KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:16:11 2014 Check: 00 ..
Name: ENSTTRP00000009067/1-385 Len: 385 Check: 3659 Weight: 1.00
Name: ENSBTAP00000002017/1-384 Len: 385 Check: 9684 Weight: 1.00
Name: ENSP00000324729/1-383 Len: 385 Check: 8917 Weight: 1.00
Name: BACU015331/1-351 Len: 385 Check: 1896 Weight: 1.00
Name: bmy_06176T0/1-206 Len: 385 Check: 7513 Weight: 1.00
//
1 50
ENSTTRP00000009067/1-385 MLSRKKTKNE VSKPAEVQGK YVKKETSPLL RNLMPSFIRH GPTIPRRTDI
ENSBTAP00000002017/1-384 MLSRKKTKNE VSKPAEVQGK YVKKETSPLL RNLMPSFIRH GPTIPRRTDI
ENSP00000324729/1-383 MLSRKKTKNE VSKPAEVQGK YVKKETSPLL RNLMPSFIRH GPTIPRRTDI
BACU015331/1-351 ---------- ---------- ---------- ---MPSFIRH GPTIPRRTDI
bmy_06176T0/1-206 ---------- ---------- ---------- ---------- ----------
51 100
ENSTTRP00000009067/1-385 CLPDSSSNAF AASGDGIVSR NHSFLRTPIQ RTPHEIMRRE SNRLSAPSYL
ENSBTAP00000002017/1-384 CLPDSGANAF SASGDGIVSR NHSFLRTPIQ RTPHEMMRRE SNRLSAPSYL
ENSP00000324729/1-383 CLPDSSPNAF STSGD-VVSR NQSFLRTPIQ RTPHEIMRRE SNRLSAPSYL
BACU015331/1-351 CLPDSSSNAF AASGDGIVSR NHSFLRTPIQ RTPHEIMRRE SNRLSAPSYL
bmy_06176T0/1-206 ---------- ---------- ---------- ---------- ----------
101 150
ENSTTRP00000009067/1-385 ARSLADVPRE YGSSQSFLTE VNFAVENGDS GSRYYYSDNY FDGQRRRPLG
ENSBTAP00000002017/1-384 ARSLADVPRE YGSSQSFLTE VNFAPENGDS GSRYYYSDNY FDGQRRRPLG
ENSP00000324729/1-383 ARSLADVPRE YGSSQSFVTE VSFAVENGDS GSRYYYSDNF FDGQRKRPLG
BACU015331/1-351 ARSLADVPRE YGSSQSFLTE VNFAVENGDS GSRYYYSDNY FDGQRRRPLG
bmy_06176T0/1-206 ---------- ---------- ---------- ---------- ----------
151 200
ENSTTRP00000009067/1-385 DRAHEDYRYY EYNHDLFQRM PQNQGRHASG IGRVAATSLG NLTNHGSEDL
ENSBTAP00000002017/1-384 DRAHEDYRYY EYNHDLFQRM PQNQGRHASG IGRVAATSLG NLANHGSEDL
ENSP00000324729/1-383 DRAHEDYRYY EYNHDLFQRM PQNQGRHASG IGRVAATSLG NLTNHGSEDL
BACU015331/1-351 DRAHEDYRYY EYNHDLFQRM PQNQGRHASG IGRVAATSLG NLTNHGSEDL
bmy_06176T0/1-206 ---------- ---------- --------SG IGRVAATSLG NLTNHGSEDL
201 250
ENSTTRP00000009067/1-385 PLPPGWSVDW TMRGRKYYID HNTNTTHWSH PLEREGLPPG WERVESSEFG
ENSBTAP00000002017/1-384 PLPPGWSVDW TMRGRKYYID HNTNTTHWSH PLEREGLPPG WERVESSEFG
ENSP00000324729/1-383 PLPPGWSVDW TMRGRKYYID HNTNTTHWSH PLEREGLPPG WERVESSEFG
BACU015331/1-351 PLPPGWSVDW TMRGRKYYID HNTNTTHWSH PLEREGLPPG WERVESSEFG
bmy_06176T0/1-206 PLPPGWSVDW TMRGRKYYID HNTNTTHWSH PLEREGLPPG WERVESSEFG
251 300
ENSTTRP00000009067/1-385 TYYVDHTNKK AQYRHPCAPS VPRYDLXXXX XXXXXXXXXX XXXXXXXXXX
ENSBTAP00000002017/1-384 TYYVDHTNKK AQYRHPCAPS VPRYDQPPPV TYQPQQTERN QPLLVPANPY
ENSP00000324729/1-383 TYYVDHTNKK AQYRHPCAPS VPRYDQPPPV TYQPQQTERN QSLLVPANPY
BACU015331/1-351 TYYVDHTNKK AQYRHPCAPS VPRYDQPPPV TYQPQQTERN QSLLVPANPY
bmy_06176T0/1-206 TYYVDHTNKK AQYRHPCAPS VPRYDQPPPV TYQPQQTERN QSLLVPANPY
301 350
ENSTTRP00000009067/1-385 XXXXXXXXXX XXXXXXXXXY DHILKWELFQ LADLDTYQGM LKLLFMKELE
ENSBTAP00000002017/1-384 HTAEIPDWLQ VYARAPVK-Y DHILKWELFQ LADLDTYQGM LKLLFMKELE
ENSP00000324729/1-383 HTAEIPDWLQ VYARAPVK-Y DHILKWELFQ LADLDTYQGM LKLLFMKELE
BACU015331/1-351 HTAEIPDWLQ VYARAPVK-Y DHILKWELFQ LADLDTYQGM LKLLFMKELE
bmy_06176T0/1-206 HTAEIPDWLQ VYARAPVK-Y DHILKWELFQ LADLDTYQGM LKLLFMKELE
351 400
ENSTTRP00000009067/1-385 QIVKMYEAYR QALLTELENR KQRQQWYAQQ HGKNF
ENSBTAP00000002017/1-384 QIVKMYEAYR QALLTELENR KQRQQWYAQQ HGKNF
ENSP00000324729/1-383 QIVKMYEAYR QALLTELENR KQRQQWYAQQ HGKNF
BACU015331/1-351 QIVKMYEAYR QALLTELENR KQRQQWYAQQ HGKNF
bmy_06176T0/1-206 QIVKMYEAYR QALLTELENR KQRQQWYAQQ HGKNF