KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:16:23 2014 Check: 00 .. Name: ENSTTRP00000015042/1-423 Len: 512 Check: 449 Weight: 1.00 Name: ENSP00000313422/1-360 Len: 512 Check: 1809 Weight: 1.00 Name: bmy_01466T0/1-435 Len: 512 Check: 8644 Weight: 1.00 Name: ENSBTAP00000002087/1-313 Len: 512 Check: 4451 Weight: 1.00 // 1 50 ENSTTRP00000015042/1-423 ERAERNEERT WQLRIVAVSR GAAACAGVER PGGRALRGRS GGSGSPRRPG ENSP00000313422/1-360 ---------- ------MERA GPAGEEG--- -------GAR EGRLLPRAPG bmy_01466T0/1-435 ---------- ------MLRA RRKDSDGRGH SCGKGPAGSG TGARLESRSL ENSBTAP00000002087/1-313 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015042/1-423 YPGVGVAEDR AVARIYPCPG WPGPERAALG TRLWPALSPV ARLRLQPAAL ENSP00000313422/1-360 AWVLRACAER AALEV----- --GAASADTG V--------- ----RGCGAR bmy_01466T0/1-435 VWELRLEPQL ASP------- --GGQCVRLS F--------- ----LGC--- ENSBTAP00000002087/1-313 -------PQL ASL------- --GGERARLG F--------- ----LGC--- 101 150 ENSTTRP00000015042/1-423 WLTSALASAR GVAAGPGGEG RKRKGRRAVR TPREAARLLD PEAARPAPPP ENSP00000313422/1-360 GPAPLLASAG GGRARDGTWG VRTKGSGAAL PSRPASRAAP RPEASSPPLP bmy_01466T0/1-435 ---------- ---PRDGTWG LRTKGSSALL RGRTASQSTV PGRKSPSRRF ENSBTAP00000002087/1-313 ---------- ---PTDGTWG FRTKGSSASL RGRTASQCTA RAGSHPAVAS 151 200 ENSTTRP00000015042/1-423 LGR------- -----RVRTR GNGKRKCSWA GFSGLAVGKS GER------- ENSP00000313422/1-360 LEK------- ---------- --ARGGLS-- -------GPQ GGR------- bmy_01466T0/1-435 LTRRRGAESA VRPDARLRRE RSSRGDFLSG GEAAEGAGWR GPQRRIRESA ENSBTAP00000002087/1-313 ---------- ---------- --SREGVV-- ------QGWR SRR------- 201 250 ENSTTRP00000015042/1-423 ---------- ---------- ---------- ---------- ---------- ENSP00000313422/1-360 ---------- ---------- ---------- ---------- ---------- bmy_01466T0/1-435 GYPGVGVSED RAVARTPSVS LLRVVTRPRV EPPSEPSLWA GPVINPQFKR ENSBTAP00000002087/1-313 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000015042/1-423 -----YSGAL NHIFVQLGLR YGGWPPQPRK SLSTGCKPSS RKPSRRVSAL ENSP00000313422/1-360 -----ARGAM AHVGSRKRSR ------SRSR SRGRGSEKRK KKSRKDTSRN bmy_01466T0/1-435 VSPSPARGAM AHVGSRKRSR ------SRSR SRGRGSEKKR KKSSKDAPRS ENSBTAP00000002087/1-313 -----TRGAM AHVGSRKRSR ------SRSR SRGRGSEKKR KKSSKDVRRS 301 350 ENSTTRP00000015042/1-423 CSQPKPATGQ SRGRRFTSSP PGLPASPSPC VTERSKHKAR RRPR------ ENSP00000313422/1-360 CSAST----- SQGRKA-STA PGAEASPSPC ITERSKQKAR RRTRSSSSSS bmy_01466T0/1-435 CSASR----- SQSRKASTTS SGAE------ --ERSKHKAR RRPR-SSSSS ENSBTAP00000002087/1-313 CSASR----- SQSRKASSTS SGAEASPSPC ITERSKHKAR RRPR-SSSSS 351 400 ENSTTRP00000015042/1-423 --SSPSSSPS SSSSCSSSSD GRKKRGKHKD KKR-KKKKKR KKKLKKRDKD ENSP00000313422/1-360 SSSSSSSSSS SSSSSSSSSD GRKKRGKYKD KRR--KKKKK RKKLKKKGKE bmy_01466T0/1-435 SSSRSSSGSS SSSSSSSSSD GRKKRGKHKD KKR-KKRKKR KKKLKKRDKD ENSBTAP00000002087/1-313 SSSSSSSSSS SSSSSSSSSD GRKKRGKHKD KKRKKKKKKR KKKLKKRGKE 401 450 ENSTTRP00000015042/1-423 KAKVQQTEAL PGPSLDQWHR AAEEDEDGPV LTDEQKSRIQ AMKPMTKEEW ENSP00000313422/1-360 KAEAQQVEAL PGPSLDQWHR SAGEEEDGPV LTDEQKSRIQ AMKPMTKEEW bmy_01466T0/1-435 KAKVRQTEAV PGPSLDQWHR AAEQEEGGPV LTDEQKSRIQ AMKPMTKEEW ENSBTAP00000002087/1-313 KARMQQTEAL PGPSLDQWHR AAKEEEDGPV LTDEQKSRIQ AMKPMTKEEW 451 500 ENSTTRP00000015042/1-423 DARQSIIRKV MDPETGRTR- -LIKGDGEVL EEIVTKERHR EINKVGVA-- ENSP00000313422/1-360 DARQSIIRKV VDPETGRTR- -LIKGDGEVL EEIVTKERHR EINKQATRGD bmy_01466T0/1-435 DARQSVIRKV VDPETGRTR- -LIKGDGEVL EEIVTKERHR EINKQATRGD ENSBTAP00000002087/1-313 DARQSVIRKV VDPETGRTRP LLPIGWSRQL QGLVTKERHR EINKQATRGD 501 550 ENSTTRP00000015042/1-423 --PLPAHPQL CF ENSP00000313422/1-360 CLAFQMRAGL LP bmy_01466T0/1-435 GLAFQMRAGL LP ENSBTAP00000002087/1-313 GLAFQMRAGL LP