KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:06 2014 Check: 00 .. Name: ENSP00000323424/1-353 Len: 354 Check: 3801 Weight: 1.00 Name: ENSBTAP00000001989/1-349 Len: 354 Check: 5399 Weight: 1.00 Name: ENSTTRP00000013756/1-344 Len: 354 Check: 358 Weight: 1.00 Name: bmy_22723T0/1-244 Len: 354 Check: 1117 Weight: 1.00 Name: BACU003929/1-348 Len: 354 Check: 3149 Weight: 1.00 // 1 50 ENSP00000323424/1-353 MSTLLLNLDF GEPPPKKALE GNAKHRNFVK KRRLLERRGF LSKKNQPPSK ENSBTAP00000001989/1-349 MSTLLLNLDF GEPPPKKALE GNAKHRKFVK KRRLLERKGF LNKKKQPPSK ENSTTRP00000013756/1-344 MSTLLLNLDF GEPPPRRALE GNAKHQKFVK KRRLLERKGF LNKKQQPPSK bmy_22723T0/1-244 MSTLLLNLDF GEPPPRKALE GNAKHQKFVK KRRLLERKGF LNKKQQPPNK BACU003929/1-348 MSTLLLNLDF GEPPPRKALE GNAKHQKFVK KRRLLERKGF LNKKQQPPNK 51 100 ENSP00000323424/1-353 APKLHSEPSK KGETPTVDGT WKTPSFPKKK -TAASSNGSG QPLDKKAAVS ENSBTAP00000001989/1-349 VPKLHSEPSQ KGETPRVDGT WKATPLPKKK TTAASSSGSE QSLDKKAAVP ENSTTRP00000013756/1-344 VPKLRSEPSK KGDTPKVDGT WKAPPLPKKK -TAASSSGSE QSLDKKAAVP bmy_22723T0/1-244 VPKLHSEPSK KGDTRKVDGT WKXXPLPKKK -TAASSSGSE QSLGKKAAVP BACU003929/1-348 VPKLHSEPSK KGDTRKVDGT WKAPPLPKKK -TAASSSGSE QSLDKKAAVP 101 150 ENSP00000323424/1-353 WLTPAPSKKA DSVAAKVDLL GEFQSALPKI NSHPTRSQKK SSQKKSSKKN ENSBTAP00000001989/1-349 WLTPAPSQKA GSVVAKVDLL GEFQSALPKI KSHPTRPQKK GSQ-----KN ENSTTRP00000013756/1-344 WLTPAPSQKA GSVVAKVDLL GEFQSALPKI KSLPIRPQKK GSQ-----KN bmy_22723T0/1-244 WLTPAPSQKA GSVVAKVDLL GEFQSALPKI KSLSIRPQKK GSQ-----KN BACU003929/1-348 WLTPAPSQKA GSVVAKVDLL GEFQSALPKI KSLPIRPQKK GSQ-----KN 151 200 ENSP00000323424/1-353 HPQKNAPQNS TQAHSENKCS GASQKLPRKM VAIDCEMVGT GPKGHVSSLA ENSBTAP00000001989/1-349 PPPKNGPQNS THTHSENKYS GVSQKIPGKM VAIDCEMVGT GPKGHVSSLA ENSTTRP00000013756/1-344 PPQKTAPQIS TQAHSENKYP GASQKMPTKM VAIDCEMVGT GPKGHVSSLA bmy_22723T0/1-244 PPQKTAPQIS TQAHSENKYP GASQKMPTKM VAIDCEMVGT GPKGHVSSLA BACU003929/1-348 PPQKTAPQIS IQAHSENKYP GASQKMPTKM VAIDCEMVGT GPKGHVSSLA 201 250 ENSP00000323424/1-353 RCSIVNYNGD VLYDEYILPP CHIVDYRTRW SGIRKQHMVN ATPFKIARGQ ENSBTAP00000001989/1-349 RCSIVNYDGD VLYDEYILPP CHIVDYRTRW SGIRKQHMVN ATPFKIARNQ ENSTTRP00000013756/1-344 RCSIVSYSGD VLYDEYILPP CHIVDYRTRW SGIRKQHMVN ATPFKIARSQ bmy_22723T0/1-244 RCSIVSYSGD VLYDEYILPP CHIVDYRTRW SGIRKQHMVN ATPFKIARSQ BACU003929/1-348 RCSIVSYSGD VLYDEYILPP CHIVDYRTRW SGIRKQHMVN ATPFKIARSQ 251 300 ENSP00000323424/1-353 ILKILTGKIV VGHAIHNDFK ALQYFHPKSL TRDTSHIPPL NRKADCPENA ENSBTAP00000001989/1-349 ILKILAGKIV VGHAIHNDFK ALQYIHPKSL TRDTSHIPLL NRKADCPENA ENSTTRP00000013756/1-344 XXXXXXXXXX XXXXXXXXXX ALQFH--KSL TRDTSHNPPL T--ADCPENA bmy_22723T0/1-244 ---------- ---------- ---------- ---------- ---------- BACU003929/1-348 ILKIITGKIV VGHAIHNDFK ALQYFHPKSL TRDTSHIPLL NRKADCPENA 301 350 ENSP00000323424/1-353 TMSLKHLTKK LLNRDIQVGK SGHSSVEDAQ ATMELYKLVE VEWEEHLARN ENSBTAP00000001989/1-349 TMSLKSLTKK LLNRDIQAGK SGHSSVEDAQ ATMELYKLVE VEWEQHLAQN ENSTTRP00000013756/1-344 TVSLKHLTKK LLSRDIQVGK SGHSSVEDAQ ATMELYKLVE VEWEQHLAQN bmy_22723T0/1-244 ---------- ---------- ---------- ---------- ---------- BACU003929/1-348 TMSLKHLTKK LLSRDIQVGK SGHSSVEDAQ ATMELYKLVE VEWEQHLAKN 351 400 ENSP00000323424/1-353 PPTD ENSBTAP00000001989/1-349 PPKD ENSTTRP00000013756/1-344 PPKD bmy_22723T0/1-244 ---- BACU003929/1-348 PPKD