KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:12 2014 Check: 00 .. Name: ENSBTAP00000002028/1-612 Len: 657 Check: 8787 Weight: 1.00 Name: ENSP00000357292/1-601 Len: 657 Check: 9563 Weight: 1.00 Name: bmy_03401T0/1-634 Len: 657 Check: 938 Weight: 1.00 Name: BACU003950/1-601 Len: 657 Check: 1148 Weight: 1.00 Name: ENSTTRP00000012658/1-601 Len: 657 Check: 2060 Weight: 1.00 // 1 50 ENSBTAP00000002028/1-612 ---------- ---------- ---------- ---------- -----RAGGR ENSP00000357292/1-601 ---------- ---------- ---------- ---------- ---------- bmy_03401T0/1-634 RPGRCGCGWS GGGGEALGRG GERGVLEAPE PSPDGRAGGE KEEPGRAGGR BACU003950/1-601 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012658/1-601 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000002028/1-612 PGGGGGMAEP SGAETRPPIR VTVKTPKDKE EIVICDRASV KEFKEEISRR ENSP00000357292/1-601 ------MAEP SGAETRPPIR VTVKTPKDKE EIVICDRASV KEFKEEISRR bmy_03401T0/1-634 PGGGGGMAEP SGAETRPPIR VTVKTPKDKE EIVICDRASV KEFKEEISRR BACU003950/1-601 ------MAEP SGAETRPPIR VTVKTPKDKE EIVICDRASV KEFKEEISRR ENSTTRP00000012658/1-601 ------MAEP SGAETRPPIR VTVKTPKDKE EIVICDRASV KEFKEEISRR 101 150 ENSBTAP00000002028/1-612 FKAQQDQLVL IFAGKILKDG DTLNQHGIKD GLTVHLVIKT PQKVQDPATA ENSP00000357292/1-601 FKAQQDQLVL IFAGKILKDG DTLNQHGIKD GLTVHLVIKT PQKAQDPAAA bmy_03401T0/1-634 FKAQQDQLVL IFAGKILKDG DTLNQHGIKD GLTVHLVIKT PQKVQDPATA BACU003950/1-601 FKAQQDQLVL IFAGKILKDG DTLNQHGIKD GLTVHLVIKT PQKVQDPATA ENSTTRP00000012658/1-601 FKAQQDQLVL IFAGKILKDG DTLNQHGIKD GLTVHLVIKT PQKVQDPATA 151 200 ENSBTAP00000002028/1-612 TASSPSTPDP ASAPSTTPAS PATSAQPSTS GSATSDTGSG SRRGSGGGTS ENSP00000357292/1-601 TASSPSTPDP ASAPSTTPAS PATPAQPSTS GSASSDAGSG SRRSSGGGPS bmy_03401T0/1-634 TASSPSTPDP ASAPSTTPAS PATSAQPSTS GSATSDTGSG SRRSSGGGTS BACU003950/1-601 TASSPSTPDP ASAPSTTPAS PATSAQPSTS GSATSDTGSG SRRSSGGGTS ENSTTRP00000012658/1-601 TASSPSTPDP ASAPSTTPAS PATSAQPSTS GSATSDTGSG SRRSSGGGTS 201 250 ENSBTAP00000002028/1-612 PGTGEGPPSA TASILSGFGG ILGLGSLGLG SANFMELQQQ MQRQLMSNPE ENSP00000357292/1-601 PGAGEGSPSA TASILSGFGG ILGLGSLGLG SANFMELQQQ MQRQLMSNPE bmy_03401T0/1-634 PGTGEGPPSA TASILSGFGG ILGLGSLGLG SANFMELQQQ MQRQLMSNPE BACU003950/1-601 PGTGEGPPSA TASILSGFGG ILGLGSLGLG SANFMELQQQ MQRQLMSNPE ENSTTRP00000012658/1-601 PGTGEGPPSA TASILSGFGG ILGLGSLGLG SANFMELQQQ MQRQLMSNPE 251 300 ENSBTAP00000002028/1-612 MLSQIMENPL VQDMMSNPDL MRHMIMANPQ MQQLMERNPE ISHMLNNPEL ENSP00000357292/1-601 MLSQIMENPL VQDMMSNPDL MRHMIMANPQ MQQLMERNPE ISHMLNNPEL bmy_03401T0/1-634 MLSQIMENPL VQDMMSNPDL MRHMIMANPQ MQQLMERNPE ISHMLNNPEL BACU003950/1-601 MLSQIMENPL VQDMMSNPDL MRHMIMANPQ MQQLMERNPE ISHMLNNPEL ENSTTRP00000012658/1-601 MLSQIMENPL VQDMMSNPDL MRHMIMANPQ MQQLMERNPE ISHMLNNPEL 301 350 ENSBTAP00000002028/1-612 MRQTMELARN PAMMQEMMRN QDRALSNLES IPGGYNALRR MYTDIQEPMF ENSP00000357292/1-601 MRQTMELARN PAMMQEMMRN QDRALSNLES IPGGYNALRR MYTDIQEPMF bmy_03401T0/1-634 MRQTMELARN PAMMQEMMRN QDRALSNLES IPGGYNALRR MYTDIQEPMF BACU003950/1-601 MRQTMELARN PAMMQEMMRN QDRALSNLES IPGGYNALRR MYTDIQEPMF ENSTTRP00000012658/1-601 MRQTMELARN PAMMQEMMRN QDRALSNLES IPGGYNALRR MYTDIQEPMF 351 400 ENSBTAP00000002028/1-612 SAAREQFGNN PFSSLAGNSD SSSSQPLRTE NREPLPNPWS PSPPASQAPG ENSP00000357292/1-601 SAAREQFGNN PFSSLAGNSD SSSSQPLRTE NREPLPNPWS PSPPTSQAPG bmy_03401T0/1-634 SAAREQFGNN PFSSLAGNSD SSSSQPLRTE NREPLPNPWS PSPPTSQAPG BACU003950/1-601 SAAREQFGNN PFSSLAGNSD SSSSQPLRTE NREPLPNPWS PSPPTSQAPG ENSTTRP00000012658/1-601 SAAREQFGNN PFSSLAGNSD SSSSQPLRTE NREPLPNPWS PSPPTSQAPG 401 450 ENSBTAP00000002028/1-612 SGGEGAGGSG ASRVHPTVSN PFGINAASLG SGMFNSPEMQ ALLQQISENP ENSP00000357292/1-601 SGGEGTGGSG TSQVHPTVSN PFGINAASLG SGMFNSPEMQ ALLQQISENP bmy_03401T0/1-634 SGGEGTGGSG TSQVHPTVSN PFGINAASLG SGMFNSPEMQ ALLQQISENP BACU003950/1-601 SGGEGTGGSG TSQVHPTVSN PFGINAASLG SGMFNSPEMQ ALLQQISENP ENSTTRP00000012658/1-601 SGGEGTGGSG TSQVHPTVSN PFGINAASLG SGMFNSPEMQ ALLQQISENP 451 500 ENSBTAP00000002028/1-612 QLMQNVISAP YMRSMMQTLA QNPDFAAQMM VNVPLFAGNP QLQEQLRLQL ENSP00000357292/1-601 QLMQNVISAP YMRSMMQTLA QNPDFAAQMM VNVPLFAGNP QLQEQLRLQL bmy_03401T0/1-634 QLMQN----- ---------- --------MM VNVPLFAGNP QLQEQLRLQL BACU003950/1-601 QLMQNVISAP YMRSMMQTLA QNPDFAAQMM VNVPLFAGNP QLQEQLRLQL ENSTTRP00000012658/1-601 QLMQNVISAP YMRSMMQTLA QNPDFAAQMM VNVPLFAGNP QLQEQLRLQL 501 550 ENSBTAP00000002028/1-612 PVFLQQMQNP ESLSILTNPR AMQALLQIQQ GLQTLQTEAP GLVPSLGSFG ENSP00000357292/1-601 PVFLQQMQNP ESLSILTNPR AMQALLQIQQ GLQTLQTEAP GLVPSLGSFG bmy_03401T0/1-634 PVFLQQMQNP ESLSILTNPR AMQALLQIQQ GLQTLQTEAP GLVPSLGSFG BACU003950/1-601 PVFLQQMQNP ESLSILTNPR AMQALLQIQQ GLQTLQTEAP GLVPSLGSFG ENSTTRP00000012658/1-601 PVFLQQMQNP ESLSILTNPR AMQALLQIQQ GLQTLQTEAP GLVPSLGSFG 551 600 ENSBTAP00000002028/1-612 MARPPASSAG SNAGSAPEAP TSSPALPVTS SPAGASSAQQ QLMQQMIQLL ENSP00000357292/1-601 ISRTPAPSAG SNAGSTPEAP TSSPATPATS SPTGASSAQQ QLMQQMIQLL bmy_03401T0/1-634 MSRTPASSAG SNAGSAPEAP TSLPAPPATS SPTGASSAQQ QLMQQMIQLL BACU003950/1-601 MSRTPASSAG SNAGSAPEAP TSLPAPPATS SPTGASSAQQ QLMQQMIQLL ENSTTRP00000012658/1-601 MSRTPASSTG SNAGSAPEAP TSLPAPPATS SPTGASSAQQ QLMQQMIQLL 601 650 ENSBTAP00000002028/1-612 AGSGSSQVQT PEVRFQQQLE QLNSMGFINH EANLQALIAT GGDINAAIER ENSP00000357292/1-601 AGSGNSQVQT PEVRFQQQLE QLNSMGFINR EANLQALIAT GGDINAAIER bmy_03401T0/1-634 AGSGNSQVQT PEVRFQQQLE QLNSMGFINR EANLQALIAT GGDINAAIER BACU003950/1-601 AGSGNSQVQT PEVRFQQQLE QLNSMGFINR EANLQALIAT GGDINAAIER ENSTTRP00000012658/1-601 AGSGNSQVQT PEVRFQQQLE QLNSMGFINR EANLQALIAT GGDINAAIER 651 700 ENSBTAP00000002028/1-612 LLGSQLS ENSP00000357292/1-601 LLGSQLS bmy_03401T0/1-634 LLGSQLS BACU003950/1-601 LLGSQLS ENSTTRP00000012658/1-601 LLGSQLS