KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:16:57 2014 Check: 00 ..
Name: ENSP00000304108/1-826 Len: 839 Check: 193 Weight: 1.00
Name: ENSBTAP00000002209/1-752 Len: 839 Check: 8351 Weight: 1.00
Name: bmy_08717T0/1-833 Len: 839 Check: 2408 Weight: 1.00
Name: ENSTTRP00000011850/1-825 Len: 839 Check: 5492 Weight: 1.00
Name: BACU019950/1-746 Len: 839 Check: 9862 Weight: 1.00
//
1 50
ENSP00000304108/1-826 MARLCRRVPC TLLLGLAVVL LKARLVPAAA RAELSRSDLS LIQQQQQQQQ
ENSBTAP00000002209/1-752 ---------- ---------- ---------- ---------- ----------
bmy_08717T0/1-833 MARLSRRVPC TLLLGLAAVL LKARLVPAAA RAELSRSDLS LIQQQQQQQQ
ENSTTRP00000011850/1-825 MARL-RRVPC TLLLGLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
BACU019950/1-746 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000304108/1-826 QQQQQQKQLE EAEEERTEVP GATSTLT--- ---------V PVSVFMLKVQ
ENSBTAP00000002209/1-752 ---------- ---------- -----LS--- ---------F LVSVFMLKVQ
bmy_08717T0/1-833 QRQR-----E EAEEERPEVP GASSTVTAPG YNVLRFSFSL PVSVFMLKVQ
ENSTTRP00000011850/1-825 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---------X XXSVFMLKVQ
BACU019950/1-746 ---------- ---------- ---------- ---------- --SVFMLKVQ
101 150
ENSP00000304108/1-826 VNDIISRQYL SQAVVEVFVN YTKTNSTVTK SNGAVLIKVP YKLGLSLTII
ENSBTAP00000002209/1-752 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLISVP YKLGLSLTII
bmy_08717T0/1-833 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLIRVP YKLGLSLTII
ENSTTRP00000011850/1-825 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLIRVP YKLGLSLTII
BACU019950/1-746 VNDIISRQYL SQAVVEVFVN YTKTNSTVTR NNGAVLIRVP YKLGLSLTII
151 200
ENSP00000304108/1-826 AYKDGYVLTP LPWKTRRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA
ENSBTAP00000002209/1-752 AYKDGYVLTP LPWKTRRMPI YSSVTLSLFP QNQANIWLFE DTILITGKLA
bmy_08717T0/1-833 AYKDGYVLTP LPWKTGRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA
ENSTTRP00000011850/1-825 AYKDGYVLTP LPWKTGRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA
BACU019950/1-746 AYKDGYVLTP LPWKTGRMPI YSSVTLSLFP QSQANIWLFE DTVLITGKLA
201 250
ENSP00000304108/1-826 DAKSQPSVQF SKALIKLPDN HHISNVTGYL TVLQQFLKVD NFLHTTGITL
ENSBTAP00000002209/1-752 DAKSQPSVQF SKALIKLPNN HHISNVTGYL TVLQQFLKVD NFLYTTGITL
bmy_08717T0/1-833 DAKSQPSVQF SKALIRLPNS HHISNVTGYL TVLQQFLKVD NFLYTSGITL
ENSTTRP00000011850/1-825 DAKSQPSVQF SKALIRLPNS HHISNVTGYL TVLQQFLKVD NFLYTTGITL
BACU019950/1-746 DAKSQPSVQF SKALIRLPNS HHISNVTGYL TVLQQFLKVD NFLYTTGITL
251 300
ENSP00000304108/1-826 NKPGFENIEL TPLAAICVKI YSGGKELKVN GSIQVSLPLL RLNDISAGDR
ENSBTAP00000002209/1-752 NKSGFESIEL TPLAAICVKI YSGGKELKVD GSIQISLPLL HTNDVSAGDH
bmy_08717T0/1-833 NKSGFEGNEL TPLAAICVKI YSGGKELKVD GSIQISLPLL RTNGXSAGDH
ENSTTRP00000011850/1-825 NKSGFEGNEL TPLAAICVKI YSGGKELKVD GSIQISLPLL RTNGISAGDH
BACU019950/1-746 NKSGFEGNEL TPLAAICVKI YSGGKELKVD GSIQISLPLL RTKGISAGDN
301 350
ENSP00000304108/1-826 IPAWTFDMNT GAWVNHGRGM VKEHNNHLIW TYDAPHLGYW IAAPLPGTRG
ENSBTAP00000002209/1-752 VPAWTFDMNT GAWVNHGQGM VKEYNSHLIW TYDAPHLGYW IAAPLPGTRG
bmy_08717T0/1-833 IPAWTFDMNT GAWVNHGRGM VKEYNNHLIW TYEAPHLGYW IAAPLPGTRG
ENSTTRP00000011850/1-825 IPAWTFDMNT GAWVNHGRGM VKEYNNHLIW TYEAPHLGYW IAAPLPGTRG
BACU019950/1-746 IPAWTFDMNT GAWINHGRGM VKEYNNHLIW TYEAPHLGYW IAAPLPGTRG
351 400
ENSP00000304108/1-826 SGINEDSKDI TAYHTVFLTA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR
ENSBTAP00000002209/1-752 SGMNGDSKDI TAYHTVFLTA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR
bmy_08717T0/1-833 SGINGDSKDI TAYHTVFLSA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR
ENSTTRP00000011850/1-825 SGINGDSKDI TAYHTVFLSA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR
BACU019950/1-746 SGINGDSKDI TAYHTVFLSA ILGGTIVIVI GFFAVLLCYC RDKCGTPQKR
401 450
ENSP00000304108/1-826 ERNITKLEVL KRDQTTSTTH INHISTVKVA LKAEDKSQLF NAKNSSYSPQ
ENSBTAP00000002209/1-752 ERNTTKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF NAKSSSYSPQ
bmy_08717T0/1-833 ERNITKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF SAKSSSYNPQ
ENSTTRP00000011850/1-825 ERNITKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF SAKSSSYNPQ
BACU019950/1-746 ERNITKLEVL KRDQTTSTTH INHISSVKVA LKTEDKSQLF SAKSSSYNPQ
451 500
ENSP00000304108/1-826 KKEPSKAETE ERVSMVKTRD DFKIYNEDVS FLSVNQNNYS RNPTQSLEPN
ENSBTAP00000002209/1-752 KKESSKVEAE ERVSMVKTRD NLKIYNEDVS FLSVNQNNYS RNPAQSLEPN
bmy_08717T0/1-833 KKEPSKVEAE ERVSMVKTRD GLKIYNEDVS FLSVNQNHYS RNPAQSLEPN
ENSTTRP00000011850/1-825 KKEPSKVEAE ERVSMVKTRD SLKIYNEDVS FLSVNQNNYS RNPAQSLEPN
BACU019950/1-746 KKEPSKVEAE ERVSMVKTRD SLKIYNEDVS FLSVNQNHYS RNPAQSLEPN
501 550
ENSP00000304108/1-826 VGSKQPKHIN NNLSSSLGDA QDEKRYLTGN EEAYGRSHIP EQLMHIYSQP
ENSBTAP00000002209/1-752 VGSKQLKHVN NNMSSSLGDT QEEKRYLTGN EEAYGHPHVP EQIMHIYSQP
bmy_08717T0/1-833 VGSKQPKHIN NNISSSLGDA QEEKRYLTGN EDVYGHSHIP EQLMHIYSQP
ENSTTRP00000011850/1-825 VGSKQPKHIN NNISSSLGDA QEEKRYLTGS EDVYGHSHIP EQLMHIYSQP
BACU019950/1-746 VGSKQPKHIN NNISSSLGDA QEEKRYLTGN EDVYGHSHIP EQLMHIYSQP
551 600
ENSP00000304108/1-826 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK
ENSBTAP00000002209/1-752 IAILQTSDLF PTPEQLHPAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK
bmy_08717T0/1-833 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK
ENSTTRP00000011850/1-825 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK
BACU019950/1-746 IAILQTSDLF STPEQLHTAK SATLPRKGQL VYGQLMEPVN RENFTQTLPK
601 650
ENSP00000304108/1-826 MPIHSHAQPP DAREEDIILE GQQSLPSQAS DWSRYSSSLL ESVSVPGTLN
ENSBTAP00000002209/1-752 MPMHSHAQPP DAREENFPLE GQQSLPSQTS DWSRYSNSLL ESVSVPGTLN
bmy_08717T0/1-833 MPMHSHVQPP DXREENIPLE GQQSLPSQTS DWSRYSNSLL ESVSVPGTLN
ENSTTRP00000011850/1-825 MPMHSHVQPP DAREENIPLE GQQSLPSQTA DWSRYSNSLL ESVSVPGTLN
BACU019950/1-746 MPIHSHVQPP DAREENIPLE GQQSLPSQTS DWSRYSNSLL ESVSVPGTLN
651 700
ENSP00000304108/1-826 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS
ENSBTAP00000002209/1-752 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS
bmy_08717T0/1-833 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS
ENSTTRP00000011850/1-825 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS
BACU019950/1-746 EAVVMTPFSS ELQGISEQTL LELSKGKPSP HPRAWFVSLD GKPVAQVRHS
701 750
ENSP00000304108/1-826 FIDLKKGKRT QSNDTSLDSG VDMNELHSSR KLEREKTFIK SMHQPKILYL
ENSBTAP00000002209/1-752 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL
bmy_08717T0/1-833 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL
ENSTTRP00000011850/1-825 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL
BACU019950/1-746 FIDLKKGKRA QSNDTSLDSG VDMNEHHSSR KLEREKTFIK SMHQPKILYL
751 800
ENSP00000304108/1-826 EDLDLSSSES GTTVCSPEDP ALRHILDGGS GVIMEHPGEE SPGRKSTVED
ENSBTAP00000002209/1-752 EDLDLSSSES GTTVCSPEDP ALRHILDGGS GAIMEHPGEE SPGRKSTAED
bmy_08717T0/1-833 EDLDLSSSES GTTVCSPEDP ALRHFLDGGS GAIMEHPGEE SPGRKSTVED
ENSTTRP00000011850/1-825 EDLDLSSSES GTTVCSPEDP ALRHFLDGGS GAIMEHPGEE SPGRKSTVED
BACU019950/1-746 EDLDLSSSES GTTVCSPEDP ALRHFLDGGS GAIMEHPGEE SPGRKSTVED
801 850
ENSP00000304108/1-826 FEANTSPTKR RGR-PPLAKR DSKTNIWKKR EERPLIPIN
ENSBTAP00000002209/1-752 FEANISPTKK RGRPPPLAKR DSKTNIWKKR EERPLIPIN
bmy_08717T0/1-833 FEANISPTKK RGR-PPLVKK DSKTNIWKKR EERPLIPIN
ENSTTRP00000011850/1-825 FEANISPTKK RGR-PPLVKK DSKTNIWKKR EERPLIPIN
BACU019950/1-746 FEANISPTKK RGR-PPLVKK DSKTNIWKKR EERPLIPIN