KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:27 2014 Check: 00 .. Name: bmy_04487T0/1-208 Len: 291 Check: 1733 Weight: 1.00 Name: ENSP00000433126/1-291 Len: 291 Check: 4932 Weight: 1.00 Name: ENSBTAP00000002111/1-291 Len: 291 Check: 4710 Weight: 1.00 Name: BACU019122/1-291 Len: 291 Check: 3243 Weight: 1.00 Name: ENSTTRP00000005811/1-291 Len: 291 Check: 3558 Weight: 1.00 // 1 50 bmy_04487T0/1-208 MTKGRVVERS QTGALHTTPP GDKAAGPRGP SAPGSGDHLK EKACAEAGSA ENSP00000433126/1-291 MAKGRVAERS QLGAHHTTPV GDGAAGTRGL AAPGSRDHQK EKSWVEAGSA ENSBTAP00000002111/1-291 MTKGRAVERS QTAALHSTPP GDKATGTRGP STPSSRDHLK EKACAEAGSA BACU019122/1-291 MTKGRVVERS QTGALLTTPP GDKAAGPRGP SAPGSGDHLK EKACAEAGSA ENSTTRP00000005811/1-291 MTKGRVVERS QTGSLHTTPP GDKAAGPRGP SAPGSGNHLK EKACAEAGSA 51 100 bmy_04487T0/1-208 RMSLLILVSI FLSAAFVMFL VYKNFPQLSE EERVNMKVPR DMDDAKALGK ENSP00000433126/1-291 RMSLLILVSI FLSAAFVMFL VYKNFPQLSE EERVNMKVPR DMDDAKALGK ENSBTAP00000002111/1-291 RMSLLILVSI FLSAAFVMFL VYKNFPQLSE EERMNMKVPR DMDDAKALGK BACU019122/1-291 RMSLLILVSI FLSAAFVMFL VYKNFPQLSE EERVNMKVPR DMDDAKALGK ENSTTRP00000005811/1-291 RMSLLILVSI FLSAAFVMFL VYKNFPQLSE EERMNMKVPR DMDDAKALGK 101 150 bmy_04487T0/1-208 VLSKYKDTFY VQ-------- ---------- ---------- ---------- ENSP00000433126/1-291 VLSKYKDTFY VQVLVAYFAT YIFLQTFAIP GSIFLSILSG FLYPFPLALF ENSBTAP00000002111/1-291 VLSKYKDTFY VQVLVAYFAT YIFLQTFAIP GSIFLSILSG FLYPFPLALF BACU019122/1-291 VLSKYKDTFY VQVLVAYFAT YIFLQTFAIP GSIFLSILSG FLYPFPLALF ENSTTRP00000005811/1-291 VLSKYKDTFY VQVLVAYFAT YIFLQTFAIP GSIFLSILSG FLYPFPLALF 151 200 bmy_04487T0/1-208 ----CSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQ- ---------- ENSP00000433126/1-291 LVCLCSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQV ERHREHLINY ENSBTAP00000002111/1-291 LVCLCSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQV ERHREHLINY BACU019122/1-291 LVCLCSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQV ERHREHLINY ENSTTRP00000005811/1-291 LVCLCSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQV ERHREHLINY 201 250 bmy_04487T0/1-208 ---------- -----NAVSG SLKNLYQPTL LMHFISVAPP SFVAIKAGTT ENSP00000433126/1-291 IIFLRITPFL PNWFINITSP VINVPLKVFF IGTFLGVAPP SFVAIKAGTT ENSBTAP00000002111/1-291 IIFLRITPFL PNWFINITSP VINVPLKVFF IGTFLGVAPP SFVAIKAGTT BACU019122/1-291 IIFLRITPFL PNWFINITSP VINVPLKVFF IGTFLGVAPP SFVAIKAGTT ENSTTRP00000005811/1-291 IIFLRITPFL PNWFINITSP VINVPLKVFF IGTFLGVAPP SFVAIKAGTT 251 300 bmy_04487T0/1-208 LYQLTTAGEA VSWNSL---- ---------- AFENLKAFKI - ENSP00000433126/1-291 LYQLTTAGEA VSWNSIFILM ILAVLSILPA IFQKKLKQKF E ENSBTAP00000002111/1-291 LYQLTTAGEA VSWNSVFVLM ILALLSILPA IFQKKLKQKF E BACU019122/1-291 LYQLTTAGEA VSWNSVFVLM ILALLSILPA IFQKKLKQKF E ENSTTRP00000005811/1-291 LYQLTTAGEA VSWNSVFVLM ILALLSILPA IFQKKLKQKF E