KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:07 2014 Check: 00 .. Name: ENSBTAP00000001995/1-541 Len: 543 Check: 5515 Weight: 1.00 Name: ENSP00000462468/1-543 Len: 543 Check: 2707 Weight: 1.00 Name: bmy_03984T0/1-306 Len: 543 Check: 2883 Weight: 1.00 Name: BACU014680/1-508 Len: 543 Check: 1240 Weight: 1.00 Name: ENSTTRP00000015806/1-541 Len: 543 Check: 7637 Weight: 1.00 // 1 50 ENSBTAP00000001995/1-541 MGCIKSKENK SPSIKYRPEN TPEPVSTGVG HYGGEHAVVA P--TSSTKST ENSP00000462468/1-543 MGCIKSKENK SPAIKYRPEN TPEPVSTSVS HYGAEPTTVS PCPSSSAKGT bmy_03984T0/1-306 MGCIKSKENK SPAIKYRPEN TPEPVSTSVS HYGAEHTAVA P--TSSTKST BACU014680/1-508 MGCIKSKENK SPAIKYRPEN TPEPVSTSVS HYGAEHTAVA P--TSSTKST ENSTTRP00000015806/1-541 MGCIKSKENK SPAVKYRPEN TPEPVSTSVS HYGAEHTAVA P--TSSTKST 51 100 ENSBTAP00000001995/1-541 SANFSSLSMT PFGGSSAVTP FGGASSSFSV VPSSYPAGLT GGVTIFVALY ENSP00000462468/1-543 AVNFSSLSMT PFGGSSGVTP FGGASSSFSV VPSSYPAGLT GGVTIFVALY bmy_03984T0/1-306 SVNFSTLSMT PFGGSSGVTP FGGASSSFSV VPSSYPAGLT GGVTVFVALY BACU014680/1-508 SVNFSNLSMT PFGGSSGVTP FGGTSSSFSV VPSSYPAGLT GGVTVFVALY ENSTTRP00000015806/1-541 SVNFSNLSMT PFGGSSGVTP FGGASSSFSV VPSSYPAGLT GGVTVSVALY 101 150 ENSBTAP00000001995/1-541 DYEARTTEDL SFKKGERFQI INNTEGDWWE ARSIATGKNG YIPSNYVAPA ENSP00000462468/1-543 DYEARTTEDL SFKKGERFQI INNTEGDWWE ARSIATGKNG YIPSNYVAPA bmy_03984T0/1-306 DYEARTTEDL SFKKGERFQI INNTEGDWWE ARSIATGKNG YIPSNYVAPA BACU014680/1-508 DYEARTTEDL SFKKGERFQI INNT------ ---------- ---------- ENSTTRP00000015806/1-541 DYEARTTEDL SFKKGERFQI INNTEGDWWE ARSIATGKNG YIPSNYVAPA 151 200 ENSBTAP00000001995/1-541 DSIQAEEWYF GKMGRKDAER LLLNPGNQRG IFLVRESETT KGAYSLSIRD ENSP00000462468/1-543 DSIQAEEWYF GKMGRKDAER LLLNPGNQRG IFLVRESETT KGAYSLSIRD bmy_03984T0/1-306 DSIQAEEWYF GKMGRKDAER LLLNPGNQRG A--------- ---YSLSIRD BACU014680/1-508 -------WYF GKMGRKDAER LLLNPGNQRG IFLVRESETT KGAYSLSIRD ENSTTRP00000015806/1-541 DSIQAEEWYF GKMGRKDAER LLLNPGNQRG IFLVRESETT KGAYSLSIRD 201 250 ENSBTAP00000001995/1-541 WDEVRGDNVK HYKIRKLDNG GYYITTRAQF DTLQKLVKHY TEHADGLCHK ENSP00000462468/1-543 WDEIRGDNVK HYKIRKLDNG GYYITTRAQF DTLQKLVKHY TEHADGLCHK bmy_03984T0/1-306 WDEVRGDNVK HYKIRKLDNG GYYITTRAQF DTLQKLVKHY TEHADGLCHK BACU014680/1-508 WDEVRGDNVK HYKIRKLDNG GYYITTRAQF DTLQKLVKHY TEHADGLCHK ENSTTRP00000015806/1-541 WDEVRGDNVK HYKIRKLDNG GYYITTRAQF DTLQKLVKHY TEHADGLCHK 251 300 ENSBTAP00000001995/1-541 LTTVCPTVKP QTQGLAKDAW EIPRESLRLE VKLGQGCFGE VWMGTWNGTT ENSP00000462468/1-543 LTTVCPTVKP QTQGLAKDAW EIPRESLRLE VKLGQGCFGE VWMGTWNGTT bmy_03984T0/1-306 LTTVCPTVKP QTQGLAKDAW EIPRESLRLE VKLGQGCFGE VWM------- BACU014680/1-508 LTTVCPTVKP QTQGLAKDAW EIPRESLRLE VKLGQGCFGE VWMGTWNGTT ENSTTRP00000015806/1-541 LTTVCPTVKP QTQGLAKDAW EIPRESLRLE VKLGQGCFGE VWMGTWNGTT 301 350 ENSBTAP00000001995/1-541 KVAIKTLKPG TMMPEAFLQE AQIMKKLRHD KLVPLYAVVS EEPIYIVTEF ENSP00000462468/1-543 KVAIKTLKPG TMMPEAFLQE AQIMKKLRHD KLVPLYAVVS EEPIYIVTEF bmy_03984T0/1-306 ---------- ---------- ---------- ---------- ---------- BACU014680/1-508 KVAIKTLKPG TMMPEAFLQE AQIMKKLRHD KLVPLYAVVS EEPIYIVTEF ENSTTRP00000015806/1-541 KVAIKTLKPG TMMPEAFLQE AQIMKKLRHD KLVPLYAVVS EEPIYIVTEF 351 400 ENSBTAP00000001995/1-541 MSKGSLLDFL KEGDGKYLKL PQLVDMAAQI ADGMAYIERM NYIHRDLRAA ENSP00000462468/1-543 MSKGSLLDFL KEGDGKYLKL PQLVDMAAQI ADGMAYIERM NYIHRDLRAA bmy_03984T0/1-306 ---GSLLDFL KEGDGKYLKL PQLVDMAAQV ---------- ---------- BACU014680/1-508 MSKGSLLDFL KEGDGKYLKL PQLVDMAAQI ADGMAYIERM NYIHRDLRAA ENSTTRP00000015806/1-541 MSKGSLLDFL KEGDGKYLKL PQLVDMAAQI ADGMAYIERM NYIHRDLRAA 401 450 ENSBTAP00000001995/1-541 NILVGENLVC KIADFGLARL IEDNEYTARQ GAKFPIKWTA PEAALYGRFT ENSP00000462468/1-543 NILVGENLVC KIADFGLARL IEDNEYTARQ GAKFPIKWTA PEAALYGRFT bmy_03984T0/1-306 ---------- ---------- ---------- ---------- ---------- BACU014680/1-508 NILVGENLVC KIADFGLARL IEDNEYTARQ GAKFPIKWTA PEAALYGRFT ENSTTRP00000015806/1-541 NILVGENLVC KIADFGLARL IEDNEYTARQ GAKFPIKWTA PEAALYGRFT 451 500 ENSBTAP00000001995/1-541 IKSDVWSFGI LQTELVTKGR VPYPGMVNRE VLEQVERGYR MPCPQGCPES ENSP00000462468/1-543 IKSDVWSFGI LQTELVTKGR VPYPGMVNRE VLEQVERGYR MPCPQGCPES bmy_03984T0/1-306 ---------- ---------- ---------- ---------- ---------- BACU014680/1-508 IKSDVWSFGI LQTELVTKGR VPYPGMVNRE VLEQVERGYR MPCPQGCPES ENSTTRP00000015806/1-541 IKSDVWSFGI LQTELVTKGR VPYPGMVNRE VLEQVERGYR MPCPQGCPES 501 550 ENSBTAP00000001995/1-541 LHELMNLCWK KDPDERPTFE YIQSFLEDYF TATEPQYQPG ENL ENSP00000462468/1-543 LHELMNLCWK KDPDERPTFE YIQSFLEDYF TATEPQYQPG ENL bmy_03984T0/1-306 ---------- ---------- ---------- ---------- --- BACU014680/1-508 LHELMNLCWK KDPDERPTFE YIQSFLEDYF TATEPQYQPG ENL ENSTTRP00000015806/1-541 LHELMNLCWK KDPDERPTFE YIQSFLEDYF TATEPQYQPG ENL