KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:11 2014 Check: 00 .. Name: ENSP00000340761/1-251 Len: 251 Check: 4751 Weight: 1.00 Name: ENSBTAP00000002020/1-242 Len: 251 Check: 3597 Weight: 1.00 Name: ENSTTRP00000001558/1-203 Len: 251 Check: 8215 Weight: 1.00 Name: BACU013670/1-182 Len: 251 Check: 1332 Weight: 1.00 Name: bmy_18865T0/1-182 Len: 251 Check: 2184 Weight: 1.00 // 1 50 ENSP00000340761/1-251 MGARASGGPL ARAGLLLLLL LLLLLGLLAP GAQGARGRGG AEKNSYRRTV ENSBTAP00000002020/1-242 MGARASGGPR ARTG---FLL LLLLLGLVAP GAQGARSRGG TEKNSYRRTV ENSTTRP00000001558/1-203 ---------- ---------- ---------- ---------- -EKNKYRRTI BACU013670/1-182 ---------- ---------- ---------- ---------- ---------- bmy_18865T0/1-182 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000340761/1-251 NTFSQSVSSL FGEDNVRAAQ KFLARLTERF VLGVDMFVET LWKVWTELLD ENSBTAP00000002020/1-242 NTFSQSVSSL FGEDNVRAAQ KFLTRLTERF VLGVDMFVET VWKVWAELLE ENSTTRP00000001558/1-203 NTF-QSVSNL FGEDNVRAAQ KFLTRLTERF VLGVDMFVET LWKVWAELLD BACU013670/1-182 -----MISLL F--------L QFLTRLTERF VLGVDMFVET LWKVWAELLD bmy_18865T0/1-182 -----MISLS F--------L QFLTRLTERF VLGVDMFVET LWKVWAELLD 101 150 ENSP00000340761/1-251 VLGLDVSNLS QYFSPASVSS SPARALLLVG VVLLAYWFLS LTLGFTFSVL ENSBTAP00000002020/1-242 VLGLDVSNLS QYFNPSSVAS SPARALLLVG VVLLAYWFLS LTLGFTFSAL ENSTTRP00000001558/1-203 VLGLDVSNLS QYFNPSSVAN SPTRALLLVG VVLLAYWFLS LTLGFTFSVL BACU013670/1-182 VLGLDVSNLS QYFNPSSVAN SPTRALLLVG VVLLAYWFLS LTLGFTFSVL bmy_18865T0/1-182 VLGLDVSNLS QYFNPSSVAN SPTRALLLVG VVLLAYWFLS LTLGFTFSVL 151 200 ENSP00000340761/1-251 HVVFGRFFWI VRVVLFSMSC VYILHKYEGE PENAVLPLCF VVAVYFMTGP ENSBTAP00000002020/1-242 HVVFGRFFWV VRVILFSMSC VYILHKYEGE PENAVLPLCF VVAIYFMTGP ENSTTRP00000001558/1-203 HVVFGRFFWV VRVILFSMSC VYILHKYEGE PENAVLPLCF VVAIYFMTGP BACU013670/1-182 HVVFGRFFWA VRVILFSMSC VYILHKYEGE PENAVLPLCF VVAVYFMAGP bmy_18865T0/1-182 HVVFGRFFWV VRVILFSMSC VYILHKYEGE PENAVLPLCF VVAIYFMTGP 201 250 ENSP00000340761/1-251 MGFYWRSSPS GPSNPSNPSV EEKLEHLEKQ VRLLNIRLNR VLESLDRSKD ENSBTAP00000002020/1-242 MGFYWRGGPS G------PSV EEKLEQLENQ VRLLNIRLTR VLESLDRPNS ENSTTRP00000001558/1-203 MGFYWRSSPS G------PSV EEKLEQLENQ VRLLNIRLNR VLESLDRSNG BACU013670/1-182 MGFYWRSSPS G------PSV EEKLEQLESQ VRLLNIRLNR VLESLDRSNG bmy_18865T0/1-182 MGFYWRSSPS G------PSV EEKLEQLENQ VRLLNIRLNR VLESLDRSNG 251 300 ENSP00000340761/1-251 K ENSBTAP00000002020/1-242 K ENSTTRP00000001558/1-203 K BACU013670/1-182 K bmy_18865T0/1-182 K