KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:55 2014 Check: 00 .. Name: ENSP00000374280/1-710 Len: 735 Check: 4613 Weight: 1.00 Name: ENSBTAP00000002191/1-714 Len: 735 Check: 4401 Weight: 1.00 Name: bmy_09160T0/1-691 Len: 735 Check: 1014 Weight: 1.00 Name: ENSTTRP00000002618/1-710 Len: 735 Check: 5623 Weight: 1.00 Name: BACU008509/1-678 Len: 735 Check: 3770 Weight: 1.00 // 1 50 ENSP00000374280/1-710 MRGRLCVGRA AAAA----AA VAVPLAGGQE GSPGGGRRGS RGTTMVKKRK ENSBTAP00000002191/1-714 MRGRLCVGRT AAAAAAATAA VAVPLAGGQE GSPGGVRRGS RGTTMVKKRK bmy_09160T0/1-691 ---------- ---------- ---------- ---------- ----MVKKRK ENSTTRP00000002618/1-710 MRGRLCVGRA AAAA----AA VAVPLAGGQE GSPGGVRRGS RGTTMVKKRK BACU008509/1-678 MRGRLCVGRA AAAA----AA VAVPLAGGQE GSPGGVRRGS RGTTMVKKRK 51 100 ENSP00000374280/1-710 GRVVIDSDTE DSGSDENLDQ ELLSLAKRKR SDSEEKEPPV SQPAASSDSE ENSBTAP00000002191/1-714 GRVVIDSDTE DSGSDENLDQ ELLSLAKRKR SDSEEKEPPV SQPAASSDSE bmy_09160T0/1-691 GRVVIDSDTE DSGSDENLDQ ELLSLAKRKR SDSEEKEPPV SQPAASSDSE ENSTTRP00000002618/1-710 GRVVIDSDTE DSGSDENLDQ ELLSLAKRKR SDSEEKEPPV SQPAASSDSE BACU008509/1-678 GRVVIDSDTE DSGSDENLDQ ELLSLAKRKR SDSEEKEPPV SQPAASSDSE 101 150 ENSP00000374280/1-710 TSDSDDEWTF GSNKNKKKGK ARKIEKKGTM KKQANKTASS GSSDKDSSAE ENSBTAP00000002191/1-714 TSNSDDEWTF GSNKNKKKGK ARKIEKKGTM KKQANKTASS GSSDKDSSAE bmy_09160T0/1-691 TSNSDDEWTF GSNKNKKKGK ARKIEKKGTM KKQANKTASS GSSDKDSSAE ENSTTRP00000002618/1-710 TSNSDDEWTF GSNKNKKKGK ARKIEKKGTM KKQANKTASS GSSDKDSSAE BACU008509/1-678 TSNSDDEWTF GSNKNKKKGK ARKIEKKGTM KKQANKTASS GSSDKDSSAE 151 200 ENSP00000374280/1-710 SSAPEEGEVS DSDSNSSSSS SDSDSSSEDE EFHDGYGEDL MGDEEDRARL ENSBTAP00000002191/1-714 SSAPEEGEVS DSDSNSSSSS SDSDSSSEDE EFHDGYGEDL MGDEEDRARL bmy_09160T0/1-691 SSAPEEGEVS DSDSNSSSSS SDSDSSSEDE EFHDGYGEDL MGDEEDRARL ENSTTRP00000002618/1-710 SSAPEEGEVS DSDSNSSSSS SDSDSSSEDE EFHDGYGEDL MGDEEDRARL BACU008509/1-678 SSAPEEGEVS DSDSNSSSSS SDSDSSSEDE EFHDGYGEDL MGDEEDRARL 201 250 ENSP00000374280/1-710 EQMTEKEREQ ELFNRIEKRE VLKRRFEIKK KLKTAKKKEK KEKKKKQEEE ENSBTAP00000002191/1-714 EQMTEKEREQ ELFNRIEKRE VLKKRFEIRK KLKTAKKKEK KEKKKKQEEE bmy_09160T0/1-691 EQMTEKEREQ ELFNRIEKRE VLKKRFEIRK KLKTAKKKEK KEKKKKQEEE ENSTTRP00000002618/1-710 EQMTEKEREQ ELFNRIEKRE VLKKRFEIRK KLKTAKKKEK KEKKKKQEEE BACU008509/1-678 EQMTEKEREQ ELFNRIEKRE VLKKRFEIRK KLKTAKKKEK KEKKKKQEEE 251 300 ENSP00000374280/1-710 QEKKKLTQIQ ESQVTSHNKE RRSKRDEKLD KKSQAMEELK AEREKRKNRT ENSBTAP00000002191/1-714 QEKKKLTQIQ ESQVTSHNKE RRSKRDEKLD KKSQAMEELK AEREKRKNRT bmy_09160T0/1-691 QEKKKLTQIQ ESQVTSHNKE RRSKRDEKLD KKSQAMEELK AEREKRKNRT ENSTTRP00000002618/1-710 QEKKKLTQIQ ESQVTSHNKE RRSKRDEKLD KKSQAMEELK AEREKRKNRT BACU008509/1-678 QEKKKLTQIQ ESQVTSHNKE RRSKRDEKLD KKSQAMEELK AEREKRKNRT 301 350 ENSP00000374280/1-710 AELLAKKQPL KTSEVYSDDE EEEEDDKSSE KSDRSSRTSS SDEEEEKEEI ENSBTAP00000002191/1-714 AELLAKKQPL KTSEVYSDDE EEEEDDKSSE KSDRSSRTTS SDEEEEKEEI bmy_09160T0/1-691 AELLAKKQPL KTSEVYSDDE EEEEDDKSSE KSDRSSRTSS SDEEEEKEEI ENSTTRP00000002618/1-710 AELLAKKQPL KTSEVYSDDE EEEEDDKSSE KSDRSSRTSS SDEEEEKEEI BACU008509/1-678 AELLAKKQPL KTSEVYSDDE EEEEDDKSSE KSDRSSRTSS SDEEEEKEEI 351 400 ENSP00000374280/1-710 PPKSQPVSLP EELNRVRLSR HKLERWCHMP FFAKTVTGCF VRIGIGNHNS ENSBTAP00000002191/1-714 PPKSQPVSLP EELNRVRLSR HKLERWCHMP FFAKTVTGCF VRIGIGNHNS bmy_09160T0/1-691 PPKSQPVSLP EELNRVRLSR HKLERWCHMP FFAKTVTGCF VRIGIGNHNS ENSTTRP00000002618/1-710 PPKSQPVSLP EELNRVRLSR HKLERWCHMP FFAKTVTGCF VRIGIGNHNS BACU008509/1-678 PPKSQPVSLP EELNRVRLSR HKLERWCHMP FFAKTVTGCF VRIGIGNHNS 401 450 ENSP00000374280/1-710 KPVYRVAEIT GVVETAKVYQ LGGTRTNKGL QLRHGNDQRV FRLEFVSNQE ENSBTAP00000002191/1-714 KPVYRVAEIT GVVETAKVYQ LGGTRTNKGL QLRHGSDQRV FRLEFVSNQE bmy_09160T0/1-691 KPVYRVAEIT GVVETAKVYQ LGGTRTNKGL QLRHGSDQRV FRLEFVSNQE ENSTTRP00000002618/1-710 KPVYRVAEIT GVVETAKVYQ LGGTRTNKGL QLRHGSDQRV FRLEFVSNQE BACU008509/1-678 KPVYRVAEIT GVVETAKVYQ LGGTRTNKGL QLRHGSDQRV FRLEFVSNQE 451 500 ENSP00000374280/1-710 FTESEFMKWK EAMFSAGMQL PTLDEINKKE LSIKEALNYK FNDQDIEEIV ENSBTAP00000002191/1-714 FTESEFMKWK EAMFSAGMQL PTLDEINKKE LSIKEALNYK FNDQDIEEIV bmy_09160T0/1-691 FTESEFMKWK EAMFSAGMQL PTLDEINKKE LSIKEALNYK FNDQDIEEIV ENSTTRP00000002618/1-710 FTESEFMKWK EAMFSAGMQL PTLDEINKKE LSIKEALNYK FNDQDIEEIV BACU008509/1-678 FTESEFMKWK EAMFSAGMQL PTLDEINKKE LSIKEALNYK FNDQDIEEIV 501 550 ENSP00000374280/1-710 KEKERFRKAP PNYAMKKTQL LKEKAMAEDL GDQDKAKQIQ DQLNELEERA ENSBTAP00000002191/1-714 KEKERFRKAP PNYAMKKTQL LKEKAMAEDL GDQDKAKQIQ DQLNELEERA bmy_09160T0/1-691 KEKERFRKAP PNYAMKKTQL LKEKAMAEDL GDQDKAKQIQ DQLNELEERA ENSTTRP00000002618/1-710 KEKERFRKAP PNYAMKKTQL LKEKAMAEDL GDQDKAKQIQ DQLNELEERA BACU008509/1-678 KEKERFRKAP PNYAMKKTQL LKEKAMAEDL GDQDKAKQIQ DQLNELEERA 551 600 ENSP00000374280/1-710 EALDRQRTKN ISAISYINQR NREWNIVESE KALVAESHNM KNQQMDPFTR ENSBTAP00000002191/1-714 EALDRQRTKN ISAISYINQR NREWNIVESE KALVAESHNM KNQQMDPFTR bmy_09160T0/1-691 EALDRQRTKN ISAISYINQR NREWNIVESE KALVAESHNM KNQQMDPFTR ENSTTRP00000002618/1-710 EALDRQRTKN ISAISYINQR NREWNIVESE KALVAESHNM KIQQMDPFTR BACU008509/1-678 EALDRQRTKN ISAISYINQR NREWNIVESE KALVAESHNM KNQQMDPFTR 601 650 ENSP00000374280/1-710 RQCKPTIVSN SRDPAVQAAI LAQLNAKYGS GVLPDAPKEM SK-------- ENSBTAP00000002191/1-714 RQCKPTIVSN SRDPAVQAAI LAQLNAKYGS GVLPDAPKEM NK-------- bmy_09160T0/1-691 RQCKPTIVSN SRDPAVQAAI LAQLNAKYGS GVLPDAPKEM SKASILLELG ENSTTRP00000002618/1-710 RQCKPTIVSN SRDPAVQAAI LAQLNAKYGS GVLPDAPKEM SK-------- BACU008509/1-678 RQCKPTIVSN ---------- ---------- ---------- ---------- 651 700 ENSP00000374280/1-710 ---------- ---GQGKDKD LNSKSASDLS EDLFKVHDFD VKIDLQVPSS ENSBTAP00000002191/1-714 ---------- ---GQGKDKD LNSKSASDLS EDLFKVHDFD VKIDLQVPSS bmy_09160T0/1-691 RWPGHQSRHF LGRGQGKDKD LNSKSASDLS EDLFKVHDFD VKIDLQVPSS ENSTTRP00000002618/1-710 ---------- ---GQGKDKD LNSKSASDLS EDLFKVHDFD VKIDLQVPSS BACU008509/1-678 ---------- ---GQGKDKD LNSKSASDLS EDLFKVHDFD VKIDLQVPSS 701 750 ENSP00000374280/1-710 ESKALAITSK APPAKDGAPR RSLNLEDYKK RRGLI ENSBTAP00000002191/1-714 ESKALAITSK APPAKDGAPR RSLNLEDYKK RRGLI bmy_09160T0/1-691 ESKALAITSK APPAKDGAPR RSLNLEDYKK RRGLI ENSTTRP00000002618/1-710 ESKALAITSK APPAKDGAPR RSLNLEDYKK RRGLI BACU008509/1-678 ESKALAITSK APPAKDGAPR RSLNLEDYKK RRGLI