KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:05 2014 Check: 00 .. Name: ENSP00000362613/1-284 Len: 285 Check: 5123 Weight: 1.00 Name: ENSBTAP00000002260/1-285 Len: 285 Check: 6434 Weight: 1.00 Name: bmy_15875T0/1-221 Len: 285 Check: 3096 Weight: 1.00 Name: BACU012828/1-245 Len: 285 Check: 3239 Weight: 1.00 Name: ENSTTRP00000010291/1-282 Len: 285 Check: 5607 Weight: 1.00 // 1 50 ENSP00000362613/1-284 MYGSCLLEKE AGMYPGTLMS PGGDGTAGTG GTGGGGSPMP ASNFAAAPAF ENSBTAP00000002260/1-285 MYRSCLLEKE ADMYSSTLRS PAGGGTAGAG ATGDGGSPLP ASNFAAAPSY bmy_15875T0/1-221 MYRSCLLEKE TGMYSGTLRS PAGGGTAGAG ATGDGGSPMP ASNFAAAPSY BACU012828/1-245 ---------- ---------- ---------- --------MP ASNFAAAPSY ENSTTRP00000010291/1-282 MYRSCLLEKE TGMYSGTLRS PAGGGTAGAG ATGDGGSPMP ASNFAAAPSY 51 100 ENSP00000362613/1-284 SHYMGYPHMP SMDPHWPSLG VWGSPYSPPR EDWSVYPGPS STMGTVPVND ENSBTAP00000002260/1-285 AHYMGYPHMP GMDPHGPPLG AWGSPYSPPR EDWSVYPGPS STMGTVPMND bmy_15875T0/1-221 AHYMGYPHMP GMDPHGPSLG AWGSPYSPPR EDWSVYPGPS STMGTVPMND BACU012828/1-245 AHYMGYPHMP GMDPHGPSLG AWGSPYSPPR EDWSVYPGPS STMGTVPMND ENSTTRP00000010291/1-282 AHYMGYPHMP GMDPHGPSLG AWGSPYSPPR EDWSVYPGPS STMGTVPMND 101 150 ENSP00000362613/1-284 VTSSPAAFCS TDYSNLGPVG GGTSGSSLPG QAGGSLVPTD AGAAKAS-SP ENSBTAP00000002260/1-285 MSSSPAAFSS LEYSNLGPAG GGNSGSSLPT PAGGSLFPID AGIADADESS bmy_15875T0/1-221 MTSSPTAFGS PEYSNLEPAG GGNSGSSLPT PAGGSLFPID ACTADA--SS BACU012828/1-245 MTSSPAAFGS PEYSNLEPAG GGNSGSSLPT PAGGSLFPID ACTADA--SS ENSTTRP00000010291/1-282 MTSSPAAFGS PEYSNLN-AA GGNSGSSLPT PAGGSLFPID ACTADA--SS 151 200 ENSP00000362613/1-284 SRSRHSPYAW MRKTVQVTGK TRTKEKYRVV YTDHQRLELE KEFHCNRYIT ENSBTAP00000002260/1-285 SRSRHSPYAW MRKTVQVTGK TRTKEKYRVV YTDHQRLELE KEFHCNRYIT bmy_15875T0/1-221 NRSRHSPYAW MRKTVQVTGK TRTKEKYRVV YTDHQRLELE KEFHCNRYIT BACU012828/1-245 NRSRHSPYAW MRKTVQVTGK TRTKEKYRVV YTDHQRLELE KEFHCNRYIT ENSTTRP00000010291/1-282 NRSRHSPYAW MRKTVQVTGK TRTKEKYRVV YTDHQRLELE KEFHCNRYIT 201 250 ENSP00000362613/1-284 IQRKSELAVN LGLSERQVKI WFQNRRAKER KMIKKKISQF ENSGGSVQSD ENSBTAP00000002260/1-285 IRRKSELAVN LGLSERQVKI WFQNRRAKER KMIKKKISQF ENSGGSVQSD bmy_15875T0/1-221 IRRKSELAVN LGLSERQVH- ---------Q KYI------- ---------- BACU012828/1-245 IRRKSELAVN LGLSERQVKI WFQNRRAKER KMIKKKISQF ENSGGSVQSD ENSTTRP00000010291/1-282 IRRKSELAVN LGLSERQVKI WFQNRRAKER KMIKKKISQF ENSRGSVQSD 251 300 ENSP00000362613/1-284 SDSISPGELP NTFFTTPSAV RGFQPIEIQQ VIVSE ENSBTAP00000002260/1-285 SGSISPGELP NIFFTTPSAV RGFQPIEIQS LKISA bmy_15875T0/1-221 ---------- ---------- ---------- ----- BACU012828/1-245 SGSISPGELP NTFFTTPSAV RGFQPIEIPQ VIVSE ENSTTRP00000010291/1-282 SGSISPGELP NTFFTTPSAV RGFQPIEIPQ VIVSE