KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:50 2014 Check: 00 .. Name: bmy_00497T0/1-1129 Len: 1154 Check: 4663 Weight: 1.00 Name: ENSP00000384179/1-1151 Len: 1154 Check: 244 Weight: 1.00 Name: ENSBTAP00000002161/1-1004 Len: 1154 Check: 5298 Weight: 1.00 Name: BACU013168/1-1076 Len: 1154 Check: 9798 Weight: 1.00 Name: ENSTTRP00000003923/1-1148 Len: 1154 Check: 999 Weight: 1.00 // 1 50 bmy_00497T0/1-1129 MSGADG---- ------DAVI PAAARACQND RMGTRKSSNA TESSNWDFFS ENSP00000384179/1-1151 MSRRKQSKPR QIKRPLEDAI EDEEEECPSE ETDIISKGDF PLEESFSTEF ENSBTAP00000002161/1-1004 ---------- ---------- ---------- ---------- ---------- BACU013168/1-1076 MSRRKQSKPR QIKRPLEDAI EEEEEECPSE ETDITSKGDF PLEESFSTEF ENSTTRP00000003923/1-1148 MNRVMLSSGR EICRPLEDAI EEEEEECPSE ETDIISKGDF PLEESFSTEF 51 100 bmy_00497T0/1-1129 GKDYKKICQL MFCATKCDQK --KQNSWSSM DSKNVFHGTL LY-------- ENSP00000384179/1-1151 GPENLSCEEV EYFCNKGDDE GIQETAESDG DTQSEKPGQP GVETDDWDGP ENSBTAP00000002161/1-1004 ---------- ---------- ---------- ---------- ---------- BACU013168/1-1076 GPENLSCEEV EYFCNKGDDE GVQETAESDG DTQSEKPGQP GVEIDDWDGP ENSTTRP00000003923/1-1148 GPENLSCEEV EYFCNKGDDE GVQETAESDG DTQSEKPGQP GVEIDDWDGP 101 150 bmy_00497T0/1-1129 --LMRFQVEG LQSKELCRQT HNSPLSFLLA GLLECTERHL LKPKAHSEVA ENSP00000384179/1-1151 GELEVFQKDG ERKIQSRQQL PVGTTWGPFP GKMDLNNNSL ---KTKAQVP ENSBTAP00000002161/1-1004 ---------- ---------- ---------- ---------- ---------- BACU013168/1-1076 GELEVFQKDG ERKIQSRQQL PVGTTWGPFA GKMDLNNNSL ---KTKAQVP ENSTTRP00000003923/1-1148 GELEVFQKDG ERKIQSRQQL PVGTTWGPFA GKMDLNNNSL ---KTKAQVP 151 200 bmy_00497T0/1-1129 GQVLCRRIHT IPHIPTVFAN AQRN---LHS GGQLWCTTTK AISEGEELIA ENSP00000384179/1-1151 MVLTAGPKWL LDVTWQGVED NKNNCIVYSK GGQLWCTTTK AISEGEELIA ENSBTAP00000002161/1-1004 MVLTAGPKWL LDVTWQGVED NKNNCIVYSK GGQLWCTTTK AISEGEELIA BACU013168/1-1076 MVLTAGPKWL LDVTWQGVED NKNNCIVYSK GGQLWCTTTK AISEGEELIA ENSTTRP00000003923/1-1148 MVLTAGPKWL LDVTWQGVED NKNNCIVYSK GGQLWCTTT- AISEGEELIA 201 250 bmy_00497T0/1-1129 FVVDFDSRLQ AAXQMTLTEG MYPARLLDSI QLLPQQAAMA SILPTAIVNK ENSP00000384179/1-1151 FVVDFDSRLQ AASQMTLTEG MYPARLLDSI QLLPQQAAMA SILPTAIVNK ENSBTAP00000002161/1-1004 FVVDFDSRLQ AASQMTLTEG MYPARLLDSI QLLPQQAAMA SILPTAIVNK BACU013168/1-1076 FVVDFDSRLQ AASQMTLTEG MYPARLLDSI QLLPQQAAMA SILPTAIVNR ENSTTRP00000003923/1-1148 FVVDFDSRLQ AASQMTLTEG MYPARLLDSI QLLPQQAAMA SILPTAIVNK 251 300 bmy_00497T0/1-1129 DIFPCKSCGI WYRSERNLQA HLMYYCSGRQ REAAPVSEEN EDSTPQISSM ENSP00000384179/1-1151 DIFPCKSCGI WYRSERNLQA HLMYYCSGRQ REAAPVSEEN EDSAHQISSL ENSBTAP00000002161/1-1004 DIFPCKSCGI WYRSERNLQA HLMYYCSGRQ REAAPVSEEN EDTAPQISSL BACU013168/1-1076 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003923/1-1148 DIFPCKSCGI WYRSERNLQA HLMYYCSGRQ RETAPVSEEN EDSTPQISSM 301 350 bmy_00497T0/1-1129 CPFPQCTKSF SNARALEMHL NSHSGVKMEE FLPPGASLKC TVCSYTADSV ENSP00000384179/1-1151 CPFPQCTKSF SNARALEMHL NSHSGVKMEE FLPPGASLKC TVCSYTADSV ENSBTAP00000002161/1-1004 CPFPQCTKSF SNARALEMHL NSHSGVKMEE FLPPGASLKC TVCSYTADSV BACU013168/1-1076 ---------- ---------- -----VKMEE FLPPGASLKC TVCSYTADSV ENSTTRP00000003923/1-1148 CPFPQCTKSF SNARALEMHM NSHSGVKMEE FLPPGTSLKC TVCSYTADSV 351 400 bmy_00497T0/1-1129 INFHQHLFSH LTQAAFRCNH CHFGFQTQRE LLQHQELHVP GSKLPRESDM ENSP00000384179/1-1151 INFHQHLFSH LTQAAFRCNH CHFGFQTQRE LLQHQELHVP SGKLPRESDM ENSBTAP00000002161/1-1004 INFHQHLFSH LTQAAFRCNH CHFGFQTQRE LLQHQELHVP GSKLPRESDM BACU013168/1-1076 INFHQHLFSH LTQAAFRCNH CHFGFQTQRE LLQHQELHVP GSKLPRESDM ENSTTRP00000003923/1-1148 INFHQHLFSH LTQAAFRCNH CHFGFQTQRE LLQHQELHVP GSKLPRESDM 401 450 bmy_00497T0/1-1129 EHSPSGTEDS LQPATDLLTR SELPQSQKAM QTKDASSDTE LDKCEKKTQL ENSP00000384179/1-1151 EHSPSATEDS LQPATDLLTR SELPQSQKAM QTKDASSDTE LDKCEKKTQL ENSBTAP00000002161/1-1004 EHSPSGTEDS LQPATDLLTR SELPQSQKAM QTKDASSDTE LDKCEKKTQL BACU013168/1-1076 EHSPSGTEDS LQPATDLLTR SELPQSQKVM QTKDASSDTE LDKCEKKTQL ENSTTRP00000003923/1-1148 EHSPSGTEDS LQPATDLLTR SELP--QKAM QTKDASSDTE LDKCEKKTQL 451 500 bmy_00497T0/1-1129 FLTNQRPEIQ SATNKQSFAY TKIKSEPSSP RLASSPVQPN IGPSFPVGPF ENSP00000384179/1-1151 FLTNQRPEIQ PTTNKQSFSY TKIKSEPSSP RLASSPVQPN IGPSFPVGPF ENSBTAP00000002161/1-1004 FLTNQRPEIQ PTTNKQSFSY TKIKSEPSSP RLASSPVQPN IGPSFPVGPF BACU013168/1-1076 FLTNQRPEIQ SATNKQSFSY TKIKSEPSSP RLASSPVQPN IGPSFPVGPF ENSTTRP00000003923/1-1148 FLTNQRPEIQ SATNKQSFSY TKIKSEPSSP RLASSPVQPN IGPSFPVGPF 501 550 bmy_00497T0/1-1129 LSQFAFPQDI TMVPQASEIL AKMSELVHRR LRHGSSSYPP VIYSPLMPKG ENSP00000384179/1-1151 LSQFSFPQDI TMVPQASEIL AKMSELVHRR LRHGSSSYPP VIYSPLMPKG ENSBTAP00000002161/1-1004 LSQFAFPQDI TMVPQASEIL AKMSELVHRR LRHGSSSYPP VIYSPLMPKG BACU013168/1-1076 LSQFAFPQDI TMVPQASEIL AKMSELVHRR LRHGSSSYPP VIYSPLMPKG ENSTTRP00000003923/1-1148 LSQFAFPQDI TMVPQASEIL AKMSELVHRR LRHGSSSYPP VIYSPLMPKG 551 600 bmy_00497T0/1-1129 ATCFECNITF NNLDNYLVHK KHYCSSRWQQ MAKSPEFPGV SEKMPEAVSP ENSP00000384179/1-1151 ATCFECNITF NNLDNYLVHK KHYCSSRWQQ MAKSPEFPSV SEKMPEALSP ENSBTAP00000002161/1-1004 ATCFECNITF NNLDNYLVHK KHYCSSRWQQ MAKSPEFPGV SEKMQEAVSP BACU013168/1-1076 ATCFECNITF NNLDNYLVHK KHYCSSRWQQ MAKSPEFPGV SEKMPEAVSP ENSTTRP00000003923/1-1148 ATCFECNITF NNLDNYLVHK KHYCSSRWQQ MAKSPEFPGV SEKMPEAVSP 601 650 bmy_00497T0/1-1129 NXGQTSINLL NPAVHSADTE NPLLQTPCIN SSTVLDLIGP NGKGHDKDFS ENSP00000384179/1-1151 NTGQTSINLL NPAAHSADPE NPLLQTSCIN SSTVLDLIGP NGKGHDKDFS ENSBTAP00000002161/1-1004 NTGQPSINLL NPAAHSADPE NPLLQTPCIN SSAVLDLIGP NGKGHDKDFS BACU013168/1-1076 NTGQTSINLL NPAAHSADAE NPLLQTPCIN SSTVLDLIGP NGKGHDKDFS ENSTTRP00000003923/1-1148 NTGQTSINLL NPAAHSADPE NPLLQTPCIN SSTVLDLIGP NGKGHDKDFS 651 700 bmy_00497T0/1-1129 IQAKKLSTPN SNDDKINGKP VDVKNPSLPL VDGESDPNKT TCEACNITFS ENSP00000384179/1-1151 TQTKKLSTSS NNDDKINGKP VDVKNPSVPL VDGESDPNKT TCEACNITFS ENSBTAP00000002161/1-1004 TQAKKLSTPN SNDDKINGKP VDVKNPSVPL VDGESDPNKT TCEACNITFS BACU013168/1-1076 IQAKKLSTPN SNDDKINGKP VDVKNPSLPL VDGESDPNKT TCEACNITFS ENSTTRP00000003923/1-1148 IQAKKLSTPN SNDDKINGKP VDVKNPSVPL VDGESDPNKT TCEACNITFS 701 750 bmy_00497T0/1-1129 RHETYMVHKQ YYCATRHDPP LKRSASNKVP AVQRTMRTRK RRKMYEMCLP ENSP00000384179/1-1151 RHETYMVHKQ YYCATRHDPP LKRSASNKVP AMQRTMRTRK RRKMYEMCLP ENSBTAP00000002161/1-1004 RHETYMVHKQ YYCATRHDPP LKRSASNKVP AMQRTMRTRK RRKMYEMCLP BACU013168/1-1076 RHETYMVHKQ YYCATRHDPP LKRSASNKMP AVQRTMRTRK RRKMYEMCLP ENSTTRP00000003923/1-1148 RHETYMVHKQ YYCATRHDPP LKRSASNKVP AVQRTMRTRK RRKMYEMCLP 751 800 bmy_00497T0/1-1129 EQEQRPPLVQ QRFLDVANLS SPCTSTQEPT EGLGECYHPR CDIFPGIVSK ENSP00000384179/1-1151 EQEQRPPLVQ QRFLDVANLN NPCTSTQEPT EGLGECYHPR CDIFPGIVSK ENSBTAP00000002161/1-1004 EQDQRPQLVQ QRFLDVANLS NPCTSTQEAT EGLGECYHPR CELFPGIVSK BACU013168/1-1076 EQEQRPPLVQ QRFLDVGNLS SPCTSTQEPT EGLGECYHPR CDIFPGIVSK ENSTTRP00000003923/1-1148 EQEQRPPLVQ QRFLDVANLS NPCTSTQEPT EGLGECYHPR CDIFPGIVSQ 801 850 bmy_00497T0/1-1129 HLETSLTINK CVPVSKCDTT HSSVSCLEMD VPIDLSKKCL SQSERTTASP ENSP00000384179/1-1151 HLETSLTINK CVPVSKCDTT HSSVSCLEMD VPIDLSKKCL SQSERTTTSP ENSBTAP00000002161/1-1004 HLETSLAMNK CVPVSKCDTA HSSVSCLEMD VPIDLSKKCL SQSERTTASP BACU013168/1-1076 HLETSLTINK CVPVSKCDTT HSSVSCLEMD VPIDLSKKCL SQSERTTASP ENSTTRP00000003923/1-1148 HLETSLTINK CVPVSKCDTT HSSVSCLEMD VPIDLSKKCL SQSERTTASP 851 900 bmy_00497T0/1-1129 KRLLDYHECT VCKISFNKVE NYLAHKQNFC PVTAHQRNDL APLDSKVFPN ENSP00000384179/1-1151 KRLLDYHECT VCKISFNKVE NYLAHKQNFC PVTAHQRNDL GQLDGKVFPN ENSBTAP00000002161/1-1004 KRLLDYHECT VCKISFNKVE NYLAHKQNFC PVTAHQRNDL APLDSKVFPN BACU013168/1-1076 KRLLDYHECT VCKISFNKVE NYLAHKQNFC PVTAHQRNDL APLDSKVFPN ENSTTRP00000003923/1-1148 KRLLDYHECT VCKISFNKVE NYLAHKQNFC PVTAHQRNDL APLDSKVFPN 901 950 bmy_00497T0/1-1129 PESERNSPDV SYERSIIKCE KNGNLKQPSP NGNLFSSHLA TLQGLKVFSE ENSP00000384179/1-1151 PESERNSPDV SYERSIIKCE KNGNLKQPSP NGNLFSSHLA TLQGLKVFSE ENSBTAP00000002161/1-1004 PESERSSPDV SYERSIIKCE KNGNLKQPSP NGNLFSSHLA TLQGLKVFSE BACU013168/1-1076 PESERNSPDA SYERSIIKCE KNGNLKQPSP NGNLFSSHLA TLQGLKVFSE ENSTTRP00000003923/1-1148 PESERNSPDV SYERSIIKCE KNGNLKQPSP NGNLFSSHLA TLQSLKVFSE 951 1000 bmy_00497T0/1-1129 AAQLIATKEE NKHLFLPQCL YPGAIKKAKG ADQLSPYYGI KPSDYISGSL ENSP00000384179/1-1151 AAQLIATKEE NRHLFLPQCL YPGAIKKAKG ADQLSPYYGI KPSDYISGSL ENSBTAP00000002161/1-1004 AAQLIATKEE NKHLFLPQCL YPGAIKKAKG ADQLSPYYGI KPSDYISGSL BACU013168/1-1076 AAQLIATKEE NKHLFLPQCL YPGAIKKAKG ADQLSPYYGI KPSDYISGSL ENSTTRP00000003923/1-1148 AAQLIATKEE NKHLFLPQCL YPGAIKKAKG ADQLSPYYGI KPSDYISGSL 1001 1050 bmy_00497T0/1-1129 VIHNADVDQS TNAENESPKS QASSNGCAVP KKDSLPLLPK NRGMVIVNGG ENSP00000384179/1-1151 VIHNTDIEQS RNAENESPKG QASSNGCAAL KKDSLPLLPK NRGMVIVNGG ENSBTAP00000002161/1-1004 VIHNADVEQS TNAENESPKS QASSNGCAVP KKDSLPLLPK NRGMVIVNGG BACU013168/1-1076 VIHNADVDQS TNAENESPKS QASSNGCAVP KKDSLPLLPK NRGMVIVNGG ENSTTRP00000003923/1-1148 VIHNADVDQS TNAENESPKS QASSNGCAVP KKDSLPLLPK NRGMVIVNGG 1051 1100 bmy_00497T0/1-1129 LKQDERPAAN PQQENIAQNP QHEDSRKSPS WISENPLAXN ENVSPGIPST ENSP00000384179/1-1151 LKQDERPAAN PQQENISQNP QHEDDHKSPS WISENPLAAN ENVSPGIPSA ENSBTAP00000002161/1-1004 LKQEERPAAN PQQENIAQNP QREDGHKSPS WVSENPLTTN ENVSPGIPSA BACU013168/1-1076 LKQDERPAAN PQQENIAQNP QHEDGRKSPS WISENPLATN ENVSPGIPST ENSTTRP00000003923/1-1148 LKQDERPAAN PQQENIAQNP QHEDSRKSPS WISENPLATN ENVSPGIPST 1101 1150 bmy_00497T0/1-1129 EDQLSSIAKG VNGSTQAPTS GKYCRLCDIQ FNNLSNFITH KKFYCSSHAA ENSP00000384179/1-1151 EEQLSSIAKG VNGSSQAPTS GKYCRLCDIQ FNNLSNFITH KKFYCSSHAA ENSBTAP00000002161/1-1004 EDQLSSIAKS VNGSTQAPTS GKYCRLCDIQ FNNLSNFITH KKFYCSSHAA BACU013168/1-1076 EDQLSSIAKG VNGSTQAPTS GKYCRLCDIQ FNNLSNFITH KKFYCSSHAA ENSTTRP00000003923/1-1148 EDQLSSIAKG VNGSTQAPTS GKYCRLCDIQ FNNLSNFITH KKFYCSSHAA 1151 1200 bmy_00497T0/1-1129 EHVK ENSP00000384179/1-1151 EHVK ENSBTAP00000002161/1-1004 EHVK BACU013168/1-1076 EHVK ENSTTRP00000003923/1-1148 EHVK