KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:12 2014 Check: 00 .. Name: ENSP00000002165/1-467 Len: 470 Check: 2344 Weight: 1.00 Name: ENSBTAP00000002297/1-468 Len: 470 Check: 2408 Weight: 1.00 Name: ENSTTRP00000002478/1-462 Len: 470 Check: 8432 Weight: 1.00 Name: bmy_02150T0/1-463 Len: 470 Check: 6662 Weight: 1.00 Name: BACU003657/1-286 Len: 470 Check: 2650 Weight: 1.00 // 1 50 ENSP00000002165/1-467 ---MRPQELP RLAFPLLLLL LLLLPPPPCP AHSATRFDPT WESLDARQLP ENSBTAP00000002297/1-468 CEAMRAPKLP GPALPLLILV LLL--PPPGS AGGPAPFDPT WESLDARQLP ENSTTRP00000002478/1-462 ---MRSPKLP GLVLSLLLLL -----PPPGP VGGAARFDPT WESLDARQLP bmy_02150T0/1-463 ---MRSPKLP GLVLPLLLLL L----PPPGP VGGAARFDPT WESLDARQLP BACU003657/1-286 ---MRSPKLP GLVLPLLLLL -----PPPGP VGGAARFDPT WESLDARQLP 51 100 ENSP00000002165/1-467 AWFDQAKFGI FIHWGVFSVP SFGSEWFWWY WQKEKIPKYV EFMKDNYPPS ENSBTAP00000002297/1-468 AWFDKAKFGI FIHWGVFSVP SFGSEWFWWY WQKEKIPAYV DFMKNNYPPD ENSTTRP00000002478/1-462 AWFDQAKFGI FIHWGVFSVP SFGSEWFWWY WQKEKLPSYV DFMKNNYPPD bmy_02150T0/1-463 AWFDQAKFGI FIHWGVFSVP SFGSEWFWWY WQKEKLPSYV DFMKNNYPPD BACU003657/1-286 AWFDQAKFGI FIHWGVFSVP SFGSEWF--- ---------- ---------- 101 150 ENSP00000002165/1-467 FKYEDFGPLF TAKFFNANQW ADIFQASGAK YIVLTSKHHE GFTLWGSEYS ENSBTAP00000002297/1-468 FTYEDFGPLF TAKFFDANQW ADILQASGAK YVVLTSKHHE GFTLWGSEYS ENSTTRP00000002478/1-462 FTYADFGPLF TAKFFDANQW ADILQASGAK YVVLTSKHHE GFTLWGSERS bmy_02150T0/1-463 FTYADFGPLF TAKFFDANKW ADILQASGAK YVVLTSKHHE GFTLWGSECS BACU003657/1-286 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000002165/1-467 WNWNAIDEGP KRDIVKELEV AIRNRTDLRF GLYYSLFEWF HPLFLEDESS ENSBTAP00000002297/1-468 WNWNAVDVGP KRDIIKELAV AVRNRTDLRF GLYYSLFEWF HPLFLEDESS ENSTTRP00000002478/1-462 WNWNAVDEGP KKDIVKELAV AVRTRTDLRF GLYYSLFEWF HPLFLEDESS bmy_02150T0/1-463 WNWNAVDEGP NRDIVKELAA AIRTRTDLRF GLYYSLFEWF HPLFLEDESS BACU003657/1-286 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000002165/1-467 SFHKRQFPVS KTLPELYELV NNYQPEVLWS DGDGGAPDQY WNSTGFLAWL ENSBTAP00000002297/1-468 LFQKRQYPVS KMLPELYELV NKYQPEVLWA DGDGGAPDTY WKSLDFLAWL ENSTTRP00000002478/1-462 SFQKQQYPLS KMLPELYELV NQYQPEVLWS DGDGGAPDTY WNSTVFLAWL bmy_02150T0/1-463 SFQKQQYPLS KMLPELYELV NQYQPEVLWS DGDGGAPDTY WNSTGFLAWL BACU003657/1-286 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000002165/1-467 YNESPVRGTV VTNDRWGAGS ICKHGGFYTC SDRYNPGHLL PHKWENCMTI ENSBTAP00000002297/1-468 YNESPVRDTV VTNDRWGAGS ICKHGGYYTC SDRYNPGHLL PHKWENCMTI ENSTTRP00000002478/1-462 YNESPVRDTV VTNDRWGAGS ICKHGGYYTC SDRYNPGHLL PHKWENCMTI bmy_02150T0/1-463 YNESPVRDTV VTNDRWGAGS ICKHGGYYTC SDRYNPGHLL PHKWENCMTI BACU003657/1-286 ---CPVRDTV VTNDRWGAGS ICKHGGYYTC SDRYNPGHLL PHKWENCMTI 301 350 ENSP00000002165/1-467 DKLSWGYRRE AGISDYLTIE ELVKQLVETV SCGGNLLMNI GPTLDGTISV ENSBTAP00000002297/1-468 DKFSWGYRRN AGIADYLTIE ELVKQLVQTV SCGGNLLMNI GPTQDGTISA ENSTTRP00000002478/1-462 DQFSWGYRRN AGISDYLTIE ELVKQLVETV SCGGNLLMNI GPTKDGTISA bmy_02150T0/1-463 DQFSWGYRRN AGISDYLTIE ELVKQLVETV SCGGNLLMNI GPTKDGIISA BACU003657/1-286 DQFSWGYRRN AGISDYLTIE ELVKQLVETV SCGGNLLMNI GPTKDGIISA 351 400 ENSP00000002165/1-467 VFEERLRQMG SWLKVNGEAI YETHTWRSQN DTVTPDVWYT SKPKEKLVYA ENSBTAP00000002297/1-468 IFKERLKQMG IWLKVNGEAI YETYAWRSQN DTVTPDVWYT SKPKDKLVYA ENSTTRP00000002478/1-462 IFEERLRQMG TWLKVNGEAI YDTHAWRSQN DTVTPEVWYT SKPKNKLVYA bmy_02150T0/1-463 IFEERLRQMG TWLKVNGEAI YDTHAWRSQN DTVTPDVWYT SKPKNKLVYA BACU003657/1-286 IFEERLRQMG TWLKVNGEAI YDTHAWRSQN DTVTPDVWYT SKPKNKLVYA 401 450 ENSP00000002165/1-467 IFLKWPTSGQ LFLGHPKAIL GATEVKLLGH GQPLNWISLE QNGIMVELPQ ENSBTAP00000002297/1-468 MFLKWPISGQ LFLAQPKATL GATKVKLLGH GQPLHWTPLK ENGIKVDLPQ ENSTTRP00000002478/1-462 MFLKWPTSGQ LFLGQPKATL GATEVELLGH GQPLQWTPLE QNGIMVELPQ bmy_02150T0/1-463 MFLKWPTSGQ LFLGQPKATL GATEVELLGH GQPLQWTPLE QNGIMVELPH BACU003657/1-286 MFLKWPTSGQ LFLGQPKATL GATEVELLGH GQPLQWTPLE QNGIMVELPQ 451 500 ENSP00000002165/1-467 LTIHQMPCKW GWALALTNVI ENSBTAP00000002297/1-468 LTIHQMPCQW GWALALTNVT ENSTTRP00000002478/1-462 LTVHQMPCKW GWALALTNVT bmy_02150T0/1-463 LTVHQMPCKW GWALALTNVT BACU003657/1-286 LTVHQMPCKW GWALALTNVT