KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:22 2014 Check: 00 .. Name: bmy_12124T0/1-682 Len: 684 Check: 682 Weight: 1.00 Name: BACU017450/1-582 Len: 684 Check: 1737 Weight: 1.00 Name: ENSBTAP00000002080/1-666 Len: 684 Check: 7281 Weight: 1.00 Name: ENSP00000365567/1-663 Len: 684 Check: 4454 Weight: 1.00 Name: ENSTTRP00000008076/1-660 Len: 684 Check: 6356 Weight: 1.00 // 1 50 bmy_12124T0/1-682 VHLNINIVHI F--IDYTTLI IVDILINHTV RLKHASSVTL TFLLLGVEFE BACU017450/1-582 MSARLSAPSP P---RWQ--L LLSLLL---L GAAPGPRRSA AFYLPGLA-P ENSBTAP00000002080/1-666 SSSVLPLLAP PSCSRWYCRD FMSLLL---L RVXPGPRRGA AFYLPGLA-P ENSP00000365567/1-663 MSARLPVLSP P---RWPRLL LLSLLL---L GAVPGPRRSG AFYLPGLA-P ENSTTRP00000008076/1-660 MSARLPASSP P---RWQ--L LLSLLL---L GAAPGPRRSA AFYLPGLA-P 51 100 bmy_12124T0/1-682 ATSPDQEKLI DKKFLELKAF RNYWRHLQAE IELFVNRLDS VESVLPYEYT BACU017450/1-582 VNFCEEEKKS DE-------- ------CKAE IELFVNRLDS VESVLPYEYT ENSBTAP00000002080/1-666 VNFCEEEKKT DE-------- ------CKAE IELFVNRLDS VESVLPYEYT ENSP00000365567/1-663 VNFCDEEKKS DE-------- ------CKAE IELFVNRLDS VESVLPYEYT ENSTTRP00000008076/1-660 VNFCEEEKKS DE-------- ------CKAE IELFVNRLDS VESVLPYEYT 101 150 bmy_12124T0/1-682 AFDFCQASEG KRPSENLGQV LFGERIEPSP YKFTFNKEET CKLVCTKTYH BACU017450/1-582 AFDFCQASEG KRPSENLGQV LFGERIEPSP YKFTFNKEET CKLVCTKTYH ENSBTAP00000002080/1-666 AFDFCQASEG KRPSENLGQV LFGERIEPSP YKFTFKKEET CKLVCTKTYH ENSP00000365567/1-663 AFDFCQASEG KRPSENLGQV LFGERIEPSP YKFTFNKKET CKLVCTKTYH ENSTTRP00000008076/1-660 AFDFCQASEG KRPSENLGQV LFGERIEPSP YKFTFNKEET CKLVCTKTYH 151 200 bmy_12124T0/1-682 TEKAEDKQKL EFLKKSMLLN YQHHWIVDNM PVTWCYDVED GQRFCNPGFP BACU017450/1-582 TEKAEDKQKL EFLKKSMLLN YQHHWIVDNM PVTWCYDVED GQRFCNPGFP ENSBTAP00000002080/1-666 TEKAEDKQKL EFLKKSMLLN YQHHWIVDNM PVTWCYEVED SQRFCNPGFP ENSP00000365567/1-663 TEKAEDKQKL EFLKKSMLLN YQHHWIVDNM PVTWCYDVED GQRFCNPGFP ENSTTRP00000008076/1-660 TEKAEDKQKL EFLKKSMLLN YQHHWIVDNM PVTWCYDVED GQRFCNPGFP 201 250 bmy_12124T0/1-682 IGCYITDKGH AKDACVINSE FHERDTFYIF NHVDIKIYYH VVETGSMGAR BACU017450/1-582 IGCYITDKGH AKDACVINSE FHERDTFYIF NHVDIKIHYH VVETGSMGAR ENSBTAP00000002080/1-666 IGCYITDKGH AKDACVINSE FHERDTFYIF NHVDIKIYYH VVETGSMGAR ENSP00000365567/1-663 IGCYITDKGH AKDACVISSD FHERDTFYIF NHVDIKIYYH VVETGSMGAR ENSTTRP00000008076/1-660 IGCYITDKGH AKDACVINSE FHERDTFYIF NHVDIKIYYH VVETGSMGAR 251 300 bmy_12124T0/1-682 LVAAKLEPKS FKHTHIDKPD CSGPPMDISN KASGEIRIAY TYSVSFQEDK BACU017450/1-582 LVAAKLEPKS FKHTHIDKPD CSGPPMDISN KASGEIRIAY TYSVSFQEDK ENSBTAP00000002080/1-666 LVAAKLEPKS FKHTHIDKPD CSGPPMDISN KASGEIKVAY TYSINFEEEK ENSP00000365567/1-663 LVAAKLEPKS FKHTHIDKPD CSGPPMDISN KASGEIKIAY TYSVSFEEDD ENSTTRP00000008076/1-660 LVAAKLE-KT FKHTHIDKTD CSGPPMDISN KASGEIRIAY TYSVSFQEDK 301 350 bmy_12124T0/1-682 NIRWASRWDY ILESMPHTHI QWFSIMNSLV IVLFLSGMVA MIMLRTLHKD BACU017450/1-582 NIRWASRWDY ILESMPHTHI QWFSIMNSLV IVLFLSGMVA MIMLRTLHKD ENSBTAP00000002080/1-666 NIRWASRWDY ILESMPHTHI QWFSIMNSLV IVLFLSGMVA MIMLRTLHKD ENSP00000365567/1-663 KIRWASRWDY ILESMPHTHI QWFSIMNSLV IVLFLSGMVA MIMLRTLHKD ENSTTRP00000008076/1-660 NIRWASRWDY ILESMPHTHI QWFSIMNSLV IVLFLSGMVA MIMLRTLHKD 351 400 bmy_12124T0/1-682 IARYNQMDST EDAQEEFGWK LVHGDIFRPP RKGMLLSVFL GSGTQILIMT BACU017450/1-582 IARYNQMDST EDAQEEFGWK LVHGDIFRPP RKGMLLSVFL GSGTQILIMT ENSBTAP00000002080/1-666 IARYNQMDST EDAQEEFGWK LVHGDIFRPP RKGMLLSVFL GSGTQILIMT ENSP00000365567/1-663 IARYNQMDST EDAQEEFGWK LVHGDIFRPP RKGMLLSVFL GSGTQILIMT ENSTTRP00000008076/1-660 IARYNQMDST EDAQEEFGWK LVHGDIFRPP RKGMLLSVFL GSGTQILIMT 401 450 bmy_12124T0/1-682 FVTLFFACLG FLSPANRGAL MTCAVVLWVL LGTPAGYVAA RFYKSFGGEK BACU017450/1-582 FVTLFFACLG FLSPANRGAL MTCAVVLWVL LGTPAGYVAA RFYKSFGGEK ENSBTAP00000002080/1-666 FVTLFFACLG FLSPANRGAL MTCAVVLWVL LGTPAGYVAA RFYKSFGGEK ENSP00000365567/1-663 FVTLFFACLG FLSPANRGAL MTCAVVLWVL LGTPAGYVAA RFYKSFGGEK ENSTTRP00000008076/1-660 FVTLFFACLG FLSPANRGAL MTCAVVLWVL LGTPAGYVAA RFYKSFGGEK 451 500 bmy_12124T0/1-682 WKTNVLLTSF LCPGIVFADF FIMNLILWGE GSSAAIPFGT LVAILALWFC BACU017450/1-582 WKTNVLLTSF LCPGIVFADF FIMNLILWGE GSSAAIPFGT LVAILALWFC ENSBTAP00000002080/1-666 WKTNVLLTSF LCPGIVFADF FIMNLILWGE GSSAAIPFGT LVAILALWFC ENSP00000365567/1-663 WKTNVLLTSF LCPGIVFADF FIMNLILWGE GSSAAIPFGT LVAILALWFC ENSTTRP00000008076/1-660 WKTNVLLTSF LCPGIVFADF FIMNLILWGE GSSASIPFGT LVAILALWFC 501 550 bmy_12124T0/1-682 ISVPLTFIGA YFGFKKNAIE HPVRTNQIPR QIPEQSFYTK PLPGIIMGGI BACU017450/1-582 ISVPLTFIGA YFGFKKNAIE HPVRTNQIPR QIPEQSFYTK PLPGIIMGGI ENSBTAP00000002080/1-666 ISVPLTFIGA YFGFKKNAIE HPVRTNQIPR QIPEQSFYTK PLPGIIMGGI ENSP00000365567/1-663 ISVPLTFIGA YFGFKKNAIE HPVRTNQIPR QIPEQSFYTK PLPGIIMGGI ENSTTRP00000008076/1-660 ISVPLTFIGA YFGFKKNAIE HPVRTNQIPR QIPEQSFYTK PLPGIIMGGI 551 600 bmy_12124T0/1-682 LPFGCIFIQL FFILNSIWSH QMYYMFGFLF LVFIILVITC SEATILLCYF BACU017450/1-582 LPFGCIFIQL FFILNSI--- ---------- ---------C QSLS------ ENSBTAP00000002080/1-666 LPFGCIFIQL FFILNSIWSH QMYYMFGFLF LVFIILVITC SEATILLCYF ENSP00000365567/1-663 LPFGCIFIQL FFILNSIWSH QMYYMFGFLF LVFIILVITC SEATILLCYF ENSTTRP00000008076/1-660 LPFGCIFIQL FFILNSIWSH QMYYMFGFLF LVFIILVITC SEATILLCYF 601 650 bmy_12124T0/1-682 HLCAEDYHWQ WRSFLTSGFT AVYFLIYAIH YFFSKLQITG TASTILYFGY BACU017450/1-582 ---------- ---------- ---------- ---SSIKARG CFSAP----- ENSBTAP00000002080/1-666 HLCAEDYHWQ WRSFLTSGFT AVYFLIYAIH YFFSKLQITG TASTILYFGY ENSP00000365567/1-663 HLCAEDYHWQ WRSFLTSGFT AVYFLIYAVH YFFSKLQITG TASTILYFGY ENSTTRP00000008076/1-660 HLCAEDYHWQ WRSFLTSGFT AVYFLIYAIH YFFSKLQITG TASTILYFGY 651 700 bmy_12124T0/1-682 TMIMVLIFFL FTGTIGFFAC FWFVTKIYSV VKVD BACU017450/1-582 ---------L VRREIGKVQC ----EKETGT NSKN ENSBTAP00000002080/1-666 TMIMVLIFFL FTGTIGFFAC FWFVTKIYSV VKVD ENSP00000365567/1-663 TMIMVLIFFL FTGTIGFFAC FWFVTKIYSV VKVD ENSTTRP00000008076/1-660 TMIMVLIFFL FTGTIGFFAC FWFVTKIYSV VKVD