KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:16:28 2014 Check: 00 .. Name: ENSBTAP00000002117/1-349 Len: 410 Check: 77 Weight: 1.00 Name: ENSP00000268655/1-407 Len: 410 Check: 9585 Weight: 1.00 Name: bmy_02769T0/1-410 Len: 410 Check: 1894 Weight: 1.00 Name: BACU009169/1-196 Len: 410 Check: 9577 Weight: 1.00 // 1 50 ENSBTAP00000002117/1-349 MAAKMEITLS SQSHIQAFSK QERHIIAKLE EKREPALQED WPDPELSRQS ENSP00000268655/1-407 MAAKMEITLS SNT--EASSK QERHIIAKLE EKRGPPLQKN CPDPELCRQS bmy_02769T0/1-410 MAAKMEITLS SQSHIQASSK QERHIIAKLE EKREPALQKD WPDPELSRQS BACU009169/1-196 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000002117/1-349 FRRFCYQEAS GPQEALSHLR QLCRQWLQPE VHTKEQILEL LVLEQFLNIL ENSP00000268655/1-407 FRRFCYQEVS GPQEALSQLR QLCRQWLQPE LHTKEQILEL LVMEQFLTIL bmy_02769T0/1-410 FRRFCYQEVS GPQEALSRLR QLCRQWLQPE VHTKEQILEL LVLEQFLNIL BACU009169/1-196 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000002117/1-349 PAEIQARARH RCPVSSKEIV TLVEDFHRAA KGPKQWVAVC MEGQKVLLEK ENSP00000268655/1-407 PPEIQARVRH RCPMSSKEIV TLVEDFHRAS KKPKQWVAVC MQGQKVLLEK bmy_02769T0/1-410 PPEIQARARH QCPMSSKEIV TLVEDFYRAA KGPKQWVAVC MEGQKVLLEK BACU009169/1-196 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000002117/1-349 TGSQLGEQEL PDFQPQTPRR YPRE----ET FQAGSQDQRS PPHWEKSLLL ENSP00000268655/1-407 TGSQLGEQEL PDFQPQTPRR DLRESSPAEP SQAGAYDRLS PHHWEKSPLL bmy_02769T0/1-410 TGSQLGEQEL PDFQLQTPSR YPRESSLEET SQAGSQDQRS PRHWEKSLLL BACU009169/1-196 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000002117/1-349 QEPTSRLAET ETPRTKSDNK ENPQQEGAKG AKPCVLSVGR PKGSGLQSPE ENSP00000268655/1-407 QEPTPKLAGT EAPRMRSDNK ENPQQEGAKG AKPCAVSAGR SKGNGLQNPE bmy_02769T0/1-410 QDPTPKLAET EASRMKSDNK ENPQQEGAKG AKPCALSVGR LKGNGLQSPE BACU009169/1-196 ---------- ----MKSDNK ENPQQEGAKG AKPCALSVGR PKGNGLQSPE 251 300 ENSBTAP00000002117/1-349 PRGASLSEPR LSQRQFSTPS AQKPFAHYQR HCRELEYIGA PLKSHPLREL ENSP00000268655/1-407 PRGANMSEPR LSRRQVSSPN AQKPFAHYQR HCR-VEYISS PLKSHPLREL bmy_02769T0/1-410 PRGATVSEPR LSRRQVSPPR AQKPFAHYQR HCRELEYISG PLKSHPLREL BACU009169/1-196 PRGATVSESR LSRRQVSPPR AQKPFAHYQR HCRELEYISG PLKSHPLREL 301 350 ENSBTAP00000002117/1-349 KKSKGSRRSL SNHLQRLSHQ PARSAKKPYK CDECGKSFTW NSELKRHQRV ENSP00000268655/1-407 KKSKGGKRSL SNRLQHLGHQ PTRSAKKPYK CDDCGKSFTW NSELKRHKRV bmy_02769T0/1-410 KKSKGSKRNL SSRLQRLGHQ PTRSAKKPYK CDDCGKSFTW NSELKRHKRV BACU009169/1-196 KKSKGSKRNL SSRLQRLGHQ PTRSAKKPYK CDDCGKSFTW NSELKRHKRV 351 400 ENSBTAP00000002117/1-349 HTG------- ---------- ---------- ---------- ---------- ENSP00000268655/1-407 HTGERPYTCG ECGNCFGRQS TLKLHQRIHT GEKPYQCGQC GKSFRQSSNL bmy_02769T0/1-410 HTGERPYTCG ECGNCFGRQS TLKLHQRIHT GEKPYQCGQC GKSFRQSSNL BACU009169/1-196 HTGERPYTCG ECGNCFGRQS TLKLHQRIHT GEKPYQCGQC GKSFRQSSNL 401 450 ENSBTAP00000002117/1-349 ---------- ENSP00000268655/1-407 HQHHRLHHGD bmy_02769T0/1-410 HQHHRLHHGD BACU009169/1-196 HQHHRLHHGD