KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:53 2014 Check: 00 .. Name: ENSP00000288022/1-243 Len: 250 Check: 7394 Weight: 1.00 Name: ENSBTAP00000002176/1-230 Len: 250 Check: 9543 Weight: 1.00 Name: bmy_05320T0/1-250 Len: 250 Check: 9037 Weight: 1.00 Name: ENSTTRP00000009484/1-244 Len: 250 Check: 8723 Weight: 1.00 Name: BACU018141/1-99 Len: 250 Check: 7755 Weight: 1.00 // 1 50 ENSP00000288022/1-243 MARLWGALSL WPLWA----- -AVPWGGAAA V-GVRACSST AAPDGVEGPA ENSBTAP00000002176/1-230 ---------- ---------- SALLWGERVA VGGARAYSST PTQDGLEGPA bmy_05320T0/1-250 MVQLGAGLLL RWLLARGCVG PALQWGERVA GGGARAYSST PPPDGLEGPA ENSTTRP00000009484/1-244 MGQLGAGLLL RWLRA----- -ALQWGERVA GGGARACSSR HPPDGLEGPA BACU018141/1-99 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000288022/1-243 LRRSYWRHLR RLVLGPPEPP FSHVCQVGDP VLRGVAAPVE RAQLGGPELQ ENSBTAP00000002176/1-230 RRRSYWRYVR RLVQGTPEPP YPRVCQVGDP ALRAVAAPVE PAQLAGPELQ bmy_05320T0/1-250 RRRSYWRYVR RLVQGAPEPP YPRVCQVGDP ALRAVAAPVE PTQLAGPELQ ENSTTRP00000009484/1-244 RRRSYWRYVR RLVQGAPEPP YPRVCQVGDP ALRAVAVPVE AAQLAGPELQ BACU018141/1-99 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000288022/1-243 RLTQRLVQVM RRRRCVGLSA PQLGVPRQVL ALELPEALCR ECPPRQRALR ENSBTAP00000002176/1-230 RLVERLVQVM RRRHCVGLSA PQLGVPLQVL ALEFPETLFR ACAPRVREAR bmy_05320T0/1-250 RLVQRLVQVM RRRRCVGLSA PQLGVPLQVL ALEFPEALFR ACAPRVREAR ENSTTRP00000009484/1-244 QLVQRLVQVM RRRRCVGLSA PQLGVPLQVL AVEFPEALFH ACAPRVREAR BACU018141/1-99 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000288022/1-243 QMEPFPLRVF VNPSLRVLDS RLVTFPEGCE SVAGFLACVP RFQAVQISGL ENSBTAP00000002176/1-230 QMEPFPLRVF VNPSLRVLDS RLVTFPEGCE SVAGFLACVP RFQAVQISGL bmy_05320T0/1-250 QIETFPLRVF VNPSLRVLDS RRVTFPEGCE SVSGFLACVP RFQAVQISGM ENSTTRP00000009484/1-244 QMETFPLRVF VNPSLRVLDS RLVTFPEGCE SISGFLACVP RFQAVQISGM BACU018141/1-99 -METFPLRVF VNPSLRVLDS CLVTFPEGCE SVSGFLACVP RFQAVQISGM 201 250 ENSP00000288022/1-243 DPNGEQVVWQ ASGWAARIIQ HEMDHLQGCL FIDKMDSRTF TNVYWMKVND ENSBTAP00000002176/1-230 DPRGEQVVWQ ASGWAARIIQ HEMDHLQGCL FIDKMDSKTF TNIHWMEVND bmy_05320T0/1-250 DPGGEQVVWQ ASGWAARIIQ HEMDHLQGCL FIDKMDSKTF TNIHWMEVND ENSTTRP00000009484/1-244 DPGGEQVVWQ ASGWAARIIQ HEMDHLQGCL FIDKMDSKTF TNIHWMEVND BACU018141/1-99 DPRGEQVVWQ ASGWAARIIQ HEMDHLQGCL FIDKMDSKTF TNIHWMEVND