KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:16:10 2014 Check: 00 .. Name: ENSBTAP00000002011/1-344 Len: 376 Check: 3089 Weight: 1.00 Name: ENSP00000434847/1-353 Len: 376 Check: 5846 Weight: 1.00 Name: bmy_01301T0/1-367 Len: 376 Check: 6871 Weight: 1.00 Name: BACU012503/1-353 Len: 376 Check: 7085 Weight: 1.00 // 1 50 ENSBTAP00000002011/1-344 ---------- ----MPWPLL PLLLLLLLAA SGAQTTRPCF PGCQCEVETF ENSP00000434847/1-353 ---------- ----MPWP-- ---LLLLLAV SGAQTTRPCF PGCQCEVETF bmy_01301T0/1-367 MEQPVETEPV SAHTMLWP-- ---LLLLLAA GEAQTTRPCF PGCQCEVETF BACU012503/1-353 ---------- ----MLWP-- ---LLLLLAS GEAQTTRPCL PGCQCEVETF 51 100 ENSBTAP00000002011/1-344 GLFDSFSLTR VGCSGLGPHI VPVPIPLDTA HLDLSSNRLE TVNESVLAGP ENSP00000434847/1-353 GLFDSFSLTR VDCSGLGPHI MPVPIPLDTA HLDLSSNRLE MVNESVLAGP bmy_01301T0/1-367 GLFDSFSLTR VDCSSLGPHI VPVPIPLDTA HLDLSSNRLE TVNESVLAGP BACU012503/1-353 GLFDSFSLTR VDCSGLGPHI VPVPIPLDTA HLDLSSNRLE MVNESVLAGP 101 150 ENSBTAP00000002011/1-344 GYTTLSGLDL SYNLLTSLSP TAFSRLRYLE SLDLSHNGLA ALPTGSFTSS ENSP00000434847/1-353 GYTTLAGLDL SHNLLTSISP TAFSRLRYLE SLDLSHNGLT ALPAESFTSS bmy_01301T0/1-367 GYTTLAGLDL SHNLLTSLSP TAFSRLRYLE SLDLSHNGLA ALPAESFTSS BACU012503/1-353 GYTTLTGLDL SHNLLTSLSP TAFSRLRYLE SLDLSHNGLA ALPAESFTSS 151 200 ENSBTAP00000002011/1-344 PLSDVNLSHN RLREVSVSAF ATHSQGRALH VDLSHNLLQR LLPHSSRAGQ ENSP00000434847/1-353 PLSDVNLSHN QLREVSVSAF TTHSQGRALH VDLSHNLIHR LVPHPTRAGL bmy_01301T0/1-367 PLSDVNLSHN RLREVSVSAF ATHSPARALH VDLSHNLLHR LVPHPARASL BACU012503/1-353 PLSDVNLSHN RLREVSVSAF ATHSPARALH VDLSHNLLHR LVPHPVRASL 201 250 ENSBTAP00000002011/1-344 PAPTIQSLNL AWNRLRAVPD LRGLPLRYLS LDGTRWQPSA PAPLRGWRAS ENSP00000434847/1-353 PAPTIQSLNL AWNRLHAVPN LRDLPLRYLS LDGNPLAVIG PGAFAGLGGL bmy_01301T0/1-367 PAPTIQSLNL AWNRLHTVPD LRDLPLRYLS LDGNPLAAIG PGAFEGLAGL BACU012503/1-353 PAPTIQSLNL AWNRLHTVPD LRDLPLRYLS LDGNPLVAIG PGAFEGLAGL 251 300 ENSBTAP00000002011/1-344 LICRWAACRV SPCWRPTAST SCRACRSWTC PATPGSNGQD LRCSQAWAPC ENSP00000434847/1-353 THLSLASLQR LPELAPSGFR ELPGLQVLDL SGNPKLNWAG AEVFSGLSSL bmy_01301T0/1-367 THLSLGSLQR LPQLAPYGFR ELQGLQVLDL SSNPKLKWAG PEVFSGLGSL BACU012503/1-353 THLSLGSLQR LPQLAPYGFR ELQGLQVLDL SSNPKLKWAG PEVFSGLGSL 301 350 ENSBTAP00000002011/1-344 RSWTCRAQAW CPCPRSCSST SPHCRASAWA RACSAGAWCG RAPTHGSLAS ENSP00000434847/1-353 QELDLSGTNL VPLPEALLLH LPALQSV--- -SVGQDVRCR RLVREGTYPR bmy_01301T0/1-367 QELDLSGTGL VPLPEKLLLH LPALQSI--- -SVGQGVQCR RLVREGTYPR BACU012503/1-353 QELDLSGTGL VPLPEKLLLH LPALQSV--- -SVGQGVQCR RLVREGTYPR 351 400 ENSBTAP00000002011/1-344 PP-------- ---------- RWPCTA ENSP00000434847/1-353 RPGSSPKVAL HCVDTRDSAA RGPTIL bmy_01301T0/1-367 QPGSTPKVAL HCIDTQELAA GGSDTL BACU012503/1-353 QPGSTPKVAL HCVDTQELAA GGSDAL