRQHSEY ENSP00000216923/1-681 EALERKDTGR QSSRQVAKLD AKKSFHCDIC DASFMREDSL RSHKRQHSEY ENSTTRP00000008544/1-681 EASERKDTGR QSSRQVAKLD AKKTFHCDRC DASFMREDSL RSHKRQHSEY bmy_00259T0/1-591 EASEKKDTGR QSSRQVAKLD AKKTFHCDRC DASFMREDSL RSHKRQHSEY BACU011318/1-679 EASERKDTGR QSSRQVAKLD AKKTFHCDRC DASFMREDSL RSHKRQHSEY 451 500 ENSBTAP00000001981/1-678 GDGKGADVTV LQFQVDAGKP PAAPLAVGHL QVPLPPTPAP QFSEGRVKII ENSP00000216923/1-681 SESKNSDVTV LQFQIDPSKQ PATPLTVGHL QVPLQPSQVP QFSEGRVKII ENSTTRP00000008544/1-681 NENKSSDVTV LQFQIDPSKQ PAAPLTVGHL QVPLQPSQVP PFSEGRVKII bmy_00259T0/1-591 SENKSSDVTV LQFQIDPSKQ PAAPLTVGHL QVPLQSSQVP QFSEGRVKII BACU011318/1-679 SENKSPDVTV LQFQIDPSKQ PAAPLTVGHL QVPLQPSQVP QFSEGRVKII 501 550 ENSBTAP00000001981/1-678 VGHQVPQAST IVQAAAAAVN IVQPTLVAPN PEELRGNSRL QILRQVNLIA ENSP00000216923/1-681 VGHQVPQANT IVQAAAAAVN IVPPALVAQN PEELPGNSRL QILRQVSLIA ENSTTRP00000008544/1-681 VGHQVPQANT IVQAAAAAVN IVQPALVAQN PEELPGNSRL QILRQVNLIA bmy_00259T0/1-591 VGHQVPQANT IVQAAAAAVN IVQPALVAQN PEELPGNSRL QILRQVNLIA BACU011318/1-679 VGHQVPQANT IVQAAAAAVN IVQPALVAQN PEELPGNSRL QILRQVNLIA 551 600 ENSBTAP00000001981/1-678 PPPPSGCSSE AAALPQPAVL LTTHDQTEGA TLHQTLIPTT PGGPQEGSGN ENSP00000216923/1-681 PPQSSRCPSE AGAMTQPAVL LTTHEQTDGA TLHQTLIPTA SGGPQEGSGN ENSTTRP00000008544/1-681 PPHSSGCPSE AAAMPQPAVL LTTHDQTDGG TLHQTLIPTA PGGPQEGSGN bmy_00259T0/1-591 PPHSSGCPSE AAAMPQPAVL LTTHDQTDGG TLHQTLIPTA PGGPQEGSGN BACU011318/1-679 PPHSSGCPSE AAAMPQPAVL LTTHDQTDGG TLHQTLIPTA PGGPQEGSGN 601 650 ENSBTAP00000001981/1-678 QTFITSSGIT CTDFEGLNAL IQEGAAEVTV VSDGGQSIAV ATTAPPIFS- ENSP00000216923/1-681 QTFITSSGIT CTDFEGLNAL IQEGTAEVTV VSDGGQNIAV ATTAPPVFSS ENSTTRP00000008544/1-681 QTFITSSGIT CTDFEGLNAL IQEGTAEVTV VSDGGQNIAV ATTAPPIFST bmy_00259T0/1-591 QTFITSSGIT CTDFEGLNAL IQEGTAEVTV VSDGGQNIAV ATTAPPIFST BACU011318/1-679 QTFITSSGIT CTDFEGLNAL IQEGTAEVTV VSDGGQNIAV ATTAPPIFST 651 700 ENSBTAP00000001981/1-678 TSQQELPKQT YSIIQGGAHP ALLCPADSIP D ENSP00000216923/1-681 SSQQELPKQT YSIIQGAAHP ALLCPADSIP D ENSTTRP00000008544/1-681 TSQQELPKQT YSIIQGGAHP ALLCPADSIP D bmy_00259T0/1-591 TSQQELPKQT YSIIQGGAHP ALLCPADSIP D BACU011318/1-679 TSQQELPKQT YSIIQGGAHP ALLCPADSIP D