KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:17:05 2014  Check: 00 ..

 Name: ENSP00000394405/1-228     Len:    233  Check:  7272  Weight:  1.00
 Name: ENSBTAP00000002262/1-201  Len:    233  Check:  3556  Weight:  1.00
 Name: bmy_21560T0/1-214         Len:    233  Check:  612  Weight:  1.00
 Name: BACU001149/1-159          Len:    233  Check:  582  Weight:  1.00

//


                          1                                                   50
ENSP00000394405/1-228     MSRERGSRSE EPGAGNRESG SREPGLAAAA MSTVDLARVG ACILKHAVTG 
ENSBTAP00000002262/1-201  ---------- ---------- ---------- MSTVDLARVG ACVLKHAVTG 
bmy_21560T0/1-214         ---------- -------MES QAELKSDLQK NPPLPPPRSS TPAQPPPTRV 
BACU001149/1-159          ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000394405/1-228     EAVELRSLWR EHACVVAGLR RFGCVVCRWI AQDLSSLAGL LDQHGVRLVG 
ENSBTAP00000002262/1-201  EAVELRNLWQ EQACVVAGLR RFGCMVCRWI ARDLSNLKGL LDQHGVRLVG 
bmy_21560T0/1-214         RAVELRSLWQ EQACVVAGLR RFGCMVCRWI ARDLSSLKGL LDQHGVRLVG 
BACU001149/1-159          ---------- ---------- ----MVCRWI ARDLSSLKGL LDQHGVRLVG 


                          101                                                150
ENSP00000394405/1-228     VGPEALGLQE FLDGDYFAGE LYLDESKQLY KELGFKRYNS LSILPAALGK 
ENSBTAP00000002262/1-201  VGPEALGLQE FLDGGYFAGE LYLDESKQFY KELGFKRYNS LSILPAALGK 
bmy_21560T0/1-214         VGPEALGLQE FLDGGYFAGD LYLDESKQFY KELGFKRYNS LSILPAALGK 
BACU001149/1-159          VGPEALGLQE FLDGGYFAGE LYLDESKQFY KELGFKRYNS LSILPAALGK 


                          151                                                200
ENSP00000394405/1-228     PVRDVAAKAK AVGIQGNLSG DLLQSGGLLV VSKGGDKVLL HFVQKSPGDY 
ENSBTAP00000002262/1-201  PVREVAAKAK AVGIQGNLSG DLLQSGGLLV VAKGGDKVLL HFVQKSPGDY 
bmy_21560T0/1-214         PVRDVAAKAK AVGIQGNLSG DLLQSGGLLV VAKGGDKVLL HFVQKSPGDY 
BACU001149/1-159          PVRDVAAKAK AVGIQGNLSG DLLQSGGLLV VAKGGDKVLL HFVQKSPGDY 


                          201                                                250
ENSP00000394405/1-228     VPKEHILQVL GISAEVCASD PPQCDREV-- --- 
ENSBTAP00000002262/1-201  APLESILQAL GISAEVGPSE PPQCDEEACS R-- 
bmy_21560T0/1-214         APQESILQAL GISVEVCTSE PPKCDEEACS R-- 
BACU001149/1-159          APQESILQAL GISAEVCTSE PPKVSPGLGR APH