KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:04 2014 Check: 00 .. Name: ENSP00000323678/1-377 Len: 388 Check: 7195 Weight: 1.00 Name: ENSBTAP00000002256/1-308 Len: 388 Check: 2475 Weight: 1.00 Name: ENSTTRP00000012119/1-307 Len: 388 Check: 1069 Weight: 1.00 Name: bmy_02521T0/1-388 Len: 388 Check: 7454 Weight: 1.00 Name: BACU004412/1-239 Len: 388 Check: 2019 Weight: 1.00 // 1 50 ENSP00000323678/1-377 MLRLVPTGAR AIVDMSYARH FLDFQGSAIP QAMQKLVVTR LSPNFREAVT ENSBTAP00000002256/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012119/1-307 ---------- ---------- ---------- ---------- ---------- bmy_02521T0/1-388 MPQDTKACPG EVTHLPAERD VSTTVFPTSE THGLREQLDS MASKQTLGFA BACU004412/1-239 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000323678/1-377 LSRDCPVPLP G--------- --DGDLLVRN RFVGVNASDI NYSAGRYDPS ENSBTAP00000002256/1-308 ---------- ---------- ---------- RFVGVNASDI NYSAGRYDPS ENSTTRP00000012119/1-307 ---------- ---------- ---------- -FVGVNASDI NYSAGRYDPS bmy_02521T0/1-388 ISLYDKAQIT GISMSTGFSE RNQKTIRGWR GFVGVNASDI NYSAGRYDPS BACU004412/1-239 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000323678/1-377 VKPPFDIGFE GIGEVVALGL SASARYTVGQ AVAYMAPGSF AEYTVVPASI ENSBTAP00000002256/1-308 VKTPFDAGFE GVGEVVALGL SASAAFMVGQ AVAYMAPGSF AEYTVVPARV ENSTTRP00000012119/1-307 VKIPFDAGFE GVGEVVALGL SASATFTVGQ AVAYMTPGSF AEYTVVPAST bmy_02521T0/1-388 VKTPFDAGFE GVGEVVALGL SSSATFTVGQ AVAYMAPGSF AEYTVVPASM BACU004412/1-239 ---------- ---------- ---------- ---------- ---------M 151 200 ENSP00000323678/1-377 ATPVPSVKPE YLTLLVSGTT AYISLKELGG LSEGKKVLVT AAAGGTGQFA ENSBTAP00000002256/1-308 AIPVPGLKPE YLTLLVSGTT AYISLKELGG LSEGKKVLVT AAAGGTGQFA ENSTTRP00000012119/1-307 AIPVPAVKPE YLTLLVSGTT AYISLKELGE LSEGRKVLVT AAAGGTGQFA bmy_02521T0/1-388 AIPVPAMKPE YLTLLVSGTT AYISLKELGE LSEGRKVLVT AAAGGTGQFA BACU004412/1-239 AIPVPAVKPE YLTLLVSGTT AYISLKELGE LSEGRKVLVT AAAGGTGQFA 201 250 ENSP00000323678/1-377 MQLSKKAKCH VIGTCSSDEK SAFLKSLGCD RPINYKTEPV GTVLKQEYPE ENSBTAP00000002256/1-308 VQLAKKAKCH VIGTCSSAEK SAFLKSVGCD RPINYNTEHV GTVLRQEYPQ ENSTTRP00000012119/1-307 VQLAKKAECH VIGTCSSDEK SAFLKSLGCD RPINYNGEHV GAVLKQEYPR bmy_02521T0/1-388 VQLAKKAKCH VIGTCSSDEK SAFLKSLGCD RPINYNGEHV GAVLKQEYPQ BACU004412/1-239 VQLAKKAKCH VIGTCSSDEK SAFLKSLGCD RPINYNSERV GAVLKQEYPR 251 300 ENSP00000323678/1-377 GVDVVYESVG GAMFDLAVDA LATKGRLIVI GFISGYQTPT GLSPVKAGTL ENSBTAP00000002256/1-308 GVDVVYESVG GAMFDLAVDA LATRGRLIVI GFVSGYQTPT GLSPVKAGTL ENSTTRP00000012119/1-307 GVDVVYESVG GAMFDLAVDA LATKGRLIVI GFVSGYQTPT GLSPVKAVTL bmy_02521T0/1-388 GVDVVYESVG GAMFDLAVDA LATKGRLIVI GFVSGYQTPT GLSPVKAGTL BACU004412/1-239 GVDVVYESVG GAVFDLAVDA LATKGRLIVI GFVSGYQTPT GLSPVKAGTL 301 350 ENSP00000323678/1-377 PAKLLKKSAS VQGFFLNHYL SKYQAAMSHL LEMCVSGDLV CEVDLGDLSP ENSBTAP00000002256/1-308 PAKLLKKSAS VQGFFLNHYL PEFRGAMDHL LKMYAGGELV CEVDTGGLSA ENSTTRP00000012119/1-307 PAKLLKKSAS VQGFFLNHYL SKYRAAMDHL LKMYASGELV CKVDLGDLSA bmy_02521T0/1-388 PAKLLKKSAS VQGFFLNHYL SKYRAAMDHL LKMYASGELV CKVDLGGLSA BACU004412/1-239 PAKLLKKSAS VRGFFLNHYL SKYRAAMDHL LKMYASGELV CKVDLGGLSA 351 400 ENSP00000323678/1-377 EGRFTGLESI FRAVNYMYMG KNTGKIVVEL PHSVNSKL ENSBTAP00000002256/1-308 EGRFTGLESV FRAVDYMYMR KNTGKIVVEL PPSVNSKL ENSTTRP00000012119/1-307 EGRFTGLESV FRAVDYMYMR KNTGKIVVEL PHSVHSKL bmy_02521T0/1-388 EGRFTGLESV FRAVDYMYMR KNTGKIVVEL PHSVNSKL BACU004412/1-239 EGRFTGLESV FRAVDYMYMR KNTGKIVVEL PHSVNSKL