KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:57 2014 Check: 00 .. Name: ENSP00000304108/1-826 Len: 839 Check: 193 Weight: 1.00 Name: ENSBTAP00000002209/1-752 Len: 839 Check: 8351 Weight: 1.00 Name: bmy_08717T0/1-833 Len: 839 Check: 2408 Weight: 1.00 Name: ENSTTRP00000011850/1-825 Len: 839 Check: 5492 Weight: 1.00 Name: BACU019950/1-746 Len: 839 Check: 9862 Weight: 1.00 // 1 50 ENSP00000304108/1-826 MARLCRRVPC TLLLGLAVVL LKARLVPAAA RAELSRSDLS LIQQQQQQQQ ENSBTAP00000002209/1-752 ---------- ---------- ---------- ---------- ---------- bmy_08717T0/1-833 MARLSRRVPC TLLLGLAAVL LKARLVPAAA RAELSRSDLS LIQQQQQQQQ ENSTTRP00000011850/1-825 MARL-RRVPC TLLLGLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019950/1-746 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000304108/1-826 QQQQQQKQLE EAEEERTEVP GATSTLT--- ---------V PVSVFMLKVQ ENSBTAP00000002209/1-752 ---------- ---------- -----LS--- ---------F LVSVFMLKVQ bmy_08717T0/1-833 QRQR-----E EAEEERPEVP GASSTVTAPG YNVLRFSFSL PVSVFMLKVQ ENSTTRP00000011850/1-825 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---------X XXSVFMLKVQ BACU019950/1-746 ---------- ---------- ---------- ---------- --SVFMLKVQ 101 150 ENSP00000304108/1-826 VNDIISRQYL SQAVVEVFVN YTKTNSTVTK SNGAVLIKVP YKLGLSLTII ENSBTAP00000002209/1-752 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLISVP YKLGLSLTII bmy_08717T0/1-833 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLIRVP YKLGLSLTII ENSTTRP00000011850/1-825 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLIRVP YKLGLSLTII BACU019950/1-746 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLIRVP YKLGLSLTII 151 200 ENSP00000304108/1-826 AYKDGYVLTP LPWKTRRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA ENSBTAP00000002209/1-752 AYKDGYVLTP LPWKTRRMPI YSSVTLSLFP QNQANIWLFE DTILITGKLA bmy_08717T0/1-833 AYKDGYVLTP LPWKTGRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA ENSTTRP00000011850/1-825 AYKDGYVLTP LPWKTGRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA BACU019950/1-746 AYKDGYVLTP LPWKTGRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA 201 250 ENSP00000304108/1-826 DAKSQPSVQF SKALIKLPDN HHISNVTGYL TVLQQFLKVD NFLHTTGITL ENSBTAP00000002209/1-752 DAKSQPSVQF SKALIKLPNN HHISNVTGYL TVLQQFLKVD NFLYTTGITL bmy_08717T0/1-833 DAKSQPSVQF SKALIRLPNS HHISNVTGYL TVLQQFLKVD NFLYTSGITL ENSTTRP00000011850/1-825 DAKSQPSVQF SKALIRLPNS HHISNVTGYL TVLQQFLKVD NFLYTTGITL BACU019950/1-746 DAKSQPSVQF SKALIRLPNS HHISNVTGYL TVLQQFLKVD NFLYTTGITL 251 300 ENSP00000304108/1-826 NKPGFENIEL TPLAAICVKI YSGGKELKVN GSIQVSLPLL RLNDISAGDR ENSBTAP00000002209/1-752 NKSGFESIEL TPLAAICVKI YSGGKELKVD GSIQISLPLL HTNDVSAGDH bmy_08717T0/1-833 NKSGFEGNEL TPLAAICVKI YSGGKELKVD GSIQISLPLL RTNGXSAGDH ENSTTRP00000011850/1-825 NKSGFEGNEL TPLAAICVKI YSGGKELKVD GSIQISLPLL RTNGISAGDH BACU019950/1-746 NKSGFEGNEL TPLAAICVKI YSGGKELKVD GSIQISLPLL RTKGISAGDN 301 350 ENSP00000304108/1-826 IPAWTFDMNT GAWVNHGRGM VKEHNNHLIW TYDAPHLGYW IAAPLPGTRG ENSBTAP00000002209/1-752 VPAWTFDMNT GAWVNHGQGM VKEYNSHLIW TYDAPHLGYW IAAPLPGTRG bmy_08717T0/1-833 IPAWTFDMNT GAWVNHGRGM VKEYNNHLIW TYEAPHLGYW IAAPLPGTRG ENSTTRP00000011850/1-825 IPAWTFDMNT GAWVNHGRGM VKEYNNHLIW TYEAPHLGYW IAAPLPGTRG BACU019950/1-746 IPAWTFDMNT GAWINHGRGM VKEYNNHLIW TYEAPHLGYW IAAPLPGTRG 351 400 ENSP00000304108/1-826 SGINEDSKDI TAYHTVFLTA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR ENSBTAP00000002209/1-752 SGMNGDSKDI TAYHTVFLTA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR bmy_08717T0/1-833 SGINGDSKDI TAYHTVFLSA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR ENSTTRP00000011850/1-825 SGINGDSKDI TAYHTVFLSA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR BACU019950/1-746 SGINGDSKDI TAYHTVFLSA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR 401 450 ENSP00000304108/1-826 ERNITKLEVL KRDQTTSTTH INHISTVKVA LKAEDKSQLF NAKNSSYSPQ ENSBTAP00000002209/1-752 ERNTTKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF NAKSSSYSPQ bmy_08717T0/1-833 ERNITKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF SAKSSSYNPQ ENSTTRP00000011850/1-825 ERNITKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF SAKSSSYNPQ BACU019950/1-746 ERNITKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF SAKSSSYNPQ 451 500 ENSP00000304108/1-826 KKEPSKAETE ERVSMVKTRD DFKIYNEDVS FLSVNQNNYS RNPTQSLEPN ENSBTAP00000002209/1-752 KKESSKVEAE ERVSMVKTRD NLKIYNEDVS FLSVNQNNYS RNPAQSLEPN bmy_08717T0/1-833 KKEPSKVEAE ERVSMVKTRD GLKIYNEDVS FLSVNQNHYS RNPAQSLEPN ENSTTRP00000011850/1-825 KKEPSKVEAE ERVSMVKTRD SLKIYNEDVS FLSVNQNNYS RNPAQSLEPN BACU019950/1-746 KKEPSKVEAE ERVSMVKTRD SLKIYNEDVS FLSVNQNHYS RNPAQSLEPN 501 550 ENSP00000304108/1-826 VGSKQPKHIN NNLSSSLGDA QDEKRYLTGN EEAYGRSHIP EQLMHIYSQP ENSBTAP00000002209/1-752 VGSKQLKHVN NNMSSSLGDT QEEKRYLTGN EEAYGHPHVP EQIMHIYSQP bmy_08717T0/1-833 VGSKQPKHIN NNISSSLGDA QEEKRYLTGN EDVYGHSHIP EQLMHIYSQP ENSTTRP00000011850/1-825 VGSKQPKHIN NNISSSLGDA QEEKRYLTGS EDVYGHSHIP EQLMHIYSQP BACU019950/1-746 VGSKQPKHIN NNISSSLGDA QEEKRYLTGN EDVYGHSHIP EQLMHIYSQP 551 600 ENSP00000304108/1-826 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK ENSBTAP00000002209/1-752 IAILQTSDLF PTPEQLHPAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK bmy_08717T0/1-833 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK ENSTTRP00000011850/1-825 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK BACU019950/1-746 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK 601 650 ENSP00000304108/1-826 MPIHSHAQPP DAREEDIILE GQQSLPSQAS DWSRYSSSLL ESVSVPGTLN ENSBTAP00000002209/1-752 MPMHSHAQPP DAREENFPLE GQQSLPSQTS DWSRYSNSLL ESVSVPGTLN bmy_08717T0/1-833 MPMHSHVQPP DXREENIPLE GQQSLPSQTS DWSRYSNSLL ESVSVPGTLN ENSTTRP00000011850/1-825 MPMHSHVQPP DAREENIPLE GQQSLPSQTA DWSRYSNSLL ESVSVPGTLN BACU019950/1-746 MPIHSHVQPP DAREENIPLE GQQSLPSQTS DWSRYSNSLL ESVSVPGTLN 651 700 ENSP00000304108/1-826 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS ENSBTAP00000002209/1-752 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS bmy_08717T0/1-833 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS ENSTTRP00000011850/1-825 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS BACU019950/1-746 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS 701 750 ENSP00000304108/1-826 FIDLKKGKRT QSNDTSLDSG VDMNELHSSR KLEREKTFIK SMHQPKILYL ENSBTAP00000002209/1-752 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL bmy_08717T0/1-833 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL ENSTTRP00000011850/1-825 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL BACU019950/1-746 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL 751 800 ENSP00000304108/1-826 EDLDLSSSES GTTVCSPEDP ALRHILDGGS GVIMEHPGEE SPGRKSTVED ENSBTAP00000002209/1-752 EDLDLSSSES GTTVCSPEDP ALRHILDGGS GAIMEHPGEE SPGRKSTAED bmy_08717T0/1-833 EDLDLSSSES GTTVCSPEDP ALRHFLDGGS GAIMEHPGEE SPGRKSTVED ENSTTRP00000011850/1-825 EDLDLSSSES GTTVCSPEDP ALRHFLDGGS GAIMEHPGEE SPGRKSTVED BACU019950/1-746 EDLDLSSSES GTTVCSPEDP ALRHFLDGGS GAIMEHPGEE SPGRKSTVED 801 850 ENSP00000304108/1-826 FEANTSPTKR RGR-PPLAKR DSKTNIWKKR EERPLIPIN ENSBTAP00000002209/1-752 FEANISPTKK RGRPPPLAKR DSKTNIWKKR EERPLIPIN bmy_08717T0/1-833 FEANISPTKK RGR-PPLVKK DSKTNIWKKR EERPLIPIN ENSTTRP00000011850/1-825 FEANISPTKK RGR-PPLVKK DSKTNIWKKR EERPLIPIN BACU019950/1-746 FEANISPTKK RGR-PPLVKK DSKTNIWKKR EERPLIPIN