KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:02 2014 Check: 00 .. Name: bmy_11109T0/1-427 Len: 445 Check: 6591 Weight: 1.00 Name: ENSP00000020926/1-426 Len: 445 Check: 636 Weight: 1.00 Name: ENSBTAP00000002230/1-426 Len: 445 Check: 1568 Weight: 1.00 Name: BACU008936/1-433 Len: 445 Check: 5695 Weight: 1.00 Name: ENSTTRP00000012193/1-417 Len: 445 Check: 8084 Weight: 1.00 // 1 50 bmy_11109T0/1-427 MQRMARALTV THSSRAHSYL YSKLRSSTVI SVGGNRQEIL SWTNQSDL-- ENSP00000020926/1-426 MVLSVPVIAL GATLGTATSI LALCGVTCLC RHMHPKKGLL PRDQDPDLEK ENSBTAP00000002230/1-426 MVLSVPVIAL GATLGTATSI LALCGVTCLC RHMHPKKGVL QRDLEPDPEK BACU008936/1-433 MVLSVPVIAL GATLGTATSI LALCGVTCLC RHMHPKKGVL QRDLDPDPEK ENSTTRP00000012193/1-417 MVLSVPVIAL GATLGTATSI LALCGVTCLC RHMHPKKGVL QRDLDPDPEK 51 100 bmy_11109T0/1-427 --------CV QFNVKKSTEP VQPRALLKFP DIYGPRPAVT APEVINYADY ENSP00000020926/1-426 AKPSLLGSAQ QFNVKKSTEP VQPRALLKFP DIYGPRPAVT APEVINYADY ENSBTAP00000002230/1-426 AKPSVLRAAQ QFNVKKSTEP VQPRALLKFP DIYGPRPAVT APEVINYADY BACU008936/1-433 AKPGVLR-SQ QFNVKKSTEP VQPRALLKFP DIYGPRPAVT APEVINYADY ENSTTRP00000012193/1-417 AKPGVLR-SQ QFNVKKSTEP VQPRALLKFP DIYGPRPAVT APEVINYADY 101 150 bmy_11109T0/1-427 TLRTTEEPAA PASPQAPNDS RLKRQVTEEL LVLPQNGVVQ DVCVMETWNP ENSP00000020926/1-426 SLRSTEEPTA PASPQPPNDS RLKRQVTEEL FILPQNGVVE DVCVMETWNP ENSBTAP00000002230/1-426 TLKTTAEPAA PASPQAPNDS RLKRQVTEEL FVLPQNGVVE DVCVMETWNP BACU008936/1-433 TLRTTEEPAA PASPQAPNDS RLKRQVTEEL LVLAQNGVVQ DVCVMETWNP ENSTTRP00000012193/1-417 TLKTTAEPAA PASPQAPNDS RLKRQVTEEL FVLPQNGVVE DVCVMETWNP 151 200 bmy_11109T0/1-427 EKAARWNQAP KLHYRLDYDR QKAELFVTRL EGXFLADFHG LLSVTSDHDG ENSP00000020926/1-426 EKAASWNQAP KLHYCLDYDC QKAELFVTRL E--------- --AVTSNHDG ENSBTAP00000002230/1-426 EKAASWNQAP KLHYCLDYDR QKAELFVTRL E--------- --AVTSDHDG BACU008936/1-433 EKAARWNQAP KLHYRLDYDR QKAELFVTRL E--------- --AVTSDHDG ENSTTRP00000012193/1-417 EKAARWNQAP KLHYCLDYDR QKAELFVTHL E--------- --AVTSDHDG 201 250 bmy_11109T0/1-427 GCDCYIQGSV ANRMGSVEAQ TALKKRQLHT TWEEGLALPL AEGELPTATL ENSP00000020926/1-426 GCDCYVQGSV ANRTGSVEAQ TALKKRQLHT TWEEGLVLPL AEEELPTATL ENSBTAP00000002230/1-426 GCDCYVQGSV ANSMGSVEAQ TALKKRELHT MWEEGLVLPL AEEELPTATL BACU008936/1-433 GCDCYIQGSV ANKMGSVEAQ TALKKRQLHT TWEEGLALPL AEGELPTATL ENSTTRP00000012193/1-417 GCDCYIQGSV ANTMGSVEAQ TALKKRQLHT TWEEGLVLPL AEGELPTATL 251 300 bmy_11109T0/1-427 TLTLRTCDRF SRHSVAGELR LGLDGVSVPL GAAQWGELKT SVKEASAGTG ENSP00000020926/1-426 TLTLRTCDRF SRHSVAGELR LGLDGTSVPL GAAQWGELKT SAKEPSAGAG ENSBTAP00000002230/1-426 TLTLRTCDRF SRHSVVGELR LGLDGVSVPL GAAQWGELKT SVKEPSAGTG BACU008936/1-433 TLTLRTCDRF SRHSVAGELC LGLDGVSVPL GAAQWGELKT SVKEASAGTG ENSTTRP00000012193/1-417 TLTLRTCDRF SRHSVAGELR LGLDGVSVPL GSAQWGELKT SVKEPSAGTG 301 350 bmy_11109T0/1-427 EVLLSISYLP AANRLLVVLI KAKNLHANQS KELLGKDVSV KVTLKHQARK ENSP00000020926/1-426 EVLLSISYLP AANRLLVVLI KAKNLHSNQS KELLGKDVSV KVTLKHQARK ENSBTAP00000002230/1-426 EVLLSISYLP AANRLLVVLI KAKNLHSNQS KELLGKDVSV KVTLKHQARK BACU008936/1-433 EVLLSISYLP AANRLLVVLI KAKNLHANQS KELLGKDVSV KVTLKHQARK ENSTTRP00000012193/1-417 EVLLSISYLP AANRLLLVLI KAKNLHANQS KELLGKXXSV KVT-KHQARK 351 400 bmy_11109T0/1-427 LKKKQTKRAK HKINPVWNEM IMFELPDDLL RASSVELDVL GQGAEGQSCP ENSP00000020926/1-426 LKKKQTKRAK HKINPVWNEM IMFELPDDLL QASSVELEVL GQDDSGQSCA ENSBTAP00000002230/1-426 LKKKQTKRAK HKINPVWNEM IMFELPDDLL RASSVELDVL GLGAEGQSCV BACU008936/1-433 LKKKQTKRAK HKINPVWNEM IMFELPDDLL RASSVELDVL GQGAEGQSCP ENSTTRP00000012193/1-417 L--KQTKRAK HI--PVWNEM IM-ELPDDL- -RSSVELDVL GQGAEGQSCP 401 450 bmy_11109T0/1-427 LGRCSLGLHA SGSERSHWEE MLKNPRRQIA MWHQLHL--- ----- ENSP00000020926/1-426 LGHCSLGLHT SGSERSHWEE MLKNPRRQIA MWHQLHL--- ----- ENSBTAP00000002230/1-426 LGHCSLGLHA SGSERSHWEE MLKNPRRQIA MWHQLHL--- ----- BACU008936/1-433 LGRCSLGLHA SGSERSHWEE MLKNPRRQIA LWPPRAPSAA TGRRC ENSTTRP00000012193/1-417 LGRCSLGLHA SGSERSHWEE MLKNPRRQIA MWHQLRP--- -----