KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:16:51 2014  Check: 00 ..

 Name: ENSTTRP00000005791/1-142  Len:    142  Check:  7657  Weight:  1.00
 Name: ENSP00000361355/1-123     Len:    142  Check:  9919  Weight:  1.00
 Name: bmy_07041T0/1-85          Len:    142  Check:  2990  Weight:  1.00
 Name: ENSBTAP00000002166/1-124  Len:    142  Check:  3497  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000005791/1-142  NAPPHDSVSR SFKMVVAKAN AGGAATSCFR TAKPLPSLVT VLGLGYFGWV 
ENSP00000361355/1-123     ---------- -------MAT AAG-AT-YFQ RGSLFWFTVI TLSFGYYTWV 
bmy_07041T0/1-85          ---------- -------MGK AGGDET-YFQ RSSLFWVTVI ILSFGYYTWM 
ENSBTAP00000002166/1-124  ---------- -------MGK ARGDEA-YFQ RSSLFWVTII ILSFGYYTWV 


                          51                                                 100
ENSTTRP00000005791/1-142  VFWPEAIPYQ SLGPLGPFTQ YLLEHHHTLL HSWYWLAWLI HVGESLYAIV 
ENSP00000361355/1-123     VFWPQSIPYQ NLGPLGPFTQ YLVDHHHTLL CNGYWLAWLI HVGESLYAIV 
bmy_07041T0/1-85          IFWPETIPYQ SLGPLGPFTQ YLLDHHHTLV HSWYWLAWLI HVGESLYAIV 
ENSBTAP00000002166/1-124  IFWPESIPYQ SLGPLGPFTQ YLLKHHHTLV HAWYWLAWMI HVGESLYAIV 


                          101                                                150
ENSTTRP00000005791/1-142  LCKSKGITNS WTQLLWFLQT FLFGMASLYY LIDYRPRRHK QT 
ENSP00000361355/1-123     LCKHKGITSG RAQLLWFLQT FFFGIASLTI LIAYKRKRQK QT 
bmy_07041T0/1-85          LCK------- ---------- ---------- ---------- -- 
ENSBTAP00000002166/1-124  LCKSKGITNT WTQLLWFLQT FLFGLASLYY LIAFRPKHQK QT