KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:17 2014 Check: 00 .. Name: ENSP00000312250/1-496 Len: 501 Check: 587 Weight: 1.00 Name: ENSBTAP00000002065/1-497 Len: 501 Check: 1443 Weight: 1.00 Name: bmy_10992T0/1-497 Len: 501 Check: 386 Weight: 1.00 Name: BACU017937/1-499 Len: 501 Check: 6850 Weight: 1.00 Name: ENSTTRP00000011164/1-496 Len: 501 Check: 7327 Weight: 1.00 // 1 50 ENSP00000312250/1-496 MALWRGSAYA GFLALAVGCV FLLEPELPGS ALRSLWSSLC LG----PAPA ENSBTAP00000002065/1-497 MALWRGSAYA GFLALAVGCV FLLEPQLPGS ALRSLWSSLQ LG----PAPA bmy_10992T0/1-497 MALWRGSAYA GFLALAVGCV FLLEPQLPGS ALRSLWSSLQ LGPA--PAPA BACU017937/1-499 MALWRGSAYA GFLALAVGCV FLLEPQLPGS ALRSLWSSLQ LGPAPAPAPA ENSTTRP00000011164/1-496 MALWRGSAYA GFLALAVGCV FLLEPQLPGS ALRSLWSSLQ LG----PAPA 51 100 ENSP00000312250/1-496 PPGPVSPEGR LAAAWDALIV RPVRRWRRVA VGVNACVDVV LSGVKLLQAL ENSBTAP00000002065/1-497 PPGVGSPEGR LAAAWDALIV RPARRWRRVA VGVNACVDVV LSGVKLLQAL bmy_10992T0/1-497 PPGPGSPEGR LSAAWDALIV RPARRWRRVA VGVNACVDVV LSGVKLLQAL BACU017937/1-499 PPGPGSPEGR LSAAWDALIV RPARRWRRVA VGVNACVDVV LSGVKLLQAL ENSTTRP00000011164/1-496 PPGPGSPEGR LAAAWDALIV RPARRWRRVA VGVNACVDVV LSGVKLLQAL 101 150 ENSP00000312250/1-496 GLSPGNGKDH SILHSRNDLE EAFIHFMGKG AAAERFFSDK ETFHDIAQVA ENSBTAP00000002065/1-497 GLSPGNGKDH SELHSRNDLE EAFVHFMGKG AAAERFFSDK ETFHDIAQVA bmy_10992T0/1-497 GLNPGNGKDH TELRSRNDLE EAFVHFMGKG AAAERFFSDK ETFHNIAQVA BACU017937/1-499 GLNPGNGKDH TELRSRNDLE EAFVHFMGKG AAAERFFSDK ETFHNIAQIA ENSTTRP00000011164/1-496 GLNPGNGKDH TELRSRNDLK EAFIHFMGKG AAAERFFSDK ETFHNIAQIA 151 200 ENSP00000312250/1-496 SEFPGAQHYV GGNAALIGQK FAANSDLKVL LCGPVGPKLH ELLDDNVFVP ENSBTAP00000002065/1-497 SEFPEAQHYV GGNAALIGQK FAANSDLKVL LCGPVGPKLH ELLDDNVFVP bmy_10992T0/1-497 SEFPGAQHYV GGNAALIGQK FAANADLKVL LCGPVGPKLH ELLDDNVFVP BACU017937/1-499 SEFPGAQHYV GGNAALIGQK FAANADLKVL LCGPVGPKLH ELLDDNVFVP ENSTTRP00000011164/1-496 SEFPGAQHYV GGNAALIGQK FAANSDLKVL LCGPVGPKLH ELLDDNVFVP 201 250 ENSP00000312250/1-496 PESLQEVDEF HLILEYQAGE EWGQLKAPHA NRFIFSHDLS NGAMNMLEVF ENSBTAP00000002065/1-497 PESLQEVDEF HLILEYQAGE EWDQLKAPHA NRFIFSHDLS NGAMNMLEVF bmy_10992T0/1-497 PESLQEVDEF HLILEYQAGE EWGQLKAPHA NRFIFSHDLS NGAMNMLEVF BACU017937/1-499 PESLQEVDEF HLILEYQAGE EWGQLKAPHA NRFIFSHDLS NGAMNMLEVF ENSTTRP00000011164/1-496 PESLQEVDEF HLILEYQAGE EWGQLKAPHA NRFIFSHDLS NGAMNMLEVF 251 300 ENSP00000312250/1-496 VSSLEEFQPD LVVLSGLHMM EGQSKELQRK RLLEVVTSIS DIPTGIPVHL ENSBTAP00000002065/1-497 VSSLEEFQPD LVVLSGLHMM EGQSKEFQRK RLLEVVTSIS DIPTGVPVHL bmy_10992T0/1-497 VSSLEEFQPD LVVLSGLHMM EGQSKEFQRK RLLEVMTSIS DIPTGIPVHL BACU017937/1-499 VSSLEEFQPD LVVLSGLHMM EGQSKEFQRK RLLEVMTSIS DIPTGIPVHL ENSTTRP00000011164/1-496 VSSLEEFQPD LVVLSGLHMM EGQSKEFQRK RLLEVMTAIS DIPTGIPVHL 301 350 ENSP00000312250/1-496 ELASMTNREL MSSIVH-QVF PAVTSLGLNE QELLFLTQSA SGPHSSLSSW ENSBTAP00000002065/1-497 ELASMTNKEL MSTIVHQQVF PAVTSLGLNE QELLFLSQSA SGPHSSLSSW bmy_10992T0/1-497 ELASMTNREL MSSIVH-QVF SAVTSLGLNE QELLFLSQSA SGPHSSLSSW BACU017937/1-499 ELASMTNREL MSSIVH-QVF SAVSSLGLNE QELLFLSQSA SGPHSSLSSW ENSTTRP00000011164/1-496 ELASMTNREL MSSIVH-QVF SAVTSLGLNE QELLFLSQSA SGPHSSLSSW 351 400 ENSP00000312250/1-496 NGVPDVGMVS DILFWILKEH GRSKSRASDL TRIHFHTLVY HILATVDGHW ENSBTAP00000002065/1-497 NGVPDVGVVS DILFWILKEH GKSESRASDL SRIHFHTLAY HILATVDGHW bmy_10992T0/1-497 TGVPDVGVVS DILFWILKEH GKSESRASDL TRIHFHTLAY HILATVDGHW BACU017937/1-499 TGVPDVGVVS DILFWILKEH GKSESRASDL TRIHFHTLAY HILATVDGHW ENSTTRP00000011164/1-496 TGVPDVGMVS DILFWILKEH GKSESRASDL TRIHFHTLAY HILATVDGHW 401 450 ENSP00000312250/1-496 ANQLAAVAAG ARVAGTQACA TETIDTSRVS LRAPQEFMTS HSEAGSRIVL ENSBTAP00000002065/1-497 ANQLAAVAAG ARVAATQACA TETIDTRRVS LKAPHEFMTS RLEAGSRVVL bmy_10992T0/1-497 ANQLAAVAAG ARVAGTQACA TETIDTRRVS LKAPREFMTS RSEAGSRVML BACU017937/1-499 ANQLAAVAAG ARVAGTQACA TETIDTRRVS LKAPREFMTS RSEAGSRVML ENSTTRP00000011164/1-496 ANQLAAVAAG ARVAGTQACA TETIDTRRVS LKAPREFMTS RSADGSRVML 451 500 ENSP00000312250/1-496 NPNKPVVEWH REGISFHFTP VLVCKDPIRT VGLGDAISAE GLFYSEVHPH ENSBTAP00000002065/1-497 NPNEPVVEWH REGVSFHFTP VLVCKDPVRT VGLGDAISAE GLFYSEVHPH bmy_10992T0/1-497 NPNEPVVRWH REGVSFHFTP VLVCKDPVRT VGLGDAISAE GLFYSEVHPH BACU017937/1-499 NPNEPVVKWH REGVSFHFTP VLVCKDPVRT VGLGDAISAE GLFYSEVHPH ENSTTRP00000011164/1-496 NPNEPVVEWH REGVSFHFTP VLVCKDPVRT VGLGDAISAE GLFYSEVHPH 501 550 ENSP00000312250/1-496 Y ENSBTAP00000002065/1-497 L bmy_10992T0/1-497 - BACU017937/1-499 - ENSTTRP00000011164/1-496 L