KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:10 2014 Check: 00 .. Name: bmy_13673T0/1-803 Len: 986 Check: 6292 Weight: 1.00 Name: ENSBTAP00000002010/1-903 Len: 986 Check: 7241 Weight: 1.00 Name: ENSP00000262903/1-909 Len: 986 Check: 4843 Weight: 1.00 Name: BACU014173/1-871 Len: 986 Check: 907 Weight: 1.00 Name: ENSTTRP00000012191/1-909 Len: 986 Check: 2746 Weight: 1.00 // 1 50 bmy_13673T0/1-803 MLRFFLKLGG GAAALRRAAP PVLCVPADKA GVCSPALPSQ PRIFTRSSRP ENSBTAP00000002010/1-903 -----MALAG NTQASHHL-- ---------- ---------- ---------- ENSP00000262903/1-909 MERAMEQLNR LTRSLRRAR- ---------- ---------- ---------- BACU014173/1-871 MERAMEQLNR LTRSLRRAR- ---------- ---------- ---------- ENSTTRP00000012191/1-909 MERAMEQLNR LTRSLRRAR- ---------- ---------- ---------- 51 100 bmy_13673T0/1-803 QGRRDPQEQL CLFEEGEAEK DQALWFSLNS SIILALVMSK KTKFLFSLSV ENSBTAP00000002010/1-903 ---------- ---------- ---------- ---------- ------PLDI ENSP00000262903/1-909 ---------- ---------- ---------- ---------- ------TVEL BACU014173/1-871 ---------- ---------- ---------- ---------- ------TVEL ENSTTRP00000012191/1-909 ---------- ---------- ---------- ---------- ------TVEL 101 150 bmy_13673T0/1-803 VLDNETAVYT LMPMVMADQH RSVSELLSNS KFDVNYAFGR VKRSLLHIAA ENSBTAP00000002010/1-903 LADNETAVYT LMPMVMADQH RSVSELLSNS KFDVNYAFGR VKRSLLHIAA ENSP00000262903/1-909 PEDNETAVYT LMPMVMADQH RSVSELLSNS KFDVNYAFGR VKRSLLHIAA BACU014173/1-871 PDDNETAVYT LMPMVMADQH RSVSELLSNS KFDVNYAFGR VKRSLLHIAA ENSTTRP00000012191/1-909 PDDNETAVYT LMPMVMADQH RSVSELLSNS KFDVNYAFGR VKRSLLHIAA 151 200 bmy_13673T0/1-803 NCGSVECLVL LLKKGANPNY QDISGCTPLH LAARNGQKKC MSKLLEYNAD ENSBTAP00000002010/1-903 NCGSVECLVL LLKKGANPNY QDISGCTPLH LAARNGQKKC MSKLLEYSAD ENSP00000262903/1-909 NCGSVECLVL LLKKGANPNY QDISGCTPLH LAARNGQKKC MSKLLEYSAD BACU014173/1-871 NCGSVECLVL LLKKGANPNY QDISGCTPLH LAARNGQKKC MSKLLEYSAD ENSTTRP00000012191/1-909 NCGSVECLVL LLKKGANPNY QDISGCTPLH LAARNGQKKC MSKLLEYNAD 201 250 bmy_13673T0/1-803 VNICNNEGLT AIHWLAVNGR TELLHDLVQH VSDVDVEDAM GQTALHVACQ ENSBTAP00000002010/1-903 VNICNNEGLT AIHWLAVNGR TELLHDLVQH VSDVDVEDAM GQTALHVACQ ENSP00000262903/1-909 VNICNNEGLT AIHWLAVNGR TELLHDLVQH VSDVDVEDAM GQTALHVACQ BACU014173/1-871 VNICNNEGLT AIHWLAVNGR TELLHDLVQH VSDVDVEDAM GQTALHVACQ ENSTTRP00000012191/1-909 VNICNNEGLT AIHWLAVNGR TELLHDLVQH VSDVDVEDAM GQTALHVACQ 251 300 bmy_13673T0/1-803 NGHKTTVQCL LDSGADINRP NVSGATPLYF ACSHGQRDTA QILLLRGAKY ENSBTAP00000002010/1-903 NGHKTTVQCL LDSGADINRP NVSGATPLYF ACSHGQRDTA QILLLRGAKY ENSP00000262903/1-909 NGHKTTVQCL LDSGADINRP NVSGATPLYF ACSHGQRDTA QILLLRGAKY BACU014173/1-871 NGHKTTVQCL LDSGADINRP NVSGATPLYF ACSHGQRDTA QILLLRGAKY ENSTTRP00000012191/1-909 NGHKTTVQCL LDSGADINRP NVSGATPLYF ACSHGQRDTA QILLLRGAKY 301 350 bmy_13673T0/1-803 LPDKNGVTPL DLCVQ----- ---------- ---------- ---------L ENSBTAP00000002010/1-903 LSDKNGVTPL DLCVQGGYGE TCEVLIQYHP RLFQTIIQMT QNEDLRENML ENSP00000262903/1-909 LPDKNGVTPL DLCVQGGYGE TCEVLIQYHP RLFQTIIQMT QNEDLRENML BACU014173/1-871 LPDKNGVTPL DLCVQGGYGE TCEVLIQYHP RLFQTIIQMT QNEDLRENML ENSTTRP00000012191/1-909 LPDKNGVSPL DLCVQGGYGE TCEVLIQYHP RLFQTIIQMT QNEDLRENML 351 400 bmy_13673T0/1-803 RQVLEHLSQQ SENQYLKILT SLAEVATTNG HKLLSISSNY DAQMKSLLRI ENSBTAP00000002010/1-903 RQVLEHLSQQ SESQYLKILT SLAEVATTNG HKLLSISSNY DAQMKSLLRI ENSP00000262903/1-909 RQVLEHLSQQ SESQYLKILT SLAEVATTNG HKLLSLSSNY DAQMKSLLRI BACU014173/1-871 RQVLEHLSQQ SENQYLKILT SLAEVATTNG HKLLSISSNY DAQMKSLLRI ENSTTRP00000012191/1-909 RQVLEHLSQQ SENQYLKILT SLAEVATTNG HKLLSISSNY DAQMKSLLRI 401 450 bmy_13673T0/1-803 VRIFCHVFRI GPSSPSNGID MGYNGNKTPR SQVFKLL-LL YKHIYEW--- ENSBTAP00000002010/1-903 VRIFCHVFRI GPSSPSNGID MGYNGNKTPR SQVFKPLELL WHSLDEWLVL ENSP00000262903/1-909 VRMFCHVFRI GPSSPSNGID MGYNGNKTPR SQVFKPLELL WHSLDEWLVL BACU014173/1-871 VRIFCHVFRI GPSSPSNGID MGYNGNKTPR SQVFKPLELL WHSLDEWLVL ENSTTRP00000012191/1-909 VRIFCHVFRI GPSSPSNGID MGYNGNKTPR SQVFKPLELL WHSLDEWLVL 451 500 bmy_13673T0/1-803 ---------- ---------- ---------- ---------- NPWKKVFQGS ENSBTAP00000002010/1-903 IATELMKNKK DSTDITSILL KQKGQDQDGT SIPPFEPPGP GSYENLSTGT ENSP00000262903/1-909 IATELMKNKR DSTEITSILL KQKGQDQDAA SIPPFEPPGP GSYENLSTGT BACU014173/1-871 IATELMKNKK DSTDITSILL KQKGQDQDGT SIPAFEPPGP GSYENLSTGT ENSTTRP00000012191/1-909 IATELMKNKK DSTDITSILL KQKGQDQDGT SIPAFEPPGP GSYENLSTGT 501 550 bmy_13673T0/1-803 ---------- ---------- -VTMSNYNFV K--------- -------MTS ENSBTAP00000002010/1-903 GESKPDVLGG KQEASADCQD VISMTANRLS AVIQAFYMCC SCQMPPGMTS ENSP00000262903/1-909 RESKPDALAG RQEASADCQD VISMTANRLS AVIQAFYMCC SCQMPPGMTS BACU014173/1-871 GESKPDALGG KQEASADCQD VISMTANRLS AVIQAFYMCC SCQMPPGMTS ENSTTRP00000012191/1-909 GESKPDALGG KQEASADCQD VISMTANRLS AVIQAFYMCC SCQMPPGMTS 551 600 bmy_13673T0/1-803 PRFIEFVCKH DEVLKCFVNR NPKIIFDHFH FLLECPELMS RFMHIIKAQP ENSBTAP00000002010/1-903 PRFIEFVCKH DEVLKCFVNR NPKIIFDHFH FLLECPELMS RFMHIIKAQP ENSP00000262903/1-909 PRFIEFVCKH DEVLKCFVNR NPKIIFDHFH FLLECPELMS RFMHIIKAQP BACU014173/1-871 PRFIEFVCKH DEVLKCFVNR NPKIIFDHFH FLLECPELMS RFMHIIKAQP ENSTTRP00000012191/1-909 PRFIEFVCKH DEVLKCFVNR NPKIIFDHFH FLLECPELMS RFMHIIKAQP 601 650 bmy_13673T0/1-803 FKDRCEWFYE HLHSGQPDSD MVHRPVNEND ILLVHRDSIF RSSCEVVSKA ENSBTAP00000002010/1-903 FKDRCEWFYE HLHSGQPDSD MVHRPVNEND ILLVHRDSIF RSSCEVVSKA ENSP00000262903/1-909 FKDRCEWFYE HLHSGQPDSD MVHRPVNEND ILLVHRDSIF RSSCEVVSKA BACU014173/1-871 FKDRCEWFYE HLHSGQPDSD MVHRPVNEND ILLVHRDSIF RSSCEVVSKA ENSTTRP00000012191/1-909 FKDRCEWFYE HLHSGQPDSD MVHRPVNEND ILLVHRDSIF RSSCEVVSKA 651 700 bmy_13673T0/1-803 NCAKLKQGIA VRFHGEEGMG QGVVR----- ---------- ---------T ENSBTAP00000002010/1-903 NCAKLKQGIA VRFHGEEGMG QGVVREWFDI LSNEIVNPDY ALFTQSADGT ENSP00000262903/1-909 NCAKLKQGIA VRFHGEEGMG QGVVREWFDI LSNEIVNPDY ALFTQSADGT BACU014173/1-871 NCAKLKQGIA VRFHGEEGMG QGVVREWFDI LSNEIVNPDY ALFTQSADGT ENSTTRP00000012191/1-909 NCAKLKQGIA VRFHGEEGMG QGVVREWFDI LSNEIVNPDY ALFTQSADGT 701 750 bmy_13673T0/1-803 TFQPNSNSYV NPDHLNYFRF AGQILGLALN HRQLVNIYFT RSFYKHILGI ENSBTAP00000002010/1-903 TFQPNSNSSV NPDHLNYFRF AGQILGLALN HRQLVNIYFT RSFYKHILGI ENSP00000262903/1-909 TFQPNSNSYV NPDHLNYFRF AGQILGLALN HRQLVNIYFT RSFYKHILGI BACU014173/1-871 TFQPNSNSYV NPDHLNYFRF AGQILGLALN HRQLVNIYFT RSFYKHILGI ENSTTRP00000012191/1-909 TFQPNSNSYV NPDHLNYFRF AGQILGLALN HRQLVNIYFT RSFYKHILGI 751 800 bmy_13673T0/1-803 PVNYQDVASI DPEYAKNLQW ILDNDISDLG LELTFSVETD VFGAMEEVPL ENSBTAP00000002010/1-903 PVNYQDVASI DPEYAKNLQW ILDNDISDLG LELTFSVETD VFGAMEEVPL ENSP00000262903/1-909 PVNYQDVASI DPEYAKNLQW ILDNDISDLG LELTFSVETD VFGAMEEVPL BACU014173/1-871 PVNYQDVASI DPEYAKNLQW ILDNDISDLG LELTFSVETD VFGAMEEVPL ENSTTRP00000012191/1-909 PVNYQDVASI DPEYAKNLQW ILDNDISDLG LELTFSVETD VFGAMEEVPL 801 850 bmy_13673T0/1-803 KPGGGSILVT QNNK------ ---------- ---------- ---------- ENSBTAP00000002010/1-903 KPGGGSILVT QNNKAEYVQL VTELRMTRAI QPQINAFLQG FHMFIPPSLI ENSP00000262903/1-909 KPGGGSILVT QNNKAEYVQL VTELRMTRAI QPQINAFLQG FHMFIPPSLI BACU014173/1-871 KPGGGSILVT QNNKAEYVQL VTELRMTRAI QPQINAFLQG FHMFIPPSLI ENSTTRP00000012191/1-909 KPGGGSILVT QNNKAEYVQL VTELRMTRAI QPQINAFLQG FHMFIPPSLI 851 900 bmy_13673T0/1-803 --------EL LLSGMPEIDV SDWIKNTEYT SGYEREDPVI QWFWEVVEDI ENSBTAP00000002010/1-903 QLFDEYELEL LLSGMPEIDV SDWIKNTEYT SGYEREDPVI QWFWEVVEDI ENSP00000262903/1-909 QLFDEYELEL LLSGMPEIDV SDWIKNTEYT SGYEREDPVI QWFWEVVEDI BACU014173/1-871 QLFDEYELEL LLSGMPEIDV SDWIKNTEYT SGYEREDPVI QWFWEVVEDI ENSTTRP00000012191/1-909 QLFDEYELEL LLSGMPEIDV SDWIKNTEYT SGYEREDPVI QWFWEVVEDI 901 950 bmy_13673T0/1-803 TPEERVLLLQ FVTGSSRVPH GGFANIMGGS GLQNFTIAAV PYTPNLLPTS ENSBTAP00000002010/1-903 TPEERVLLLQ FVTGSSRVPH GGFANIMGGS GLQNFTIAAV PYTPNLLPTS ENSP00000262903/1-909 TQEERVLLLQ FVTGSSRVPH GGFANIMGGS GLQNFTIAAV PYTPNLLPTS BACU014173/1-871 TPEERVLLLQ FVTGS----- ---------- ---------- ---------- ENSTTRP00000012191/1-909 TPEERVLLLQ FVTGSCRLPH GGFANIMGGS GLQNFTIAAV PYTPNLLPTS 951 1000 bmy_13673T0/1-803 STCINMLKLP EYPSKEILKD RLLVALHCGS YGYTMA ENSBTAP00000002010/1-903 STCINMLKLP EYPSKEILKD RLLVALHCGS YGYTMA ENSP00000262903/1-909 STCINMLKLP EYPSKEILKD RLLVALHCGS YGYTMA BACU014173/1-871 ---INMLKLP EYPSKEILKD RLLVALHCGS YGYTMA ENSTTRP00000012191/1-909 STCINMLKLP EYPSKEILKD RLLVALHCGS YGYTMA