KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:16:27 2014 Check: 00 .. Name: ENSBTAP00000002116/1-930 Len: 971 Check: 403 Weight: 1.00 Name: ENSTTRP00000009969/1-920 Len: 971 Check: 2735 Weight: 1.00 Name: bmy_11394T0/1-922 Len: 971 Check: 1284 Weight: 1.00 Name: BACU008431/1-961 Len: 971 Check: 1086 Weight: 1.00 // 1 50 ENSBTAP00000002116/1-930 ---------- ---------- ---------- ---------M GDPEEYEDQL ENSTTRP00000009969/1-920 ---------- ---------- ---------- ---------M GDSQENEDKL bmy_11394T0/1-922 ---------- ---------- ---------- ---------M GDSQETEDKL BACU008431/1-961 MFLELVIPGD GQKRKPGTCS VGYAGGSDHY RQLNNQDSAM GDSQENEDKL 51 100 ENSBTAP00000002116/1-930 EETLEQKEYE DHDSVSIPME EAEGDTIQEE EAEARVNQLT DTDYHTTSQH ENSTTRP00000009969/1-920 EEFLEQKEYE D---PGFP-- -----TLQVE EAEAQLTEPT ATDYHTASHR bmy_11394T0/1-922 EEFLEQKEYE D---LGFP-- -----TLQVE EAEAQLTEPT ATDYHTASHR BACU008431/1-961 EEFLEQKEYE D---LGFP-- -----TLQVE EAEAQLTEPT ATDYHTAPPR 101 150 ENSBTAP00000002116/1-930 -PETHKVCVQ LRELVMDEKN QEIQWMETAR WVGLEENLGK DGIWGRPHLP ENSTTRP00000009969/1-920 PPDVLEVVVE LRELVMDEKN QELQWMETAR WVRLEENLGK DGVWGRPHLS bmy_11394T0/1-922 PPDILEVLVE LRELVMDEKN QELQWMETAR WVRLEENLGK DGIWGRPHLS BACU008431/1-961 PPDIFEVLVE LRELVMDEKN QELQWMETAR WVRLEENLGK DGIWGRPHLS 151 200 ENSBTAP00000002116/1-930 YLNFWSLLEL QKAFAKGTVL LDLPGKSLAE VANQLLDRFT FEGQIQPDDQ ENSTTRP00000009969/1-920 YLTFWSLLEL QKAFAKGTVL LDLPEKSLAG VANQLLDRFI FEGQIQPQDR bmy_11394T0/1-922 YLTFWSLLEL QKAFAKGTVL LDLPEKSLAG VASQLLDRFI FEGQIQPQDR BACU008431/1-961 YLTFWSLLEL QKAFAKGTVL LDLPEKSLAG VASQLLDRFI FEGQIQPQDR 201 250 ENSBTAP00000002116/1-930 DNLLRVLLLK HSHASDMEAL GGVKPVVVTH SGDPSEPLLP QHPSLETELF ENSTTRP00000009969/1-920 ENLLRVLLLK HSHARDVEAL GSVKPAVLTR SEDPSQPLLP QHPSLETELF bmy_11394T0/1-922 ENLFRVLLLK HSHARDVEAL GSVKPAVLTR SGDPSQPLLP QHPSLETELF BACU008431/1-961 ENLFRVLLLK HSHARDVEAL GSVKPAVLTR SGDPSQPLLP QHPSLETELF 251 300 ENSBTAP00000002116/1-930 CEQGEGSTRG HAPE-ILGKS PQDWEATLVL VGCARFLKRP VLGFVRLKEP ENSTTRP00000009969/1-920 CEQGEGSAEG HSSSGMLGRS PQDREATLVL VGCARFLERP VLGFVRLKEP bmy_11394T0/1-922 CEQGEGSAEG HSSSGMLGKS PQDWEATLVL VGCARFLERP VLGFVRLKEP BACU008431/1-961 CEQGEGSAEG HSSSAMLGKS PQDWEATLVL VGCARFLERP VLGFVRLKEP 301 350 ENSBTAP00000002116/1-930 MEPEPKPEGS EEPAVPVRFL IVLLGPEGPN INYTQLGRAA ATLMSERVFW ENSTTRP00000009969/1-920 METEQKPQEP EGPAVPVRFL IVLLGPEAPN IDYTQLGRAA ATLMSERVFR bmy_11394T0/1-922 METEQKPEEP EAPAVPVRFL IVLLGPEAPN IDYTQLGRAA ATLMSERVFR BACU008431/1-961 METEQKPEEP EEPAVPVRFL IVLLGPEAPN IDYTQLGRAA ATLMSERVFR 351 400 ENSBTAP00000002116/1-930 NDAYLAQSKE TLVQSLEGFL DCSLVLPPLD APSEKALLSL VPVQKELLRR ENSTTRP00000009969/1-920 TDAYLAQNKE MLVHSLEGFL DCSLVLPPTD TPSEDALLSL VPVQKELLKR bmy_11394T0/1-922 TDAYLAQNKE MLVHSLEGFL DCSLVLPPTD TPSKDALLSL VPVQKELLKR BACU008431/1-961 TDAYLAQNKE MLVHSLEGFL DCSLVLPPTD TPSKDALLSL VPVQKELLKR 401 450 ENSBTAP00000002116/1-930 RYLPSPAKPD PSIFKDLDVK KGPGDTPEDP LQRTGKLFGG LVRDIRRRYP ENSTTRP00000009969/1-920 RYLPSSTKPE PSFLKGLDLN GGLEDTQDDP LQRTGRLFGG LVRDIRRRYP bmy_11394T0/1-922 RYLPSSAKPE PSFLKGLDLN GGLEDTQDDP LQRTGRLFGG LVRDIRRRYP BACU008431/1-961 RYLPSSAKPE PSFLKGLDLN GGLEDTKDDP LQRTGRLFGG LVRDIRRRYP 451 500 ENSBTAP00000002116/1-930 RYLSDITDAL SPQVLSAIIF IYFAALTPAI TFGGLLGDKT ENMIGVSELL ENSTTRP00000009969/1-920 RYLSDITDAL NPQVLSAIIF IYFAALSPAI TFGGLLGEKT HNLMGVSELL bmy_11394T0/1-922 RYLSDITDAL SPQVLSAIIF IYFAALSPAI TFGGLLGEKT HNLMGVSELL BACU008431/1-961 RYLSDITDAL NPQVLSAIIF IYFAALSPAI TFGGLLGEKT HNLMGVSELL 501 550 ENSBTAP00000002116/1-930 LSTALQGIIF SLLGAQPLLV LGFSGPLLVF EEAFYSFCQT NNLEYIVGRV ENSTTRP00000009969/1-920 ISTAAQGILF SLLGAQPLLV VGFSGPLLVF EEAFFSFCKS NGLEYIVGRV bmy_11394T0/1-922 ISTAVQGILF SLLGAQPLLV VGFSGPLLVF EEAFFSFCKS NGLEYIVGRV BACU008431/1-961 ISTAAQGILF SLLGAQPLLV VGFSGPLLVF EEAFFSFCKS NGLEYIVGRV 551 600 ENSBTAP00000002116/1-930 WIGFWLILLV VLVVAFEGSF LVRFISRYTQ EIFSFLISLI FIYETFYKLV ENSTTRP00000009969/1-920 WIGFWLVLLV VLVVAFEGSF LVRFISRYTQ EIFSFLISLI FIYETFSKLV bmy_11394T0/1-922 WIGFWLILLV VLVVAFEGSF LVRFISRYTQ EIFSFLISLI FIYETFSKLV BACU008431/1-961 WIGFWLILLV VLVVAFEGSF LVRFISRYTQ EIFSFLISLI FIYETFSKLV 601 650 ENSBTAP00000002116/1-930 TIFQDHPLQK NYDHDVLTTP KPQAALPNTA LLSLVLMAGT FFLAMMLRKF ENSTTRP00000009969/1-920 TIFQDHPLLE NYDHNVTRIP KPQAPLPNTA LLSLVLMAGT FLFAMTLRKF bmy_11394T0/1-922 TIFQDHPLLE NYDHNVTRIP KPQAPLPNTA LLSLVLMAGT FLFAMMLRKF BACU008431/1-961 TIFQDHPLLE NYDHNVTRIP KPQAPLPNTA LLSLVLMAGT FLFAMMLRKF 651 700 ENSBTAP00000002116/1-930 KNSSYFPGKL RRIIGDFGVP ISILIMVMVD ALIQDTYTQK LSVPEGLSVS ENSTTRP00000009969/1-920 KNSSYFPGKL RRVIGDFGVP ISILIMVMVD AFIQDTYTQK LSVPKGLTVS bmy_11394T0/1-922 KNSSYFPGKL RRVIGDFGVP ISILIMVMVD ALIQDTYTQK LSVPKGLTVS BACU008431/1-961 KNSSYFPGKL RRVIGDFGVP ISILIMVMVD ALIQDTYTQK LSVPKGLTVS 701 750 ENSBTAP00000002116/1-930 NPTERDWLIH PLGIRVEFPI WMMFASALPA LLVFILIFLE SQITTLIISK ENSTTRP00000009969/1-920 NTSARGWLIH PLGLYKPFPI WMMFASALPA LLVFILIFLE SQITTLIISK bmy_11394T0/1-922 NTSARGWLIH PLGLYKPFPI WMMFASALPA LLVFILIFLE SQITTLIISK BACU008431/1-961 NTSARGWLIH PLGLYKPFPI WMMFASALPA LLVFILIFLE SQITTLIISK 751 800 ENSBTAP00000002116/1-930 PERKMVKGSG FHLDLLLIIG MGGVGAIFGM PWLSATTVRT VTHANALTVM ENSTTRP00000009969/1-920 PERKVAKGSG FHLDLLLVMG MGGVATLFGM PWLSATTVRS VTHANALTVM bmy_11394T0/1-922 PERKVVKGSG FHLDLLLVMG MGGVATLFGM PWLSATTVRS VTHANALTVM BACU008431/1-961 PERKVVKGSG FHLDLLLVMG MGGVATLFGM PWLSATTVRS VTHANALTVM 801 850 ENSBTAP00000002116/1-930 SKDSTPGAVS QIQGVKEQRI SGLLVAVLVG VSILMGPVLR HIPLAVLFGI ENSTTRP00000009969/1-920 GKPSTPGAAA QIQEVKEQRI SGLLVSVLVG LSILMGPILS HIPLAVLFGI bmy_11394T0/1-922 SKASTPGAAA QIQEVKEQRI SGLLVSVLVG LSILMGPILS HIPLAVLFGI BACU008431/1-961 SKASTPGAAA QIQEVKEQRI SGLLVSVLVG LSILMGPILS HIPLAVLFGI 851 900 ENSBTAP00000002116/1-930 FLYMGVTSLS GIQLFDRVLL LLKPRKYYPE VPYARRVKTW RMHLFTITQI ENSTTRP00000009969/1-920 FLYMGVTSLS GIQLFDRILL LFKPRKYHPD VPYAKRVRTW RMHLFTGTQI bmy_11394T0/1-922 FLYMGVTSLS GIQLFDRILL LFKPRKYHPD VPYAKRVRTW RMHLFTGTQI BACU008431/1-961 FLYMGVTSLS GIQLFDRILL LFKPRKYHPD VPYAKRVRTW RMHLFTGTQI 901 950 ENSBTAP00000002116/1-930 VCLVVLWVVR SIKQISLALP FILILTVPLR RFLLPFIFRD MELKLLDADD ENSTTRP00000009969/1-920 ICLVVLWVVR S--KISLALP FILILTVPLR HFLLPLIFQN LELQCLDADN bmy_11394T0/1-922 ICLVVLWVVR SIKTISLALP FVLILTVPLR HFLLPLIFQN LELQCLDADN BACU008431/1-961 ICLVVLWVVR SIKTISLALP FILILTVPLR RFLLPLIFQN LELQCLDADN 951 1000 ENSBTAP00000002116/1-930 VKLNLDEQNG QDEYDEVAMP V ENSTTRP00000009969/1-920 VKPNFDEENG QDEYDEVAMP V bmy_11394T0/1-922 AKPNFDEENG QDEYDEVAMP V BACU008431/1-961 GKPNFDEENG QDEYDEVAMP V